Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0047g00200.t01
CDS Infomation

cds chromosome:12X:13:15625921:15637944:1 gene:VIT_13s0047g00200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAAATCATCAAACAACCATGGGGGAGAGGCTGAAGTTGCAGAGTCAAGTCATTTG
CAGCTATTGTCCGCCATTATTCCAAGCTCTGAGAGTGAGAGAATATCTCTCATCCATTCT
TACAATCATGCTTTCAAGGGCTTCTCTGCCATGCTCACACAGGGTGAAGCTTCTATACTC
TCTGGCCATGAGGAAATAGTATCTATCTTTCCAGATCCACTTCTTCAACTACATACTACA
AGATCTTGGGATTTCTTGAATGTGGAATCTGGAATTACATCAACTCCCTTATTTCATCAC
AACCTATCTAGGGATGTCATAATTGGGGTCATTGACACAGGGATATGGCCTGAGTCTCCA
AGTTTCAGTGACAATGGTATCGGAGAAATCCCTTCAAGATGGAAAGGAGTTTGCATGGAA
GGATCTGACTTCAAAAAATCCAACTGTAACAGGAAGCTGATAGGAGCAAGATACTACAAC
ACCCCAAAGGCCTTAATCCAACCAAAATCCAGCAGTAATAAGAGCCACCCCATTAACCTC
ACCGGCTCTCCAAGGGACTCAGTAGGCCATGGGACACATACTGCATCCATCGCAGCTGGT
GCACCCATCGCCAATGCTAGTTACTATGGTCTGGCTCCAGGTACTGCAAGGGGTGGCTCG
CCTTCCGCCAGGATTGCAAGCTACAAGGCTTGTTCGTTAGAAGGTTGTTCTGGTTCCACC
ATAATGAAAGCATTTGATGATGCAATTAAGGATGGAGTTGATATAATCTCAGTTTCCATT
GGGATGACCTCAATTTTTCAGTCAGACTTCCTTAATGACCCCATTGCTATAGGAGCTTTT
CATGCTCAGCAGATGGGGGTAATGGTGGTTTGCTCAGCAGGGAACAGCGGGCCTGATCCT
TACACCATTGTCAATTCAGCACCATGGATCTTTACCGTTGCAGCTTCTAATATTGATCGG
GATTTCCAATCTACTGTAGTTCTTGGAAATGGGAAAACTTTTCCAGGGCCTGCGATCAAC
TTCTCCAACCTTACTCGCTCTAAAACATATCCTCTTGCTCGTTCAGAGGATGTTGCTGCT
GCTTTTACCCCTTCATCAGATGCAAGGAGCTGCTATCCAGGATCATTAGATCCCAAGAAA
GTTAGGGGCAAGATAATTGTTTGTTCTGGTGATGGGTCTAATCCGAGGCGTATCCAAAAA
TTAGTTGTAGAAGATGCAAAAGCGATAGGGATGATTTTGATTGACGAGTATCAGAAAGGT
TCCCCCTTTGAATCAGGCATTTATCCCTTCACAGAAGTTGGAGATATTGCAGGGTTTCAT
ATTCTCAAGTACATTAATTCCACCAAGAATCCAACTGCAACCATCCTTCCAACAAAGGAA
GTTCCACGGATTAGGCCTGCACCAGTGGTTGCATTTTTCTCATCCAGAGGTCCAGGAGGG
CTTACAGAAAATATTCTCAAGCCTGATATAATGGCTCCAGGAGTTGCTATTTTAGCAGCC
ATGATTCCAAAGACAGAAGTGGGGAGTGTTCCAATTGGGAGGAAGGTATCAAAATTTGGC
ATACGATCTGGAACGTCCATGGCGTGCCCCCATGTAACGGGGGCAGCTGCATTCATCAAA
TCGGTGCACCCACAATGGAGTTCTTCTATGATCAGATCAGCACTCATGACAACAGCAATC
ATTTCTAATAACATGAGGAAAGATTTGACAAATAGCACAGGTTTCTCTGCCAATCCACAT
GAGATGGGAGTTGGAGAAATAAGCCCACTCAGGGCTCTCAATCCAGGATTAGTTTTTGAG
ACCGCTTCAGAAGATTATCTCCATTTCCTTTGTTATTATGGCTACCCAGAGAAAACTATA
AGAGCTGTGGCAAACAAAAAATTTACTTGTCCAAGCACTTCCTTTGATGAACTCATCTCC
AACATCAACTACCCATCCATCTCTATAAGCAAGCTGGACAGGCATCTAGCTGCTCAAACT
GTGACAAGGACTGTAAGGAATGTGGGATCCCCAAATTCAACCTACATTGCTCAACTGCAT
GCTCCAGTGGGACTGGAAATCACCGTCTCTCCTAAGAAGATAGTTTTTGTGGAAGGTTTA
GAGAGGGCAACCTTTAAAGTCTCATTCAAAGGAAAGGAAGCTTCAAGGGGTTACAGTTTT
GGATCTATAACATGGTTTGATGGTCTACATTCTGTTCGCACAGTCTTTGCGGTGAATGTG
GAATAA

