Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g05290.t01
CDS Infomation

cds chromosome:12X:13:7110799:7119629:-1 gene:VIT_13s0019g05290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATATTGACAATTGGCATTCAGAATTGGAATATGACCAGTGGTTACGACTCCCTGTA
TCAGGTCCCAGACCATCAGCTCGCTACAAGCATGCTGCAGCAGTGGTTGATGAAAAACTG
TATATTTCTGGTGGAAGTCGTAATGGTCGGTATCTATCTGATGTTCAGGTCTTTGATCTT
AGAAGTTTGGCATGGTCTGCTCTAAAACTGAAAATGGAATCGAATGCTGATAAAGTTGAA
GAAAATAACTTACAGGAAGTTTTTCCAGCCACCTCTGGTCACAATATGATTAAGTGGGGA
AACAAACTTCTTATACTTGGTGGTCATTCAAAGAATTCTTCTGATGGTGTAACAGTGAGG
GCTATTGATCTCGAAACACAACAGTGCGGTGTTATCAAGACCTCAGGAAAAGTTCCGGTG
GCTCGTGGGGGACAATCTGTAACACTGGTTGGCTCTAGATTGATAATGTTTGGTGGAGAA
GATAGGAGCAGACATCTGCTGAATGATGTCCATGTTCTTGATCTAGATACAATGACTTGG
GATGTGGTGGAGGCTACGCAGACACCTCCAGCTCCCAGATTTGATCATACAGCTGCAGTG
CATGCGGAGCGCTACCTTCTCATTTTTGGCGGTTGTTCGCATTCAATATTTTTCAATGAT
CTTCACATACTAGATTTGCAAACTATGGAGTGGTCCCAGCCACAAATCCAAGGCGATTTG
GTGACTCCTAGGGCAGGGCATGCTGGTACAACCATTGATGAAAACTGGTATATTGTTGGT
GGTGGAGATAATAGAAGTGGTACCCCAGAAACCCTTGTGTTTAATATGTCTAAGCTTGGC
TGGTCAGTGTTGACAAGGGTCAAGGAAAGGGATCCTCTTGCTAGTGAGGGCCTCAATGTT
TGCTCAGCATCAGTCAATGGAGAGAAGCATTTGGTCACTTTTGGTGGCTACAATGGCAAG
TATAATAATGAGGTATTCATTATGAAACCCAAGCCAACAGACTCAACACGCCCCAAGATA
TTTCAGTCACCCGCAGCAGCTGCTGCAGCAGCTTCTGTTACTGCTGCATATGCCTTGGCC
AAATCTGAAAAGTTGGATTTCATTGAAACAGAAGATTCAAACTTTGGGGGAGTAAAAGAA
AATAATTCTGCCCAGGATTTTAGTATTGAAATCAATGCAATTAGAGAAGAAAATAAAGTC
TTGGAATCTTCAGTTGCCGAAGTCAAAGCAGAAAATTCTAGGCTCAAGGAAAAGATTGAT
GACATCAATGGTACCTATGCTGAGTTGTCCAAGGAACTCCATTCGGTCCAAGGTCAACTG
GTAGTGGAAAGATCAAGATGCTCAAAACTGGAGGCACAAATTGCAGAACTGCAAAAGATG
CTAGAGACTTTGCAGTCCATAGAGGATGAGGTGCAATTACTCCGGCGCCAGAAATCTATG
TTGGAACGTAATATGGAGGTGGCAGCTGCTCAAAGACAAGGTTCTGGAGGTGTGTGGCGA
TGGATAGCTGGAACACCCAATACATAA

Peptide Sequence

PEP ID

VIT_13s0019g05290.t01
PEP Infomation

pep chromosome:12X:13:7110799:7119629:-1 gene:VIT_13s0019g05290 transcript:VIT_13s0019g05290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDIDNWHSELEYDQWLRLPVSGPRPSARYKHAAAVVDEKLYISGGSRNGRYLSDVQVFDL
RSLAWSALKLKMESNADKVEENNLQEVFPATSGHNMIKWGNKLLILGGHSKNSSDGVTVR
AIDLETQQCGVIKTSGKVPVARGGQSVTLVGSRLIMFGGEDRSRHLLNDVHVLDLDTMTW
DVVEATQTPPAPRFDHTAAVHAERYLLIFGGCSHSIFFNDLHILDLQTMEWSQPQIQGDL
VTPRAGHAGTTIDENWYIVGGGDNRSGTPETLVFNMSKLGWSVLTRVKERDPLASEGLNV
CSASVNGEKHLVTFGGYNGKYNNEVFIMKPKPTDSTRPKIFQSPAAAAAAASVTAAYALA
KSEKLDFIETEDSNFGGVKENNSAQDFSIEINAIREENKVLESSVAEVKAENSRLKEKID
DINGTYAELSKELHSVQGQLVVERSRCSKLEAQIAELQKMLETLQSIEDEVQLLRRQKSM
LERNMEVAAAQRQGSGGVWRWIAGTPNT

