Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_13s0019g04910.t01
CDS Infomation	cds chromosome:12X:13:6603765:6608486:1 gene:VIT_13s0019g04910 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TM46]
Sequence	ATGCTTCCTAATACCTGCATTCTGCTATTATGCCTCCTCTGCTCTCTCTCCCCTCTTATC AGAGCCACTCTCAACCTCAATCTCACTCTCCCCCATCAGCACCCCAACCCTGAAGTTGTT GTTGACGAAGTTCAAAGGAGACTCAATGTATCCATATCGAGAAGACAAGTGCTCTCTGTA CAGGAAAACGATGGGTCGTCGTGTCTCACCGGTAACCCCGTTGACGACTGCTGGCGGTGC GACCCCAACTGGCAAAACAACCGGCAGCGCCTCGCCGACTGCGGCATTGGGTTCGGCCTA GACGCTATGGGCGGCAAGGGCGGTCAGTTCTATGTGGTCACCGACTCCTCCGACGAGGAC CCCATCAACCCCGCTCCGGGCACTCTCCGGCACGCTGTGATCCAGACTCAACCCCTGTGG ATTACCTTCTCCACCAACATGCTCATCAAACTCAAGTACGAGCTCATCGTCAACAGCTTC AAGACCATAGACGGGCGCGGAGCCAATGTGCACATCACCGGCAGGGGCTGCATGACCCTG CAGTACGTGAGCAACGTCATCATCCACGGCGTCCACGTTCACCACTGTGTGCCCTCTGGG AACGCCGACATCCGATCATCCCCCACACACGTGGGATGGCGTGGGAAATCGGACGGCGAC GGAATCTCCATATTTGGGTCGAGGAAGATCTGGATCGACCATTGCTCGCTGTCATACTGT AGGGATGGATTGATTGATGCAATAATGGGTTCGACCGGGATCACCATATCGAACAACTAC TTCTCCCATCATGACGAGGTGATGCTTTTAGGGCACGACGACAAGTACTCGCCGGACTCC GGGATGCAGGTGACAATAGCCTTCAACCACTTCGGTGAGGGGCTGGTGCAGCGTATGCCT CGCTGCCGGCGTGGCTACATCCACGTGGTCAACAACGACTTCACCCAGTGGGAGATGTAT GCCATTGGCGGCAGCGCCAACCCCACCATCAACAGCCAGGGTAATCGCTATACTGCGCCT GGGGACATCAACGCCAAGGAGGTGACAAAGCGCGTGGAGACAGACGAGGAGGATTGGGCA GAATGGAACTGGAGGACAGAAGGGGACGTAATGGTAAATGGAGCTTTCTTTGTGCCATCA GGGGTAGGGCTGAGCACTCAGTACGCCAAGGCTTCCAGTGTGGAGCCCAAGTCCGCCGCT CTCATTCAGCAGCTCACCATGAACGCCGGCGCCCTCAGTGGCTCCAGGGATGACTCCATG GGCGTATCGTATCCGGGGTTCAGCAGTGGGGGGACCAGCAGCAGCATAAGCAACAATGGT GGTCACGGGTCCAGCGATGATCCTGATTACTTTGGGATGATATTCGGGAGTGGGAGCGGG AGCGGCGCACCACCGCCACCCTCAGTTACAATCCCTATGTTTTTTTCTCTTTTAATTATC TTAATTTTGTACGTTACCATCAACCATGGTGGTGTATTATTATTTCTCTAA

Peptide Sequence

PEP ID	VIT_13s0019g04910.t01
PEP Infomation	pep chromosome:12X:13:6603765:6608486:1 gene:VIT_13s0019g04910 transcript:VIT_13s0019g04910.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TM46]
Sequence	MLPNTCILLLCLLCSLSPLIRATLNLNLTLPHQHPNPEVVVDEVQRRLNVSISRRQVLSV QENDGSSCLTGNPVDDCWRCDPNWQNNRQRLADCGIGFGLDAMGGKGGQFYVVTDSSDED PINPAPGTLRHAVIQTQPLWITFSTNMLIKLKYELIVNSFKTIDGRGANVHITGRGCMTL QYVSNVIIHGVHVHHCVPSGNADIRSSPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSYC RDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDKYSPDSGMQVTIAFNHFGEGLVQRMP RCRRGYIHVVNNDFTQWEMYAIGGSANPTINSQGNRYTAPGDINAKEVTKRVETDEEDWA EWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIQQLTMNAGALSGSRDDSM GVSYPGFSSGGTSSSISNNGGHGSSDDPDYFGMIFGSGSGSGAPPPPSVTIPMFFSLLII LILYVTINHGGVLLFL