Peptide Sequence

PEP ID

VIT_13s0047g00200.t01
PEP Infomation

pep chromosome:12X:13:15625921:15637944:1 gene:VIT_13s0047g00200 transcript:VIT_13s0047g00200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGKSSNNHGGEAEVAESSHLQLLSAIIPSSESERISLIHSYNHAFKGFSAMLTQGEASIL
SGHEEIVSIFPDPLLQLHTTRSWDFLNVESGITSTPLFHHNLSRDVIIGVIDTGIWPESP
SFSDNGIGEIPSRWKGVCMEGSDFKKSNCNRKLIGARYYNTPKALIQPKSSSNKSHPINL
TGSPRDSVGHGTHTASIAAGAPIANASYYGLAPGTARGGSPSARIASYKACSLEGCSGST
IMKAFDDAIKDGVDIISVSIGMTSIFQSDFLNDPIAIGAFHAQQMGVMVVCSAGNSGPDP
YTIVNSAPWIFTVAASNIDRDFQSTVVLGNGKTFPGPAINFSNLTRSKTYPLARSEDVAA
AFTPSSDARSCYPGSLDPKKVRGKIIVCSGDGSNPRRIQKLVVEDAKAIGMILIDEYQKG
SPFESGIYPFTEVGDIAGFHILKYINSTKNPTATILPTKEVPRIRPAPVVAFFSSRGPGG
LTENILKPDIMAPGVAILAAMIPKTEVGSVPIGRKVSKFGIRSGTSMACPHVTGAAAFIK
SVHPQWSSSMIRSALMTTAIISNNMRKDLTNSTGFSANPHEMGVGEISPLRALNPGLVFE
TASEDYLHFLCYYGYPEKTIRAVANKKFTCPSTSFDELISNINYPSISISKLDRHLAAQT
VTRTVRNVGSPNSTYIAQLHAPVGLEITVSPKKIVFVEGLERATFKVSFKGKEASRGYSF
GSITWFDGLHSVRTVFAVNVE

