Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g05180.t01
CDS Infomation

cds chromosome:12X:13:7007915:7010084:-1 gene:VIT_13s0019g05180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTCCCTGGACCCCTCGTCAATGCCTCCACCAATGATTTCATCCATGTGAACGTCTTC
AACAATTTGGATGAACCCCTGCTCCTGACATGGAATGGCATACAGCAGAGGCTAAACTCT
TGGCAAGATGGGGTGTCTGGCACAAACTGCCCAATCCAACCTGGTAAGAACTGGACTTAT
GTATTTCAGACCAAGGACCAAATTGGCACTTTCTTCTACTTCCCCTCCATCAACTTCCAA
AAGGCTGCGGGAGGATTCGGGCCTATTCGAGTCAACAATCGTATTGTGATCAATGTTCCC
TTCCCTAAGCCAGAAGCAGAGTTTGATCTTCTCATTGGTGATTGGTCGTACACCAGCTAC
AAGGATGCCAGGTCGCTCATACAGTCCAACAATACGCCAGGACACCTTAATCTTCCTGAT
TTTGTTCTAATGAATGGCAAAGGCCCTTATGGGTACCCGGGGATAGTCAACTATGAATCC
TTCACTGTGTCACAATGGAAGACATACCGGTTCAGGATATCAAACGTGGGAAACGAGTTG
AGTTTCAATTTCAGGATTCAGAACCATCAAATGGTTGTGGTTGAAACAGAAGGGTCTTAC
ACCCAGCAGATTACATTGGATTCTCTTGATGTCCATGTAGGCCAGTCCTACTCGGTTCTT
GTCACTGCCAATCAAAAGGAAGCAGACTATTACATTGTAGCAACTCCTAAAATGCTCAGC
ACTACAGATAACAGCAGCCTTGTGGGTAAAGGGGTACTACACTATGCCAACTCCAACACA
CCAGTAAGTGGTCCTTTGCCAAGTGGCCCTGATCCATTTGACCGAGCATTTTCGGTGGAT
CAAGCTAAATCCATTAGATGGAATATGACTGCTGGTGCAGCAAGGCCTAACCCACAAGGA
ACATTCAATGTATCCAATGTGACACTCTCGCAAACCTTCATCCTTCATGCATCAATGGCC
AACATCAGTGGCTTACCACGCTATGTGGTCAACAATGTGTCATACCTCACCCTGGACACA
CCATTAAAGCTGGCTGATCAGTTTGCTAATGGGTCTGACGTGTACCAGCTGGATCAATTC
CCAGTTCAGTCCGTGAAAGATGCTGCTGAATATGGAGTCTTCGTTTCCACCGGGAACCAC
AAAGGGTGGATAGAACTCGTGTTCAAGAATGATTTAGATGTCATGGATGCTTGGCATTTG
GATGGGTTCGGCTTCTATGTTGTTGGCTTCGGAGATGGGGATTGGCAGCCTGAACTGCGC
TCAACTTACAACCTTCTGGACCCTGTTGTCCGCTCCACCACGCAGGTGTACCCTGGAGGA
TGGACTGCAGTTTATGCATTCCTTGACAACCCAGGAATGTGGAACTTGAGATCACAGAAC
TTGAAGAATTGGTACCTGGGCCAAGAGCTCTACGTCAGGGTTTATGACCCAGATCCCAAC
CCCGCCAAGGAGCGCCCACCACCGGAAAATATCCTCCTATGTGGTCAGTACCTATCTACA
TCTTTTTCTTTACCATATGCTAGTCAATTCCCTCGCCTTAAGCTATATCTTTGGTTGGCT
GTTTACAGGAAAGTTTGA

Peptide Sequence

PEP ID

VIT_13s0019g05180.t01
PEP Infomation

pep chromosome:12X:13:7007915:7010084:-1 gene:VIT_13s0019g05180 transcript:VIT_13s0019g05180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFPGPLVNASTNDFIHVNVFNNLDEPLLLTWNGIQQRLNSWQDGVSGTNCPIQPGKNWTY
VFQTKDQIGTFFYFPSINFQKAAGGFGPIRVNNRIVINVPFPKPEAEFDLLIGDWSYTSY
KDARSLIQSNNTPGHLNLPDFVLMNGKGPYGYPGIVNYESFTVSQWKTYRFRISNVGNEL
SFNFRIQNHQMVVVETEGSYTQQITLDSLDVHVGQSYSVLVTANQKEADYYIVATPKMLS
TTDNSSLVGKGVLHYANSNTPVSGPLPSGPDPFDRAFSVDQAKSIRWNMTAGAARPNPQG
TFNVSNVTLSQTFILHASMANISGLPRYVVNNVSYLTLDTPLKLADQFANGSDVYQLDQF
PVQSVKDAAEYGVFVSTGNHKGWIELVFKNDLDVMDAWHLDGFGFYVVGFGDGDWQPELR
STYNLLDPVVRSTTQVYPGGWTAVYAFLDNPGMWNLRSQNLKNWYLGQELYVRVYDPDPN
PAKERPPPENILLCGQYLSTSFSLPYASQFPRLKLYLWLAVYRKV

