Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_13s0019g04710.t01
CDS Infomation	cds chromosome:12X:13:6301141:6304957:1 gene:VIT_13s0019g04710 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HND8]
Sequence	ATGAGTCCGACGAAGGATTCGAATAAAATATCAGTACTGAATCAACTACTTGCGGTCGTG AAGGAGATTTCTGGGTTACCCGAGTGTAGAAACACCACCAAGAAGATGTATTACAATTTG GTGAGGAGGGTCAAGCTTTTGAGTCCTCTGTTTGAGGAATTGAAGGACAGCGAAGAGGAG CTCGAGGACAGCGAGATTCGAGCCTTTGAGTTGCTGAGAGTTGCTCTCGATTCCGCTATG GACCTTCTCAAATTGGTCAACGAAGGGAGTAAGCTTTATCAGGCTCTGCAAAGGGACAAA ATTGCAGATAAGTTTTGCCAAATGACAGATCAAATTGAAGCGTCGTTGAGCAGTATTCCT TATGATAAACTCAATGTATCAGAGGAAGTTCAAGAACAGATTGAGCTTGTTCATGCTCAA TTCAAAAGAGCGAAGGGAAGAACAGACTCACCTGATTTACAACTAGATAGGGATTTAGAA ATAGCACAGAAAGAAAAAGACCCTGATCCTGAAATTCTAAGAAGACTATCCGAAAACCTG CAACTCAGGACTATCAATGATTTGAAGAAAGAATCTCTGGCTTTGCATGAAATGGTTATC TCAAGTTCTGTAGATCCAGGGGACTGCTTTGCAAAGATGTCATCTCTGCTTAGAAAGCTC AAGGATTATGTATTAACAATAAACCCTGAAGCAGACACATCAGAGGGTGAAAAGGGCTTC ATCAAGCACAGATCTCCTGTTATCCCAGATGATTTCCGGTGCCCAATCTCTCTTGAACTG ATGAGAGATCCTGTTATAGTCTCTACTGGACAGACATATGAAAGATCCTGCATTCAAAAA TGGCTGGATGCAGGGCACAAGACCTGTCCTAAGACGCAGCAGACTCTGTTGCACACTGCC TTAACACCCAACTATGTTTTGAAGAGTTTAATTGCTTTATGGTGTGAGAGCAATGGCATT GAGCTCCCAAAAAATCAAGATAATTGTAGAAACAAGAAGACCGGAAAATTTGTTTCAGAC TGTGATAGACCCGCTATTCATGCCTTATTGCAGAAACTACTTGACGGGAATCCAGAAATA CAAAGAGCAGCAGCTGGTGAGCTCCGGTTGCTGGCAAAGAGGAATGCAGATAACAGAGTA TGCATTGCTGAGGCAGGAGCCATTCCTCGGCTTGTAGAACTACTATCCTCCACAGATCCC CGGACCCAAGAGCATGCTGTTACAGCACTTCTCAACCTCTCCATAAATGAGGCTAACAAG GGAAGTATTGTAATATCAGGAGCTATTCCAGATATAGTGGACGTTCTAAAAACTGGCAGC ATGGAAGCAAGAGAAAATGCTGCTGCAACCCTTTTCAGTTTATCGGTCATAGATGAGAAC AAGGTGATAATAGGAGCGGCTGGGGCTATCCCAGCTCTTATTGATCTGCTTTGTCAGGGA ACCCCAAGAGGAAAGAAGGATGCTGCCACTGCTATTTTTAACCTTGCTATCTATCAGGGA AACAAGGTGAGGGCTGTAAGGGCAGGGATTGTGGTGCCACTGATGAGATTCCTGAAGGAT GCTGGGGGTGGAATGGTGGATGAAGCACTGGCAATACTGGCTATTCTTGCCAGCCATCAA GAGGGAAAATTGGCTATTGGCCAGGCTGAGCCCTTCCCTGTTTTGGTGGAAGTGATAAAG ACAGGTTCGCCTCGTAATAGGGAGAATGCTGCAGCCGTTTTGTGGTCGTTGTGTACAGGT GATGCACAGCATTTGAAAATAGCAAGAGAGCTTGGGGCAGAAGAGGCATTGAAGGAGCTT TCAGAGAATGGCACTGATAGGGCCAAGAGAAAAGCTGGGAATATTTTAGAGCTTCTTCAA CGAGTTGAAGTTGTGGTCGACCCCTAA

Peptide Sequence

PEP ID	VIT_13s0019g04710.t01
PEP Infomation	pep chromosome:12X:13:6301141:6304957:1 gene:VIT_13s0019g04710 transcript:VIT_13s0019g04710.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HND8]
Sequence	MSPTKDSNKISVLNQLLAVVKEISGLPECRNTTKKMYYNLVRRVKLLSPLFEELKDSEEE LEDSEIRAFELLRVALDSAMDLLKLVNEGSKLYQALQRDKIADKFCQMTDQIEASLSSIP YDKLNVSEEVQEQIELVHAQFKRAKGRTDSPDLQLDRDLEIAQKEKDPDPEILRRLSENL QLRTINDLKKESLALHEMVISSSVDPGDCFAKMSSLLRKLKDYVLTINPEADTSEGEKGF IKHRSPVIPDDFRCPISLELMRDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTA LTPNYVLKSLIALWCESNGIELPKNQDNCRNKKTGKFVSDCDRPAIHALLQKLLDGNPEI QRAAAGELRLLAKRNADNRVCIAEAGAIPRLVELLSSTDPRTQEHAVTALLNLSINEANK GSIVISGAIPDIVDVLKTGSMEARENAAATLFSLSVIDENKVIIGAAGAIPALIDLLCQG TPRGKKDAATAIFNLAIYQGNKVRAVRAGIVVPLMRFLKDAGGGMVDEALAILAILASHQ EGKLAIGQAEPFPVLVEVIKTGSPRNRENAAAVLWSLCTGDAQHLKIARELGAEEALKEL SENGTDRAKRKAGNILELLQRVEVVVDP