Transcript Sequence

Transcript ID

VIT_13s0047g00200.t01
Transcript Infomation

cdna chromosome:12X:13:15625921:15637944:1 gene:VIT_13s0047g00200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAAATCATCAAACAACCATGGGGGAGAGGCTGAAGTTGCAGAGTCAAGTCATTTG
CAGCTATTGTCCGCCATTATTCCAAGCTCTGAGAGTGAGAGAATATCTCTCATCCATTCT
TACAATCATGCTTTCAAGGGCTTCTCTGCCATGCTCACACAGGGTGAAGCTTCTATACTC
TCTGGCCATGAGGAAATAGTATCTATCTTTCCAGATCCACTTCTTCAACTACATACTACA
AGATCTTGGGATTTCTTGAATGTGGAATCTGGAATTACATCAACTCCCTTATTTCATCAC
AACCTATCTAGGGATGTCATAATTGGGGTCATTGACACAGGGATATGGCCTGAGTCTCCA
AGTTTCAGTGACAATGGTATCGGAGAAATCCCTTCAAGATGGAAAGGAGTTTGCATGGAA
GGATCTGACTTCAAAAAATCCAACTGTAACAGGAAGCTGATAGGAGCAAGATACTACAAC
ACCCCAAAGGCCTTAATCCAACCAAAATCCAGCAGTAATAAGAGCCACCCCATTAACCTC
ACCGGCTCTCCAAGGGACTCAGTAGGCCATGGGACACATACTGCATCCATCGCAGCTGGT
GCACCCATCGCCAATGCTAGTTACTATGGTCTGGCTCCAGGTACTGCAAGGGGTGGCTCG
CCTTCCGCCAGGATTGCAAGCTACAAGGCTTGTTCGTTAGAAGGTTGTTCTGGTTCCACC
ATAATGAAAGCATTTGATGATGCAATTAAGGATGGAGTTGATATAATCTCAGTTTCCATT
GGGATGACCTCAATTTTTCAGTCAGACTTCCTTAATGACCCCATTGCTATAGGAGCTTTT
CATGCTCAGCAGATGGGGGTAATGGTGGTTTGCTCAGCAGGGAACAGCGGGCCTGATCCT
TACACCATTGTCAATTCAGCACCATGGATCTTTACCGTTGCAGCTTCTAATATTGATCGG
GATTTCCAATCTACTGTAGTTCTTGGAAATGGGAAAACTTTTCCAGGGCCTGCGATCAAC
TTCTCCAACCTTACTCGCTCTAAAACATATCCTCTTGCTCGTTCAGAGGATGTTGCTGCT
GCTTTTACCCCTTCATCAGATGCAAGGAGCTGCTATCCAGGATCATTAGATCCCAAGAAA
GTTAGGGGCAAGATAATTGTTTGTTCTGGTGATGGGTCTAATCCGAGGCGTATCCAAAAA
TTAGTTGTAGAAGATGCAAAAGCGATAGGGATGATTTTGATTGACGAGTATCAGAAAGGT
TCCCCCTTTGAATCAGGCATTTATCCCTTCACAGAAGTTGGAGATATTGCAGGGTTTCAT
ATTCTCAAGTACATTAATTCCACCAAGAATCCAACTGCAACCATCCTTCCAACAAAGGAA
GTTCCACGGATTAGGCCTGCACCAGTGGTTGCATTTTTCTCATCCAGAGGTCCAGGAGGG
CTTACAGAAAATATTCTCAAGCCTGATATAATGGCTCCAGGAGTTGCTATTTTAGCAGCC
ATGATTCCAAAGACAGAAGTGGGGAGTGTTCCAATTGGGAGGAAGGTATCAAAATTTGGC
ATACGATCTGGAACGTCCATGGCGTGCCCCCATGTAACGGGGGCAGCTGCATTCATCAAA
TCGGTGCACCCACAATGGAGTTCTTCTATGATCAGATCAGCACTCATGACAACAGCAATC
ATTTCTAATAACATGAGGAAAGATTTGACAAATAGCACAGGTTTCTCTGCCAATCCACAT
GAGATGGGAGTTGGAGAAATAAGCCCACTCAGGGCTCTCAATCCAGGATTAGTTTTTGAG
ACCGCTTCAGAAGATTATCTCCATTTCCTTTGTTATTATGGCTACCCAGAGAAAACTATA
AGAGCTGTGGCAAACAAAAAATTTACTTGTCCAAGCACTTCCTTTGATGAACTCATCTCC
AACATCAACTACCCATCCATCTCTATAAGCAAGCTGGACAGGCATCTAGCTGCTCAAACT
GTGACAAGGACTGTAAGGAATGTGGGATCCCCAAATTCAACCTACATTGCTCAACTGCAT
GCTCCAGTGGGACTGGAAATCACCGTCTCTCCTAAGAAGATAGTTTTTGTGGAAGGTTTA
GAGAGGGCAACCTTTAAAGTCTCATTCAAAGGAAAGGAAGCTTCAAGGGGTTACAGTTTT
GGATCTATAACATGGTTTGATGGTCTACATTCTGTTCGCACAGTCTTTGCGGTGAATGTG
GAATAAATTCATTGCCTTTCAATTACAAGTCAGAATACTAAACATATCCTTTGTTTAAAA
TGCACTCTTCATTCAAAAGCATAACAAGTAATTTTATGCAAAATGAATAGCATTTTTCCA
CTGACATGGTAGGAAATGCAATTCAATGTAGATT