Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0047g00120.t01
CDS Infomation

cds chromosome:12X:13:15523318:15531894:-1 gene:VIT_13s0047g00120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGGAGGGTCAGGCCATGGCTTTGTGCCTCCTTCGGCTTCTTTTGATAAATCTCGA
GTTTTGGATATCAAGCCTTTGCGGAGTTTGGTTCCGGTGTTCCCTAATCCGCCCCAAGCG
CCCCCGTTTGTGTGTTCACCGCCCTTTGGGCCGTTCCCACCTGGGTTTACTCCATTTTAT
CCATTTAGCGTGGCGCAAGGGCCTCAGAGTTCACCTGAGTTGAACCAACACAAAACCCCA
ACTGGGGCTACCAATCATGAAACCCCAATATCAGCTTCTGCTAATTTGTTTAGGACTCCG
CCCCATTTTCCTGGGGTGGTGAATGGAGATGCGGAAACCTCCAGAGAATATGGTGTGCAA
TTTCTAAATGAAAATTCGAATATGGGGGTAAAACAGGATGGGTTCTTTGATGACCCAAAG
CGAGCAGCTCCTCATTTGCGCGCCTCCAATTCCTCTCGGAAGAAGGCTAAGAAAAGCAAA
GATGTGGATATTTCTTTAACAGTTGATAATGAGAAAGGATCAAGTAAGAATTTTGTTATG
AGATTTGACTCACTTCAATTGGATGATGGTAACAGGGAAATGGTGAATTATGTACTTATG
ACATTTGATGCACTTCGAAGAAGACTTAGTCAAATTGAAGAGGCTAAGGAATCACCTGGT
GGAGGTATTAAACGTGCAGATTTAAAAGCTGCCAATATTTTGATGAGCAAAGGGGTTCGG
ACAAACATGAGGAAGAGAATTGGAGTTACTCCTGGTGTTGAGGTTGGTGACATTTTCTTT
TTCCGGATGGAGATGTGTTTGGCTGGATTACATGCTCAATCTATGGCTGGGATTGACTAC
ATGTTTGTCAAGGGTGGTTTAGAAGAAGAGCCAGTGGCTGTAAGCATTGTCTCGTCAGGA
GGATATGATGATGATGCAGATGATGCCGATGTTTTGATCTATAGTGGCCAGGGTGGTAAT
GTAAACAGGAAAGATAAGCAAGTGGCTGATCAGAAGCTAGAAAGGGGCAATCTTGCTTTG
GATAGAAGCTTTCACCGAGCCAATGAAGTAAGAGTTATCCGAGGGGTGAAAGATGTAGTT
AATCCATTGTCAAAGGTCTATGTCTATGATGGTCTTTATACAATCCAGGAGTCATGGACA
GAGAAAGGGAAGTCTGGTTGCAATATGTTCAAATATAAATTGGTCAGAATACCTGGGCAG
CCTGGTGCTTTTGCTCATTGGAAATCAATTCAGAAATGGAAGGAAGGTTTCTCTTCAAGG
ATTGGACTTATTCTTCCAGACCTGACATCTGGGGCAGAAAGTATACCAGTTTCACTTGTA
AATGATGTTGATGATGAGAAGGGACCTGCTCATTTCACTTACTTTCCTACTCTCAGGTAT
TCAAAATCATTTAACTTAAAACACCCTTCTTTTGGTTGCAACTGCCAGAACGCATGCCTC
CCTGGTGATCTCAACTGCTCTTGCATTCGGAAAAATGGTGGTGATTTTCCATATACCTCC
AATGGGATTCTAGTTGCCAGGAGGCCATTAGTACATGAGTGTGGTCCCACATGCCCATGC
ATTCCTAACTGCAAGAACCGAATGTCCCAGACTGGTTTGAAAGTACGCCTAGAAGTGTTC
AAAACCAATAATAGAGGTTGGGGTCTCCGGTCATGGGATCCAATCCGCACTGGTACTTTT
ATTTGTGAATATGCAGGTGAAGTCTTGGACAAGGTTAAGGTTTATCAAGAGAGGGATGAA
GGTGAAAGCAATGAGTACCTCTTTGATACAACCCATGTTTATGACAATGCTTTCAAATGG
AATCATGAGCCTGGGTTACTGGATGAGGAGCCATCTGCTGAGCCTAATGAGTATTATGAT
ATCCCATCTCCTCTAATTATAAGTGCAAAATATGTTGGAAATGTAGCTCGATTTATGAAT
CATAGCTGCTCTCCTAATGTCTTTTGGCAGCCGGTTCTATATGAACACAACAATGAATCC
TTTCTCCATATTGCATTTTTTGCAATCAAACACATTCCTCCTATGACAGAGTTGACATAT
GATTATGGGATGTTGCAATCTGAAAATTATGAGGTCCAGAGTAACCATACTCCAAATGGG
AAGAAAAAATGCTTATGTGGATCGTCAAACTGCAGGGGCTATTATGGTTGA