Transcript Sequence

Transcript ID	VIT_13s0019g04710.t01
Transcript Infomation	cdna chromosome:12X:13:6301141:6304957:1 gene:VIT_13s0019g04710 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HND8]
Sequence	CTGCTGCTTCTTCTTCTTTCTTTGTTCGTACATCCATGGCCGATTGAAAATTTTCATTTC CTACGCTTCCCATCCTTAATCCTAGTACCGAAAACCCATAAAAATTCAATCGTTTCCCTT ATCTGGGTCTCTTCGATTCCTCCCGAATTCTCAATTTTCCTTGTCAAGGTTTTTGTTTTC CCCCCAATTTGAGGGCTCAATTTGGGGGTTTCCAACATGAGTCCGACGAAGGATTCGAAT AAAATATCAGTACTGAATCAACTACTTGCGGTCGTGAAGGAGATTTCTGGGTTACCCGAG TGTAGAAACACCACCAAGAAGATGTATTACAATTTGGTGAGGAGGGTCAAGCTTTTGAGT CCTCTGTTTGAGGAATTGAAGGACAGCGAAGAGGAGCTCGAGGACAGCGAGATTCGAGCC TTTGAGTTGCTGAGAGTTGCTCTCGATTCCGCTATGGACCTTCTCAAATTGGTCAACGAA GGGAGTAAGCTTTATCAGGCTCTGCAAAGGGACAAAATTGCAGATAAGTTTTGCCAAATG ACAGATCAAATTGAAGCGTCGTTGAGCAGTATTCCTTATGATAAACTCAATGTATCAGAG GAAGTTCAAGAACAGATTGAGCTTGTTCATGCTCAATTCAAAAGAGCGAAGGGAAGAACA GACTCACCTGATTTACAACTAGATAGGGATTTAGAAATAGCACAGAAAGAAAAAGACCCT GATCCTGAAATTCTAAGAAGACTATCCGAAAACCTGCAACTCAGGACTATCAATGATTTG AAGAAAGAATCTCTGGCTTTGCATGAAATGGTTATCTCAAGTTCTGTAGATCCAGGGGAC TGCTTTGCAAAGATGTCATCTCTGCTTAGAAAGCTCAAGGATTATGTATTAACAATAAAC CCTGAAGCAGACACATCAGAGGGTGAAAAGGGCTTCATCAAGCACAGATCTCCTGTTATC CCAGATGATTTCCGGTGCCCAATCTCTCTTGAACTGATGAGAGATCCTGTTATAGTCTCT ACTGGACAGACATATGAAAGATCCTGCATTCAAAAATGGCTGGATGCAGGGCACAAGACC TGTCCTAAGACGCAGCAGACTCTGTTGCACACTGCCTTAACACCCAACTATGTTTTGAAG AGTTTAATTGCTTTATGGTGTGAGAGCAATGGCATTGAGCTCCCAAAAAATCAAGATAAT TGTAGAAACAAGAAGACCGGAAAATTTGTTTCAGACTGTGATAGACCCGCTATTCATGCC TTATTGCAGAAACTACTTGACGGGAATCCAGAAATACAAAGAGCAGCAGCTGGTGAGCTC CGGTTGCTGGCAAAGAGGAATGCAGATAACAGAGTATGCATTGCTGAGGCAGGAGCCATT CCTCGGCTTGTAGAACTACTATCCTCCACAGATCCCCGGACCCAAGAGCATGCTGTTACA GCACTTCTCAACCTCTCCATAAATGAGGCTAACAAGGGAAGTATTGTAATATCAGGAGCT ATTCCAGATATAGTGGACGTTCTAAAAACTGGCAGCATGGAAGCAAGAGAAAATGCTGCT GCAACCCTTTTCAGTTTATCGGTCATAGATGAGAACAAGGTGATAATAGGAGCGGCTGGG GCTATCCCAGCTCTTATTGATCTGCTTTGTCAGGGAACCCCAAGAGGAAAGAAGGATGCT GCCACTGCTATTTTTAACCTTGCTATCTATCAGGGAAACAAGGTGAGGGCTGTAAGGGCA GGGATTGTGGTGCCACTGATGAGATTCCTGAAGGATGCTGGGGGTGGAATGGTGGATGAA GCACTGGCAATACTGGCTATTCTTGCCAGCCATCAAGAGGGAAAATTGGCTATTGGCCAG GCTGAGCCCTTCCCTGTTTTGGTGGAAGTGATAAAGACAGGTTCGCCTCGTAATAGGGAG AATGCTGCAGCCGTTTTGTGGTCGTTGTGTACAGGTGATGCACAGCATTTGAAAATAGCA AGAGAGCTTGGGGCAGAAGAGGCATTGAAGGAGCTTTCAGAGAATGGCACTGATAGGGCC AAGAGAAAAGCTGGGAATATTTTAGAGCTTCTTCAACGAGTTGAAGTTGTGGTCGACCCC TAAGATCCAAGCCTCATGCTTCCAAGAGTTTTTGTTATGTTGTGCTGCTGTTACAACAAC GACAGTGTAATTTATAAATAGATACTAAGAAATATGTGTACATACATATATAAACATATC AGTGTTTTGAATGAGAAGGTATGTCATTAAATCAATTGGGATGTTGAGATGTAGCATTGT CGCCAGAAGATGAGAACTCCAACCATTGAATAGCAAGAAAGACCAGTGATCTGTTCTACT CCAGAA