Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0047g00260.t01
CDS Infomation

cds chromosome:12X:13:15965791:15968927:1 gene:VIT_13s0047g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGACAGGAAACAAGGAGACTTTTAGATGAATATGAAGTATCAGACGTTCTGGGGAGA
GGAGGATTCTCAGTTGTGAGAAGGGGTACAAGGAAATCAAGTAGTGGTGAAAACCCTGTA
GCCATCAAGACGCTGAAAAGGTGTGGACAAACGAATCTACCAGGACTCCCCCGTAACCGT
GGCAGCGAGAAACGTGTGGCGTCGATGGCATTCCCTACATGGAAACAGGTGTCGATTTCA
GATGCATTACTGACAAATGAAATCTTGGTTATGAGGAAAATAGTGGAACATGTTTCACCG
CACCCCAATGTGATCAACCTCCACGACGTGTATGAGGACCCAAGCGGGGTTCACCTTGTG
CTTGAGCTTTGTTCCGGGGGAGAGCTGTTTGATCGGATCGTGGCACAGGCGAGGTACTCA
GAGGCTGGCGCTGCAGCTGTGGTTAAGCAGCTTGCAGAAGGGCTAAAGGCGCTACACCAG
GCCAATATTATCCATAGAGACTTGAAGCCTGAGAATTGTCTATTCTTGGACAAAAGTGAG
GATGCTACTTTGAAGATCATGGACTTTGGGCTGAGTTCTGTGGAGGAATTCACAGATCCA
GTTGTGGGGTTGTTCGGTTCCATAGACTATGTGTCGCCAGAAGTTCTTTCTCAGGGCAAA
ATCTCATCTGCAAGTGATATGTGGTCTTTGGGAGTGATCTTGTATATTCTCCTCTCTGGG
TATCCACCTTTCATCGCACAGTCAAATCGGCAGAAACAGCAAATGATAATAGCTGGAGAC
TTCAGCTTCTATGAGAAGACCTGGAAGAACATTTCTTCATCAGCAAAGCAATTAATTTCC
AGTCTCCTCACAGTTGATCCTGAGAGGAGACCTACAGCTCACCAACTCCTCCAGCATCCA
TGGGTCATGGGAGATTCTGCCAAGCAGGATCAAATGGATGCAGAGATTGTTTCACGACTG
CAGAGTTTTAATGCCCGGCGCAAATTCCGTGCTGCTGCAATTGCAAGTGTGTGGAGTAGC
ACGGTGTTCTTGAGAACAAAGAAGCTGAAAACTTTAGTAGGGTCCCATGACCTTACCCAG
GAGGAACTTGAGAACCTGAGGATACATTTTAAGGAAATATGCTTAAAAGGCGACAATGCC
ACTCTATCTGAATTTGAGCAGGTGCTAAAAGCAATGAACATGTCATCACTAATTCCTCTG
GCAGGCCGCATCTTTGATCTATTTGACAACAACCGAGATGGCACAGTTGACATGAGAGAG
ATACTCTGTGGGTTCTCCAGCCTCAGAAATTCACAAGGAGACGATGCTCTACGCTTGTGC
TTCCAGATGTATGACACCGACAGGTCTGGATGCATTACCAAGGAAGAAGTAGCATCCATG
CTCAGAGCTTTGCCAGATGACTGTCTTCCAGCAGATATCACAGAACCAGGGAAATTAGAT
GAGATATTTGACCTGATGGATGCCAACAGCGATGGAAAAGTCACCTTTGAAGAGTTCAAA
ACAGCCATGCAGAGAGATAGCTCCCTCCAAGATGTAGTCCTCTCCTCTCTCCGCCCACTA
TAG

Peptide Sequence

PEP ID

VIT_13s0047g00260.t01
PEP Infomation

pep chromosome:12X:13:15965791:15968927:1 gene:VIT_13s0047g00260 transcript:VIT_13s0047g00260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGQETRRLLDEYEVSDVLGRGGFSVVRRGTRKSSSGENPVAIKTLKRCGQTNLPGLPRNR
GSEKRVASMAFPTWKQVSISDALLTNEILVMRKIVEHVSPHPNVINLHDVYEDPSGVHLV
LELCSGGELFDRIVAQARYSEAGAAAVVKQLAEGLKALHQANIIHRDLKPENCLFLDKSE
DATLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEVLSQGKISSASDMWSLGVILYILLSG
YPPFIAQSNRQKQQMIIAGDFSFYEKTWKNISSSAKQLISSLLTVDPERRPTAHQLLQHP
WVMGDSAKQDQMDAEIVSRLQSFNARRKFRAAAIASVWSSTVFLRTKKLKTLVGSHDLTQ
EELENLRIHFKEICLKGDNATLSEFEQVLKAMNMSSLIPLAGRIFDLFDNNRDGTVDMRE
ILCGFSSLRNSQGDDALRLCFQMYDTDRSGCITKEEVASMLRALPDDCLPADITEPGKLD
EIFDLMDANSDGKVTFEEFKTAMQRDSSLQDVVLSSLRPL

