Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g04660.t01
CDS Infomation

cds chromosome:12X:13:6143145:6153687:-1 gene:VIT_13s0019g04660 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATAATTCAGTCTCGGATCACAGCTTCTACATTGAGAGTGATGAAGAGGATGAAGAG
AACATGTCCAACAGAGGCAATAATGATGGACATGATTCGGATTCCTCCCATTCTTCCACT
GAAATTGAGCAGCAGAACAAACCCAGTTCTTACAATACTTCATGGCCTCAAAGTTACAGG
CAATCTATTGATCTGTACAGTAGTGTACCGTCTCCAAGTATTGGGTTTTTGGGCACTCCG
TCCCTGTCAAGATTAGGCAGTTCATTTCTTTCCTCATCACTAACAAGGAGACACACACCT
GAAGTATTGTCTTCTTTGGTAAAACCTCTGCTGCCATCAGTAGCAGATGAGCAACAGGAG
CAACAAAGGCGTAGTTCTCATTCGTTGCTTCCCCCAATTCCATCAAGAAGGTCTTATATA
AAAAAGGCAGGTCTAGATCAAAAACCCCACAAGGTCTCACATGAAGTTCCAATTTCACGC
CAGAGCTCATATGGACAGGCTGTGCTAAATGGGATGAATATATTGTGTGGAGTCGGAATT
CTTTCTACTCCATATGCGGTGAAAGAAGGGGGATGGGTTGGACTATCAATACTGCTTATA
TTCGCATTGCTGTCATTCTACACTGGGATTCTCTTGCGTTACTGCTTGGATAGTGCTCCA
GGGCTTGAAACTTACCCAGACATTGGCCAAGCTGCATTTGGTACTACAGGCCGATTTGCC
ATCTCGATAATACTATACGTGGAACTCTATGCTTGTTGTGTTGAATATATAATTCTGGAG
AGTGATAATTTATCATCACTCTTTCCAAATGCCCATTTAAACTTCGGAGTCTTTCACTTA
GGTTCACACCATCTATTCGCATTGATGACCGCCCTGGCTGTTCTTCCTACTGTCTGGCTC
CGAGATCTCAGTGTTCTTAGTTACATCTCTGCTGGGGGAGTTGTTGCTTCGATATTGGTG
GTCCTCTGCTTGTTTTGGGTTGGCCTAGTAGATCAGGTTGGCTTTCAAAGTGAAGGGACT
GTACTGAACCTCACCAATCTTCCTGTTGCTATTGGTCTCTATGGCTACTGTTATTCAGGG
CATGCTGTTTTCCCAAACATCTATACTTCAATGGCAAAACCAAGCCAATACCCATCAGTA
CTCTTAATTAGCTTTGCTATTTGTACTCTCTTATATGCTGGAGTTGCTGTGTTGGGATAC
CAAATGTTTGGAGAATCAACATTATCACAATTCACTCTTAACATGCCCCAAGATTTGGTT
GCCTCTAAGATTGCAGTGTGGACAACGGTAGTTAACCCTTTTACCAAATATCCTTTTTCT
AATATAATTAGATTTTCAGCCACATATGCATTAACCATGTCTCCAGTAGCAATGAGTCTG
GAAGAGTTGATCCCTTCAAACCAATCCAAATCTCACATGTATGCAATCCTCATTAGAACA
GCCCTGGTGATCTCTACATTGCTTGTGGGCCTCACCGTTCCCTTCTTTGGTTTGGTGATG
GCATTGATTGGATCTTTGCTCACAATGCTTGTAACTTTAATACTTCCATGTGCTTGTTTC
CTAAGCATCTTGAGGGGAAAAATCACACGTTTTCAGGGATCACTCTGTATTCTGATTATT
GCAGTGGGCGTTGTGTCTTCAGCCTTTGGAACTTACTCTGCCCTTGCCAAAATTATTGAG
AAGTTGAGCTGA

Peptide Sequence

PEP ID

VIT_13s0019g04660.t01
PEP Infomation

pep chromosome:12X:13:6143145:6153687:-1 gene:VIT_13s0019g04660 transcript:VIT_13s0019g04660.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNNSVSDHSFYIESDEEDEENMSNRGNNDGHDSDSSHSSTEIEQQNKPSSYNTSWPQSYR
QSIDLYSSVPSPSIGFLGTPSLSRLGSSFLSSSLTRRHTPEVLSSLVKPLLPSVADEQQE
QQRRSSHSLLPPIPSRRSYIKKAGLDQKPHKVSHEVPISRQSSYGQAVLNGMNILCGVGI
LSTPYAVKEGGWVGLSILLIFALLSFYTGILLRYCLDSAPGLETYPDIGQAAFGTTGRFA
ISIILYVELYACCVEYIILESDNLSSLFPNAHLNFGVFHLGSHHLFALMTALAVLPTVWL
RDLSVLSYISAGGVVASILVVLCLFWVGLVDQVGFQSEGTVLNLTNLPVAIGLYGYCYSG
HAVFPNIYTSMAKPSQYPSVLLISFAICTLLYAGVAVLGYQMFGESTLSQFTLNMPQDLV
ASKIAVWTTVVNPFTKYPFSNIIRFSATYALTMSPVAMSLEELIPSNQSKSHMYAILIRT
ALVISTLLVGLTVPFFGLVMALIGSLLTMLVTLILPCACFLSILRGKITRFQGSLCILII
AVGVVSSAFGTYSALAKIIEKLS