Peptide Sequence

PEP ID

VIT_13s0047g00120.t01
PEP Infomation

pep chromosome:12X:13:15523318:15531894:-1 gene:VIT_13s0047g00120 transcript:VIT_13s0047g00120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDGGSGHGFVPPSASFDKSRVLDIKPLRSLVPVFPNPPQAPPFVCSPPFGPFPPGFTPFY
PFSVAQGPQSSPELNQHKTPTGATNHETPISASANLFRTPPHFPGVVNGDAETSREYGVQ
FLNENSNMGVKQDGFFDDPKRAAPHLRASNSSRKKAKKSKDVDISLTVDNEKGSSKNFVM
RFDSLQLDDGNREMVNYVLMTFDALRRRLSQIEEAKESPGGGIKRADLKAANILMSKGVR
TNMRKRIGVTPGVEVGDIFFFRMEMCLAGLHAQSMAGIDYMFVKGGLEEEPVAVSIVSSG
GYDDDADDADVLIYSGQGGNVNRKDKQVADQKLERGNLALDRSFHRANEVRVIRGVKDVV
NPLSKVYVYDGLYTIQESWTEKGKSGCNMFKYKLVRIPGQPGAFAHWKSIQKWKEGFSSR
IGLILPDLTSGAESIPVSLVNDVDDEKGPAHFTYFPTLRYSKSFNLKHPSFGCNCQNACL
PGDLNCSCIRKNGGDFPYTSNGILVARRPLVHECGPTCPCIPNCKNRMSQTGLKVRLEVF
KTNNRGWGLRSWDPIRTGTFICEYAGEVLDKVKVYQERDEGESNEYLFDTTHVYDNAFKW
NHEPGLLDEEPSAEPNEYYDIPSPLIISAKYVGNVARFMNHSCSPNVFWQPVLYEHNNES
FLHIAFFAIKHIPPMTELTYDYGMLQSENYEVQSNHTPNGKKKCLCGSSNCRGYYG

