Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g04550.t01
CDS Infomation

cds chromosome:12X:13:5986256:5987899:1 gene:VIT_13s0019g04550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAACGCCTCCTCCTCCGGCGCGATTCGATATCACCCCGGCAACATCTCCAGGTTGAA
TCCTCGGAGTTTGAGGGGGTTGTAGTGCCTCCCAATCCCATGTGCAAATCCAAAAGCAGC
ATCAGTGCAGTGGAGCCCAGTGTCAACCACGGCCGATCAGACACACCCAGAAGCTCCCGA
GTCACCAGGACGTCCAGGTCGTCTTCTTCTGCGACGGATCGCAGCAATTTTAATCTTCCC
ACCAATTACAACACCAGTGGGACTTCCAGGTCATCTGAGTCGACTCCCGCTTCGCTTTCT
TGCATCAGAGAGTCCTTGCCGGAGAATCCCCACGTCTACGACATCTCCGAAATCTGCTCC
GCCACCGGCAATTTTCTTGCCAAGAAGTTCTCCTCCTCCTCTTCCGCTTGGCGCTGCTCT
GTCCGCGGCAAAGACGTGGTCATCTTCCAACGAAAGCTCCGCCGCCCCATCGAGACTGCG
GAGATTCGCAAACTGCTGTCGGTGATTTGCAAAAGCCACCATGGGAGCTTGATCAAGCTC
CTCGGGGCTTCGATTTCTGGAAACCACATTTACCTCGTTTACGATTACGTTGATGGCGCT
AGCCTCGCAGATTGTCTCAGAAACCCTAGAAACCCTAATTTCACAGTTCTGTCGAATTGG
GTCTCGAGAATGCAGATCGCGGCGGACTTGGCTCACGGGCTTGACTACGTCCACCATTGC
ACTGGATTGGATGCGAGTTTTGTGCACAATCGTATCAGGAGTTCCAGCATTCTCGTGATT
AACGACTCGTTGAATGCCAAGATATGCCATTTCGGCACCGCACAACTCTGCGGCGAAATC
GCGGAAGGTACCGGAAAAAATTCAGGGTCCTCCCAATTGAAAAGATCGGGCAGTGCGGTG
ATGAAGATCGAGGGGACGAGAGGGTACATGGCACCGGAATTTCAGTTGACAGGATTGGCG
ACGCGGAAATCGGATGTGTATGCGTTTGGGGTGGTGATTTTGGAGATCTTATCTGGAGCA
GAGGCGTTGAAGTACATTGCGGACGATGAGAGTGGTACATATAAGAGAGTGAGCGTGATT
GAAACAGCTAGAGAGGCCATTGAAGCTGAAGGTGGCGGCGGCGGTGGTGGGGTGAGGAGG
TGGGTGGACAGCAGGCTCAAGGACTCGTATCCGGTGGAGGTGGCGGAGAAGATGGTGCGT
TTGGGTCTGGAGTGCGTGGAGGGGGATCCGGGTAAGAGGCCCAATATGAGTGAAGTAGCG
GCTCGAATTTCTAAGCTGTACTTAGAGTCCAAGAATTGGGCCGATCGAATAGGGATGCCT
ACCGATTTCTCTGTCTCAATGGCACCTCGATGA

Peptide Sequence

PEP ID

VIT_13s0019g04550.t01
PEP Infomation

pep chromosome:12X:13:5986256:5987899:1 gene:VIT_13s0019g04550 transcript:VIT_13s0019g04550.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKRLLLRRDSISPRQHLQVESSEFEGVVVPPNPMCKSKSSISAVEPSVNHGRSDTPRSSR
VTRTSRSSSSATDRSNFNLPTNYNTSGTSRSSESTPASLSCIRESLPENPHVYDISEICS
ATGNFLAKKFSSSSSAWRCSVRGKDVVIFQRKLRRPIETAEIRKLLSVICKSHHGSLIKL
LGASISGNHIYLVYDYVDGASLADCLRNPRNPNFTVLSNWVSRMQIAADLAHGLDYVHHC
TGLDASFVHNRIRSSSILVINDSLNAKICHFGTAQLCGEIAEGTGKNSGSSQLKRSGSAV
MKIEGTRGYMAPEFQLTGLATRKSDVYAFGVVILEILSGAEALKYIADDESGTYKRVSVI
ETAREAIEAEGGGGGGGVRRWVDSRLKDSYPVEVAEKMVRLGLECVEGDPGKRPNMSEVA
ARISKLYLESKNWADRIGMPTDFSVSMAPR