Transcript Sequence

Transcript ID

VIT_13s0019g05180.t01
Transcript Infomation

cdna chromosome:12X:13:7007915:7010084:-1 gene:VIT_13s0019g05180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACAGGTTATAACGATTAATGGGATGTTCCCTGGACCCCTCGTCAATGCCTCCACCAATG
ATTTCATCCATGTGAACGTCTTCAACAATTTGGATGAACCCCTGCTCCTGACATGGAATG
GCATACAGCAGAGGCTAAACTCTTGGCAAGATGGGGTGTCTGGCACAAACTGCCCAATCC
AACCTGGTAAGAACTGGACTTATGTATTTCAGACCAAGGACCAAATTGGCACTTTCTTCT
ACTTCCCCTCCATCAACTTCCAAAAGGCTGCGGGAGGATTCGGGCCTATTCGAGTCAACA
ATCGTATTGTGATCAATGTTCCCTTCCCTAAGCCAGAAGCAGAGTTTGATCTTCTCATTG
GTGATTGGTCGTACACCAGCTACAAGGATGCCAGGTCGCTCATACAGTCCAACAATACGC
CAGGACACCTTAATCTTCCTGATTTTGTTCTAATGAATGGCAAAGGCCCTTATGGGTACC
CGGGGATAGTCAACTATGAATCCTTCACTGTGTCACAATGGAAGACATACCGGTTCAGGA
TATCAAACGTGGGAAACGAGTTGAGTTTCAATTTCAGGATTCAGAACCATCAAATGGTTG
TGGTTGAAACAGAAGGGTCTTACACCCAGCAGATTACATTGGATTCTCTTGATGTCCATG
TAGGCCAGTCCTACTCGGTTCTTGTCACTGCCAATCAAAAGGAAGCAGACTATTACATTG
TAGCAACTCCTAAAATGCTCAGCACTACAGATAACAGCAGCCTTGTGGGTAAAGGGGTAC
TACACTATGCCAACTCCAACACACCAGTAAGTGGTCCTTTGCCAAGTGGCCCTGATCCAT
TTGACCGAGCATTTTCGGTGGATCAAGCTAAATCCATTAGATGGAATATGACTGCTGGTG
CAGCAAGGCCTAACCCACAAGGAACATTCAATGTATCCAATGTGACACTCTCGCAAACCT
TCATCCTTCATGCATCAATGGCCAACATCAGTGGCTTACCACGCTATGTGGTCAACAATG
TGTCATACCTCACCCTGGACACACCATTAAAGCTGGCTGATCAGTTTGCTAATGGGTCTG
ACGTGTACCAGCTGGATCAATTCCCAGTTCAGTCCGTGAAAGATGCTGCTGAATATGGAG
TCTTCGTTTCCACCGGGAACCACAAAGGGTGGATAGAACTCGTGTTCAAGAATGATTTAG
ATGTCATGGATGCTTGGCATTTGGATGGGTTCGGCTTCTATGTTGTTGGCTTCGGAGATG
GGGATTGGCAGCCTGAACTGCGCTCAACTTACAACCTTCTGGACCCTGTTGTCCGCTCCA
CCACGCAGGTGTACCCTGGAGGATGGACTGCAGTTTATGCATTCCTTGACAACCCAGGAA
TGTGGAACTTGAGATCACAGAACTTGAAGAATTGGTACCTGGGCCAAGAGCTCTACGTCA
GGGTTTATGACCCAGATCCCAACCCCGCCAAGGAGCGCCCACCACCGGAAAATATCCTCC
TATGTGGTCAGTACCTATCTACATCTTTTTCTTTACCATATGCTAGTCAATTCCCTCGCC
TTAAGCTATATCTTTGGTTGGCTGTTTACAGGAAAGTTTGA