Transcript Sequence

Transcript ID

VIT_13s0047g00120.t01
Transcript Infomation

cdna chromosome:12X:13:15523318:15531894:-1 gene:VIT_13s0047g00120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAAAAAGGTTCCAATTTGAAATCACAGCTTTAGTAGGGATCGTTTTGTTGGTGGGTCAC
TCACAAGTGCACTGCAAGTGTACGTGTATTGTAAGTACTTGAATTAAACAGTCAGGTAGG
AATTTTGCCACAAGAGAAGAAAAAACCCATAAAGGGAAGAGGAAAGCCATAAAGGAGAAG
AAAAGAAAGCTTTTTGTTTGTTTGTTTGGTTGAAGGATTGGAAATGGATGGAGGGTCAGG
CCATGGCTTTGTGCCTCCTTCGGCTTCTTTTGATAAATCTCGAGTTTTGGATATCAAGCC
TTTGCGGAGTTTGGTTCCGGTGTTCCCTAATCCGCCCCAAGCGCCCCCGTTTGTGTGTTC
ACCGCCCTTTGGGCCGTTCCCACCTGGGTTTACTCCATTTTATCCATTTAGCGTGGCGCA
AGGGCCTCAGAGTTCACCTGAGTTGAACCAACACAAAACCCCAACTGGGGCTACCAATCA
TGAAACCCCAATATCAGCTTCTGCTAATTTGTTTAGGACTCCGCCCCATTTTCCTGGGGT
GGTGAATGGAGATGCGGAAACCTCCAGAGAATATGGTGTGCAATTTCTAAATGAAAATTC
GAATATGGGGGTAAAACAGGATGGGTTCTTTGATGACCCAAAGCGAGCAGCTCCTCATTT
GCGCGCCTCCAATTCCTCTCGGAAGAAGGCTAAGAAAAGCAAAGATGTGGATATTTCTTT
AACAGTTGATAATGAGAAAGGATCAAGTAAGAATTTTGTTATGAGATTTGACTCACTTCA
ATTGGATGATGGTAACAGGGAAATGGTGAATTATGTACTTATGACATTTGATGCACTTCG
AAGAAGACTTAGTCAAATTGAAGAGGCTAAGGAATCACCTGGTGGAGGTATTAAACGTGC
AGATTTAAAAGCTGCCAATATTTTGATGAGCAAAGGGGTTCGGACAAACATGAGGAAGAG
AATTGGAGTTACTCCTGGTGTTGAGGTTGGTGACATTTTCTTTTTCCGGATGGAGATGTG
TTTGGCTGGATTACATGCTCAATCTATGGCTGGGATTGACTACATGTTTGTCAAGGGTGG
TTTAGAAGAAGAGCCAGTGGCTGTAAGCATTGTCTCGTCAGGAGGATATGATGATGATGC
AGATGATGCCGATGTTTTGATCTATAGTGGCCAGGGTGGTAATGTAAACAGGAAAGATAA
GCAAGTGGCTGATCAGAAGCTAGAAAGGGGCAATCTTGCTTTGGATAGAAGCTTTCACCG
AGCCAATGAAGTAAGAGTTATCCGAGGGGTGAAAGATGTAGTTAATCCATTGTCAAAGGT
CTATGTCTATGATGGTCTTTATACAATCCAGGAGTCATGGACAGAGAAAGGGAAGTCTGG
TTGCAATATGTTCAAATATAAATTGGTCAGAATACCTGGGCAGCCTGGTGCTTTTGCTCA
TTGGAAATCAATTCAGAAATGGAAGGAAGGTTTCTCTTCAAGGATTGGACTTATTCTTCC
AGACCTGACATCTGGGGCAGAAAGTATACCAGTTTCACTTGTAAATGATGTTGATGATGA
GAAGGGACCTGCTCATTTCACTTACTTTCCTACTCTCAGGTATTCAAAATCATTTAACTT
AAAACACCCTTCTTTTGGTTGCAACTGCCAGAACGCATGCCTCCCTGGTGATCTCAACTG
CTCTTGCATTCGGAAAAATGGTGGTGATTTTCCATATACCTCCAATGGGATTCTAGTTGC
CAGGAGGCCATTAGTACATGAGTGTGGTCCCACATGCCCATGCATTCCTAACTGCAAGAA
CCGAATGTCCCAGACTGGTTTGAAAGTACGCCTAGAAGTGTTCAAAACCAATAATAGAGG
TTGGGGTCTCCGGTCATGGGATCCAATCCGCACTGGTACTTTTATTTGTGAATATGCAGG
TGAAGTCTTGGACAAGGTTAAGGTTTATCAAGAGAGGGATGAAGGTGAAAGCAATGAGTA
CCTCTTTGATACAACCCATGTTTATGACAATGCTTTCAAATGGAATCATGAGCCTGGGTT
ACTGGATGAGGAGCCATCTGCTGAGCCTAATGAGTATTATGATATCCCATCTCCTCTAAT
TATAAGTGCAAAATATGTTGGAAATGTAGCTCGATTTATGAATCATAGCTGCTCTCCTAA
TGTCTTTTGGCAGCCGGTTCTATATGAACACAACAATGAATCCTTTCTCCATATTGCATT
TTTTGCAATCAAACACATTCCTCCTATGACAGAGTTGACATATGATTATGGGATGTTGCA
ATCTGAAAATTATGAGGTCCAGAGTAACCATACTCCAAATGGGAAGAAAAAATGCTTATG
TGGATCGTCAAACTGCAGGGGCTATTATGGTTGACCATTAAGAAATGCACTCTGATGGAG
TCCACCAGATTAAAAGAAAGATGAACTAGGGCAACAAACTCCTCATGATCCTGTTTACTA
GTGCAGAATTACTGAGCAGGCGCATATCATCTCTTGGATTACCAGCACCAAACTTGGTTA
TAGCTAGGATTAGACCTGCAAGCTTTGGTTTCTAAAATTGTTGACAACTATTTAGCAAAG
TTAATTGGTGCTTAAAATATTAACTTGTAATACAGTAGATGGTTGTTTCTATCTATGAGA
ATAGCTGTTTTTAATTGCTCTTATAATGGGTTTTTTCTTGTAAGAGTCCAGTTGTCTGGG
ATTGTTAATACCAAAGCTTCCCAATGCTGTTTCATCAGGTCATGTATGTAGTTGATCAAA
TCTTGACCACCTTGATCGTGGGGTTTTAGGGAGCTTAATATATGTACAGGTTTAGGGTAC
TAATTTGGCCAATGTATATCACTCATCTCCTCCCTCCCCTTGGATTGGTCTTTTTGTATT
AATTCTTGACTAATGAAATCTATGACAAAAAGTTAATGAAA