Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0047g00040.t01
CDS Infomation

cds chromosome:12X:13:15356254:15363581:1 gene:VIT_13s0047g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTGCCTAAGGACATAGTTGGCAAGCAAATTGTTGATTCAGTCTATGGAGTTAGCCTC
CTTTTCCTCTCTTCATGGAGAAACTCATTCAATTCAGAGATACTGACTTATCATTGGTGG
CCAGATGCAAAGATAAGTGGACAAAGTTTCCTCTGCCTCAGAGAGCAGAGAGAGTATGGC
ATTTCATTGGAGAATGCTCCTGATTGGAGCCAGATCAAGCCCAATTATCAATTTGTACCT
TTTTTCTCTGGGTCATGTGCATTGCCGATATCATCTCTCTTTCCATTCCTTTATTTCATG
ATTAGGGACTTCCATATAGCAAAAAGAGAGGAAGACATTGGTTACTATGCTGGTTATGTG
GGGTCTGCATTTATGCTTGGAAGAGCATTGACATCTGTTGCCTGGGGAATGGTGGCTGAT
CGATATGGCCGAAAACCTGTTATAATGATAGGCACTATCACAGTGGTTATTTTCAACACT
CTTTTCGGTCTTAGTGTAAACTTCTGGATGGCCCTCTCTACAAGGTTTCTTCTTGGAAGT
CTGAATGGTGTACTTGGGCCAATTAAGGCATATGCAGCTGAAATTTTCCGTGACGAATAC
CAAGCTCTAGGACTGTCAACAGTTAGTACAGCAAGGGGCATAGGATTGATCATTGGACCA
GCTTTGGGAGGTTTCCTTGCCCAGCCTGCAGAAAAGTATCCGGATATATTCTCTGAAGAT
TCTCTATTTGGAAGATTTCCATACTTCTTGCCCTGCCTGTTTATATCAGTTTATGCAATG
ATTATAACCGTTGCTTGTTGTTGGCTTCCGGAAACATTGCACACACACAATGAAAACAAA
AAATCAAGAGAAGACTCATATGATGCTTTGGAAGGGGCCAATGGTGGGTCTAATGCAAAA
GAAAAAGAACAAGAAATTGAAGGAAGTGAACCAACTTCTAATGAAAGCCTCTTTATGAAT
TGGCCTTTGATGTCTTCTATCATTATCTACTGTGTTTTTTCACTACATGATATTGCTTAT
ATAGAGATATTCTCCTTATGGGCTGTGAGTCCTAGAATACATGGGGGTTTGAGCTATTCA
ACTGATGATGTTGGTGTTGTTCTTGCAATCTCAGGTTTTGGCCTTTTTGTCTCCCAAGTT
ACTCTATATCCACTTGTGGAGAGGTTTCTTGGGCCTGTGATGATCTGCCGCATTGCTGGT
GTCTTGTCCATACCTTTGTTGGCGAGTTACCCTTTAATAGCCATGCTTTCTGGGTCCACC
CTCTCAGTGGTGTTGAATTGTGCATCTGTGCTAAAGAATGTTCTATCTGTGTCCATTATA
ACTGGCATGTTCCTTCTGCAAAACAGTGCTGTGGACCAACACCAGAGAGGAACTGCTAAT
GGCATTTCTATGACTGCAATGTCTCTTTTCAAAGCAGCTGGTCCTGCTGGAGGAGGTGCA
CTCTTTTCTTGGGCACAAAAGCGACAGGATTCTGCTTTCTTCCCAGGTGACCAGATGGTT
TTCTTAATCCTGAATGTGGTCGAGGCAATCGGACTGCTCATGACATTCAAACCATTTCTA
GTTCAAAGGCGTCGATAG

Peptide Sequence

PEP ID

VIT_13s0047g00040.t01
PEP Infomation

pep chromosome:12X:13:15356254:15363581:1 gene:VIT_13s0047g00040 transcript:VIT_13s0047g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLPKDIVGKQIVDSVYGVSLLFLSSWRNSFNSEILTYHWWPDAKISGQSFLCLREQREYG
ISLENAPDWSQIKPNYQFVPFFSGSCALPISSLFPFLYFMIRDFHIAKREEDIGYYAGYV
GSAFMLGRALTSVAWGMVADRYGRKPVIMIGTITVVIFNTLFGLSVNFWMALSTRFLLGS
LNGVLGPIKAYAAEIFRDEYQALGLSTVSTARGIGLIIGPALGGFLAQPAEKYPDIFSED
SLFGRFPYFLPCLFISVYAMIITVACCWLPETLHTHNENKKSREDSYDALEGANGGSNAK
EKEQEIEGSEPTSNESLFMNWPLMSSIIIYCVFSLHDIAYIEIFSLWAVSPRIHGGLSYS
TDDVGVVLAISGFGLFVSQVTLYPLVERFLGPVMICRIAGVLSIPLLASYPLIAMLSGST
LSVVLNCASVLKNVLSVSIITGMFLLQNSAVDQHQRGTANGISMTAMSLFKAAGPAGGGA
LFSWAQKRQDSAFFPGDQMVFLILNVVEAIGLLMTFKPFLVQRRR