Transcript Sequence

Transcript ID

VIT_13s0047g00260.t01
Transcript Infomation

cdna chromosome:12X:13:15965791:15968927:1 gene:VIT_13s0047g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAACAAGTCTGCCTTCTTCCTTCACTCTTTCCCTGCAAATTCTTGATCCTCCGACGATCT
CTGCTGGTTTCTTGGAGAATCCATTGTCATGGGACAGGAAACAAGGAGACTTTTAGATGA
ATATGAAGTATCAGACGTTCTGGGGAGAGGAGGATTCTCAGTTGTGAGAAGGGGTACAAG
GAAATCAAGTAGTGGTGAAAACCCTGTAGCCATCAAGACGCTGAAAAGGTGTGGACAAAC
GAATCTACCAGGACTCCCCCGTAACCGTGGCAGCGAGAAACGTGTGGCGTCGATGGCATT
CCCTACATGGAAACAGGTGTCGATTTCAGATGCATTACTGACAAATGAAATCTTGGTTAT
GAGGAAAATAGTGGAACATGTTTCACCGCACCCCAATGTGATCAACCTCCACGACGTGTA
TGAGGACCCAAGCGGGGTTCACCTTGTGCTTGAGCTTTGTTCCGGGGGAGAGCTGTTTGA
TCGGATCGTGGCACAGGCGAGGTACTCAGAGGCTGGCGCTGCAGCTGTGGTTAAGCAGCT
TGCAGAAGGGCTAAAGGCGCTACACCAGGCCAATATTATCCATAGAGACTTGAAGCCTGA
GAATTGTCTATTCTTGGACAAAAGTGAGGATGCTACTTTGAAGATCATGGACTTTGGGCT
GAGTTCTGTGGAGGAATTCACAGATCCAGTTGTGGGGTTGTTCGGTTCCATAGACTATGT
GTCGCCAGAAGTTCTTTCTCAGGGCAAAATCTCATCTGCAAGTGATATGTGGTCTTTGGG
AGTGATCTTGTATATTCTCCTCTCTGGGTATCCACCTTTCATCGCACAGTCAAATCGGCA
GAAACAGCAAATGATAATAGCTGGAGACTTCAGCTTCTATGAGAAGACCTGGAAGAACAT
TTCTTCATCAGCAAAGCAATTAATTTCCAGTCTCCTCACAGTTGATCCTGAGAGGAGACC
TACAGCTCACCAACTCCTCCAGCATCCATGGGTCATGGGAGATTCTGCCAAGCAGGATCA
AATGGATGCAGAGATTGTTTCACGACTGCAGAGTTTTAATGCCCGGCGCAAATTCCGTGC
TGCTGCAATTGCAAGTGTGTGGAGTAGCACGGTGTTCTTGAGAACAAAGAAGCTGAAAAC
TTTAGTAGGGTCCCATGACCTTACCCAGGAGGAACTTGAGAACCTGAGGATACATTTTAA
GGAAATATGCTTAAAAGGCGACAATGCCACTCTATCTGAATTTGAGCAGGTGCTAAAAGC
AATGAACATGTCATCACTAATTCCTCTGGCAGGCCGCATCTTTGATCTATTTGACAACAA
CCGAGATGGCACAGTTGACATGAGAGAGATACTCTGTGGGTTCTCCAGCCTCAGAAATTC
ACAAGGAGACGATGCTCTACGCTTGTGCTTCCAGATGTATGACACCGACAGGTCTGGATG
CATTACCAAGGAAGAAGTAGCATCCATGCTCAGAGCTTTGCCAGATGACTGTCTTCCAGC
AGATATCACAGAACCAGGGAAATTAGATGAGATATTTGACCTGATGGATGCCAACAGCGA
TGGAAAAGTCACCTTTGAAGAGTTCAAAACAGCCATGCAGAGAGATAGCTCCCTCCAAGA
TGTAGTCCTCTCCTCTCTCCGCCCACTATAG