Transcript Sequence

Transcript ID

VIT_13s0019g05290.t01
Transcript Infomation

cdna chromosome:12X:13:7110799:7119629:-1 gene:VIT_13s0019g05290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGTCCTACAAATACTTGATATTGGAACAAAAGATATTAAGAAAGATATGGATATTGACAA
TTGGCATTCAGAATTGGAATATGACCAGTGGTTACGACTCCCTGTATCAGGTCCCAGACC
ATCAGCTCGCTACAAGCATGCTGCAGCAGTGGTTGATGAAAAACTGTATATTTCTGGTGG
AAGTCGTAATGGTCGGTATCTATCTGATGTTCAGGTCTTTGATCTTAGAAGTTTGGCATG
GTCTGCTCTAAAACTGAAAATGGAATCGAATGCTGATAAAGTTGAAGAAAATAACTTACA
GGAAGTTTTTCCAGCCACCTCTGGTCACAATATGATTAAGTGGGGAAACAAACTTCTTAT
ACTTGGTGGTCATTCAAAGAATTCTTCTGATGGTGTAACAGTGAGGGCTATTGATCTCGA
AACACAACAGTGCGGTGTTATCAAGACCTCAGGAAAAGTTCCGGTGGCTCGTGGGGGACA
ATCTGTAACACTGGTTGGCTCTAGATTGATAATGTTTGGTGGAGAAGATAGGAGCAGACA
TCTGCTGAATGATGTCCATGTTCTTGATCTAGATACAATGACTTGGGATGTGGTGGAGGC
TACGCAGACACCTCCAGCTCCCAGATTTGATCATACAGCTGCAGTGCATGCGGAGCGCTA
CCTTCTCATTTTTGGCGGTTGTTCGCATTCAATATTTTTCAATGATCTTCACATACTAGA
TTTGCAAACTATGGAGTGGTCCCAGCCACAAATCCAAGGCGATTTGGTGACTCCTAGGGC
AGGGCATGCTGGTACAACCATTGATGAAAACTGGTATATTGTTGGTGGTGGAGATAATAG
AAGTGGTACCCCAGAAACCCTTGTGTTTAATATGTCTAAGCTTGGCTGGTCAGTGTTGAC
AAGGGTCAAGGAAAGGGATCCTCTTGCTAGTGAGGGCCTCAATGTTTGCTCAGCATCAGT
CAATGGAGAGAAGCATTTGGTCACTTTTGGTGGCTACAATGGCAAGTATAATAATGAGGT
ATTCATTATGAAACCCAAGCCAACAGACTCAACACGCCCCAAGATATTTCAGTCACCCGC
AGCAGCTGCTGCAGCAGCTTCTGTTACTGCTGCATATGCCTTGGCCAAATCTGAAAAGTT
GGATTTCATTGAAACAGAAGATTCAAACTTTGGGGGAGTAAAAGAAAATAATTCTGCCCA
GGATTTTAGTATTGAAATCAATGCAATTAGAGAAGAAAATAAAGTCTTGGAATCTTCAGT
TGCCGAAGTCAAAGCAGAAAATTCTAGGCTCAAGGAAAAGATTGATGACATCAATGGTAC
CTATGCTGAGTTGTCCAAGGAACTCCATTCGGTCCAAGGTCAACTGGTAGTGGAAAGATC
AAGATGCTCAAAACTGGAGGCACAAATTGCAGAACTGCAAAAGATGCTAGAGACTTTGCA
GTCCATAGAGGATGAGGTGCAATTACTCCGGCGCCAGAAATCTATGTTGGAACGTAATAT
GGAGGTGGCAGCTGCTCAAAGACAAGGTTCTGGAGGTGTGTGGCGATGGATAGCTGGAAC
ACCCAATACATAAAAGTTGCTAGGTCAGTTCATCTACATTGAAATGGGCATTCAGCAGCC
CTACCTATTTCCCAAGCCACTGTAATAATAAGCAATATCTCTCAGAATCAGAACAATATG
TGCTCAAAGTTTCAGAGTATCAAAAACAAAGGGAGAAAATCTTGCAAGATTTGCTGAATC
TACAACCTAAATTAAGTTGCTTTAAGGAGATGAGATTAAACTGAGTAGCGGAATTATTTG
TCTATTGAGTCAAGTTGTGCCCTTTTTTCTTTTTGGAATCGTACAATTACTTACATGTTG
TAATTTGTGTTTGAGTATCTTTTTGCATGCTATATGATGG