Transcript Sequence

Transcript ID

VIT_13s0019g04550.t01
Transcript Infomation

cdna chromosome:12X:13:5986256:5987899:1 gene:VIT_13s0019g04550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAACGCCTCCTCCTCCGGCGCGATTCGATATCACCCCGGCAACATCTCCAGGTTGAA
TCCTCGGAGTTTGAGGGGGTTGTAGTGCCTCCCAATCCCATGTGCAAATCCAAAAGCAGC
ATCAGTGCAGTGGAGCCCAGTGTCAACCACGGCCGATCAGACACACCCAGAAGCTCCCGA
GTCACCAGGACGTCCAGGTCGTCTTCTTCTGCGACGGATCGCAGCAATTTTAATCTTCCC
ACCAATTACAACACCAGTGGGACTTCCAGGTCATCTGAGTCGACTCCCGCTTCGCTTTCT
TGCATCAGAGAGTCCTTGCCGGAGAATCCCCACGTCTACGACATCTCCGAAATCTGCTCC
GCCACCGGCAATTTTCTTGCCAAGAAGTTCTCCTCCTCCTCTTCCGCTTGGCGCTGCTCT
GTCCGCGGCAAAGACGTGGTCATCTTCCAACGAAAGCTCCGCCGCCCCATCGAGACTGCG
GAGATTCGCAAACTGCTGTCGGTGATTTGCAAAAGCCACCATGGGAGCTTGATCAAGCTC
CTCGGGGCTTCGATTTCTGGAAACCACATTTACCTCGTTTACGATTACGTTGATGGCGCT
AGCCTCGCAGATTGTCTCAGAAACCCTAGAAACCCTAATTTCACAGTTCTGTCGAATTGG
GTCTCGAGAATGCAGATCGCGGCGGACTTGGCTCACGGGCTTGACTACGTCCACCATTGC
ACTGGATTGGATGCGAGTTTTGTGCACAATCGTATCAGGAGTTCCAGCATTCTCGTGATT
AACGACTCGTTGAATGCCAAGATATGCCATTTCGGCACCGCACAACTCTGCGGCGAAATC
GCGGAAGGTACCGGAAAAAATTCAGGGTCCTCCCAATTGAAAAGATCGGGCAGTGCGGTG
ATGAAGATCGAGGGGACGAGAGGGTACATGGCACCGGAATTTCAGTTGACAGGATTGGCG
ACGCGGAAATCGGATGTGTATGCGTTTGGGGTGGTGATTTTGGAGATCTTATCTGGAGCA
GAGGCGTTGAAGTACATTGCGGACGATGAGAGTGGTACATATAAGAGAGTGAGCGTGATT
GAAACAGCTAGAGAGGCCATTGAAGCTGAAGGTGGCGGCGGCGGTGGTGGGGTGAGGAGG
TGGGTGGACAGCAGGCTCAAGGACTCGTATCCGGTGGAGGTGGCGGAGAAGATGGTGCGT
TTGGGTCTGGAGTGCGTGGAGGGGGATCCGGGTAAGAGGCCCAATATGAGTGAAGTAGCG
GCTCGAATTTCTAAGCTGTACTTAGAGTCCAAGAATTGGGCCGATCGAATAGGGATGCCT
ACCGATTTCTCTGTCTCAATGGCACCTCGATGAATCCCTCCATAGAGTTATGATTTATAG
TAAAATTAGAGGAAGAGCCAGTTGATTTACAGACACAAACACGCAGCATTCTTACAGATG
ACATCTAACATCAAGGTAGCAATTGATTACAGTTCAACTTAGGTTTTGTTTTCAGTTAAA
TTTCGAACTACTCATTCGATCAATTCATCATCATGATTGAGAATGAAGAGTTCACAGAAG
TGGAGATGACACCCTTGTACAGCACTACGCCATCTCTACCGGGAATCTAATCATTCAGGT
TTTCTTTTCTACTGTTTTGAGTCG