Transcript Sequence

Transcript ID

VIT_13s0019g04660.t01
Transcript Infomation

cdna chromosome:12X:13:6143145:6153687:-1 gene:VIT_13s0019g04660 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTGCTTCTTCTCCTTCTTCTTCTCCTTCTCCTTCCTCTCTCTCAGATTTGGTTCTCCAT
AAACCATAACTGTATCTCTCATTTTTCATTCGCTTTCAGAGCTCTGATTGCACGTATGTA
TGATATCGTCGTTTCATTGTTTGCTATTTGAAAAATGAATTCGTAGAAGTTGAGAAGTTC
AGTTTTATAGCTTGCGGAGCAAGAATGAATTCGTATACCAGGGAGGGAGTAGGTGTTTGA
GGAAGTGTGCGGAATTGATTTGCAGAGGATTTGAACCGTAATCTCTTGTAAAGTAAGCTT
CCAAATTTTGAGGTGGTTCGGCAGTCCTATATATTGAAGAAACAAGGCGTTCTGAAGTGA
AAGATCAGAAACAAAATGAATAATTCAGTCTCGGATCACAGCTTCTACATTGAGAGTGAT
GAAGAGGATGAAGAGAACATGTCCAACAGAGGCAATAATGATGGACATGATTCGGATTCC
TCCCATTCTTCCACTGAAATTGAGCAGCAGAACAAACCCAGTTCTTACAATACTTCATGG
CCTCAAAGTTACAGGCAATCTATTGATCTGTACAGTAGTGTACCGTCTCCAAGTATTGGG
TTTTTGGGCACTCCGTCCCTGTCAAGATTAGGCAGTTCATTTCTTTCCTCATCACTAACA
AGGAGACACACACCTGAAGTATTGTCTTCTTTGGTAAAACCTCTGCTGCCATCAGTAGCA
GATGAGCAACAGGAGCAACAAAGGCGTAGTTCTCATTCGTTGCTTCCCCCAATTCCATCA
AGAAGGTCTTATATAAAAAAGGCAGGTCTAGATCAAAAACCCCACAAGGTCTCACATGAA
GTTCCAATTTCACGCCAGAGCTCATATGGACAGGCTGTGCTAAATGGGATGAATATATTG
TGTGGAGTCGGAATTCTTTCTACTCCATATGCGGTGAAAGAAGGGGGATGGGTTGGACTA
TCAATACTGCTTATATTCGCATTGCTGTCATTCTACACTGGGATTCTCTTGCGTTACTGC
TTGGATAGTGCTCCAGGGCTTGAAACTTACCCAGACATTGGCCAAGCTGCATTTGGTACT
ACAGGCCGATTTGCCATCTCGATAATACTATACGTGGAACTCTATGCTTGTTGTGTTGAA
TATATAATTCTGGAGAGTGATAATTTATCATCACTCTTTCCAAATGCCCATTTAAACTTC
GGAGTCTTTCACTTAGGTTCACACCATCTATTCGCATTGATGACCGCCCTGGCTGTTCTT
CCTACTGTCTGGCTCCGAGATCTCAGTGTTCTTAGTTACATCTCTGCTGGGGGAGTTGTT
GCTTCGATATTGGTGGTCCTCTGCTTGTTTTGGGTTGGCCTAGTAGATCAGGTTGGCTTT
CAAAGTGAAGGGACTGTACTGAACCTCACCAATCTTCCTGTTGCTATTGGTCTCTATGGC
TACTGTTATTCAGGGCATGCTGTTTTCCCAAACATCTATACTTCAATGGCAAAACCAAGC
CAATACCCATCAGTACTCTTAATTAGCTTTGCTATTTGTACTCTCTTATATGCTGGAGTT
GCTGTGTTGGGATACCAAATGTTTGGAGAATCAACATTATCACAATTCACTCTTAACATG
CCCCAAGATTTGGTTGCCTCTAAGATTGCAGTGTGGACAACGGTAGTTAACCCTTTTACC
AAATATCCTTTTTCTAATATAATTAGATTTTCAGCCACATATGCATTAACCATGTCTCCA
GTAGCAATGAGTCTGGAAGAGTTGATCCCTTCAAACCAATCCAAATCTCACATGTATGCA
ATCCTCATTAGAACAGCCCTGGTGATCTCTACATTGCTTGTGGGCCTCACCGTTCCCTTC
TTTGGTTTGGTGATGGCATTGATTGGATCTTTGCTCACAATGCTTGTAACTTTAATACTT
CCATGTGCTTGTTTCCTAAGCATCTTGAGGGGAAAAATCACACGTTTTCAGGGATCACTC
TGTATTCTGATTATTGCAGTGGGCGTTGTGTCTTCAGCCTTTGGAACTTACTCTGCCCTT
GCCAAAATTATTGAGAAGTTGAGCTGAAGTTGTTTTGAAAATTTTCCCTCCATTCCCTTG
CTTTTGAGTAGATGTTGGATGTTGTTTTTCATGCATCTCGTGATGTTTAATTTTATCTGT
ATCTGTTAAGGGTACTGATGAGCAATAAATAAAAGCCAAGCACCATTTGTAGCCTTTTTC
AA