Transcript Sequence

Transcript ID

VIT_13s0047g00040.t01
Transcript Infomation

cdna chromosome:12X:13:15356254:15363581:1 gene:VIT_13s0047g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTGCCTAAGGACATAGTTGGCAAGCAAATTGTTGATTCAGTCTATGGAGTTAGCCTC
CTTTTCCTCTCTTCATGGAGAAACTCATTCAATTCAGAGATACTGACTTATCATTGGTGG
CCAGATGCAAAGATAAGTGGACAAAGTTTCCTCTGCCTCAGAGAGCAGAGAGAGTATGGC
ATTTCATTGGAGAATGCTCCTGATTGGAGCCAGATCAAGCCCAATTATCAATTTGTACCT
TTTTTCTCTGGGTCATGTGCATTGCCGATATCATCTCTCTTTCCATTCCTTTATTTCATG
ATTAGGGACTTCCATATAGCAAAAAGAGAGGAAGACATTGGTTACTATGCTGGTTATGTG
GGGTCTGCATTTATGCTTGGAAGAGCATTGACATCTGTTGCCTGGGGAATGGTGGCTGAT
CGATATGGCCGAAAACCTGTTATAATGATAGGCACTATCACAGTGGTTATTTTCAACACT
CTTTTCGGTCTTAGTGTAAACTTCTGGATGGCCCTCTCTACAAGGTTTCTTCTTGGAAGT
CTGAATGGTGTACTTGGGCCAATTAAGGCATATGCAGCTGAAATTTTCCGTGACGAATAC
CAAGCTCTAGGACTGTCAACAGTTAGTACAGCAAGGGGCATAGGATTGATCATTGGACCA
GCTTTGGGAGGTTTCCTTGCCCAGCCTGCAGAAAAGTATCCGGATATATTCTCTGAAGAT
TCTCTATTTGGAAGATTTCCATACTTCTTGCCCTGCCTGTTTATATCAGTTTATGCAATG
ATTATAACCGTTGCTTGTTGTTGGCTTCCGGAAACATTGCACACACACAATGAAAACAAA
AAATCAAGAGAAGACTCATATGATGCTTTGGAAGGGGCCAATGGTGGGTCTAATGCAAAA
GAAAAAGAACAAGAAATTGAAGGAAGTGAACCAACTTCTAATGAAAGCCTCTTTATGAAT
TGGCCTTTGATGTCTTCTATCATTATCTACTGTGTTTTTTCACTACATGATATTGCTTAT
ATAGAGATATTCTCCTTATGGGCTGTGAGTCCTAGAATACATGGGGGTTTGAGCTATTCA
ACTGATGATGTTGGTGTTGTTCTTGCAATCTCAGGTTTTGGCCTTTTTGTCTCCCAAGTT
ACTCTATATCCACTTGTGGAGAGGTTTCTTGGGCCTGTGATGATCTGCCGCATTGCTGGT
GTCTTGTCCATACCTTTGTTGGCGAGTTACCCTTTAATAGCCATGCTTTCTGGGTCCACC
CTCTCAGTGGTGTTGAATTGTGCATCTGTGCTAAAGAATGTTCTATCTGTGTCCATTATA
ACTGGCATGTTCCTTCTGCAAAACAGTGCTGTGGACCAACACCAGAGAGGAACTGCTAAT
GGCATTTCTATGACTGCAATGTCTCTTTTCAAAGCAGCTGGTCCTGCTGGAGGAGGTGCA
CTCTTTTCTTGGGCACAAAAGCGACAGGATTCTGCTTTCTTCCCAGGTGACCAGATGGTT
TTCTTAATCCTGAATGTGGTCGAGGCAATCGGACTGCTCATGACATTCAAACCATTTCTA
GTTCAAAGGCGTCGATAGAGGAAAATCAGTCTGATTCAACTCCAGGCCGTCAAGATTATC
ACCTCGATCAGTATGACTCTTTGGTAGCATTGCACCTGTCTCCATTCATTATGGGGACGA
TAACTTGCATCCTGTAGTAACCCGTTTGGGGGGTATATTAG