Transcript Sequence

Transcript ID	VIT_13s0019g04910.t01
Transcript Infomation	cdna chromosome:12X:13:6603765:6608486:1 gene:VIT_13s0019g04910 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TM46]
Sequence	GTTCCTTTCTTCTTATTCTTCTTCGACAAATAAATTAAACCCACAAAACGCTGCGATTGC TTACATGGGTTTTGTATTTTTTTTTTATATTTGTTTTAAATTGATTTCACTATTTTAAAA TTATTTTTCTCTAAGAACTTCACGTTCTCCCAAAAATTGTAGCCTCCTGAGGTGCATTTC TACGGCGGAACGTCTCTTTCTGAGTCCTTTGCACAGCAGGAGGAAACGGGAGCAACAGTA ATCATATACCCATCGCCATTGTTGTTGTGCCAAGGATGCTTCCTAATACCTGCATTCTGC TATTATGCCTCCTCTGCTCTCTCTCCCCTCTTATCAGAGCCACTCTCAACCTCAATCTCA CTCTCCCCCATCAGCACCCCAACCCTGAAGTTGTTGTTGACGAAGTTCAAAGGAGACTCA ATGTATCCATATCGAGAAGACAAGTGCTCTCTGTACAGGAAAACGATGGGTCGTCGTGTC TCACCGGTAACCCCGTTGACGACTGCTGGCGGTGCGACCCCAACTGGCAAAACAACCGGC AGCGCCTCGCCGACTGCGGCATTGGGTTCGGCCTAGACGCTATGGGCGGCAAGGGCGGTC AGTTCTATGTGGTCACCGACTCCTCCGACGAGGACCCCATCAACCCCGCTCCGGGCACTC TCCGGCACGCTGTGATCCAGACTCAACCCCTGTGGATTACCTTCTCCACCAACATGCTCA TCAAACTCAAGTACGAGCTCATCGTCAACAGCTTCAAGACCATAGACGGGCGCGGAGCCA ATGTGCACATCACCGGCAGGGGCTGCATGACCCTGCAGTACGTGAGCAACGTCATCATCC ACGGCGTCCACGTTCACCACTGTGTGCCCTCTGGGAACGCCGACATCCGATCATCCCCCA CACACGTGGGATGGCGTGGGAAATCGGACGGCGACGGAATCTCCATATTTGGGTCGAGGA AGATCTGGATCGACCATTGCTCGCTGTCATACTGTAGGGATGGATTGATTGATGCAATAA TGGGTTCGACCGGGATCACCATATCGAACAACTACTTCTCCCATCATGACGAGGTGATGC TTTTAGGGCACGACGACAAGTACTCGCCGGACTCCGGGATGCAGGTGACAATAGCCTTCA ACCACTTCGGTGAGGGGCTGGTGCAGCGTATGCCTCGCTGCCGGCGTGGCTACATCCACG TGGTCAACAACGACTTCACCCAGTGGGAGATGTATGCCATTGGCGGCAGCGCCAACCCCA CCATCAACAGCCAGGGTAATCGCTATACTGCGCCTGGGGACATCAACGCCAAGGAGGTGA CAAAGCGCGTGGAGACAGACGAGGAGGATTGGGCAGAATGGAACTGGAGGACAGAAGGGG ACGTAATGGTAAATGGAGCTTTCTTTGTGCCATCAGGGGTAGGGCTGAGCACTCAGTACG CCAAGGCTTCCAGTGTGGAGCCCAAGTCCGCCGCTCTCATTCAGCAGCTCACCATGAACG CCGGCGCCCTCAGTGGCTCCAGGGATGACTCCATGGGCGTATCGTATCCGGGGTTCAGCA GTGGGGGGACCAGCAGCAGCATAAGCAACAATGGTGGTCACGGGTCCAGCGATGATCCTG ATTACTTTGGGATGATATTCGGGAGTGGGAGCGGGAGCGGCGCACCACCGCCACCCTCAG TTACAATCCCTATGTTTTTTTCTCTTTTAATTATCTTAATTTTGTACGTTACCATCAACC ATGGTGGTGTATTATTATTTCTCTAATGGAAGCTTAAAGAAAAGCAAATGATTTTAAAGG AACAGAAAAAAGAAAAAAAAAAAAAAA