Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g04440.t01
CDS Infomation

cds chromosome:12X:13:5829781:5834326:-1 gene:VIT_13s0019g04440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAGTGCGTGGAGGAGGGCGAAGCTGGCACTTGGGTTCAATATGTGCGTCTATGTT
CCCGCGACTGCGGAGGAAGAAGACTCCGCTGATAGGTTGTCCGATGCGGCTTTGCTCTCG
CCGGCGATGCCCATGACGCCTACGCCATCGTCGGGCGGTTTGAGGCTATCCAAGAGCGCG
AGCAGATCTTCCAAGAAAACCTGTGCGATATGTTTAACCTCAATGAAACGAGGGCATGGG
CAAGCTATCTTCACTGCAGAATGCTCACATTCTTTCCATTTCCACTGCATTACTTCAAAT
GTGAAGCATGGCAGCCAAATTTGCCCAGTTTGCAGAGCAAAATGGAAAGAAATCCCCTTT
GAGGGTCCCAATTTGGATCCTCCCCCTAGAAGGGCAAGAATAAACCCTGTGGATTGGCAC
CAAAATAATGATTTGATGACCATAATTCGCCGTCTACCTCCCCCTCGTCTAGATTCTAAT
CGAAATATCATGGCACTGCATCAGGCCTCTGAGCCTGGTGTTTTCAATGATGATGAATCC
TTAGATCACCAACCTGTGCCTGCAGAAAGAAACTCTTCAAATGGCAATGCGGCAGAAAAC
AACCCTGTTAGGACAGTCGAAATCAAAACATACCCAGAAGTTTCAGCTGCTCCACGGTCC
AAATCTTATGATAACTTCACTGTTCTGGTTCATCTTAAAGCTGCTGTTGCAAATACAGGA
CAAAATATCCAGAGAAACATGTCTAACTCGCCATTAAACTCTCATAATCCTCGAGCTCCA
GTTGACCTAGTTACAGTGCTTGACATCAGTGGCAGCATGGCAGGTACAAAGCTCGCATTG
CTAAAGCGAGCCATGGGCTTTGTGATACAGAACCTTGGCTCCAGTGACAGGCTGTCAGTT
ATTGCCTTCTCTTCCACTGCCCGCCGCCTCTTTCCTCTTCGCCGGATGACTGATGCAGGG
CGTCAGCAGGCATTGCAAGCTGTTAACTCTTTGGTGGCAAATGGTGGAACCAACATAGCT
GAAGGCCTGAGGAAGGGTGCCAAGGTAATGGAAGACAGAAAGGAAAGAAATCCAGTCTCA
AGTATTATACTGTTGTCTGATGGGCAGGACACTTACACTGTCAATGGCTCTAGTGGCAAC
CAACCCCAACCAAATTATCAGTTGCTACTTCCTCTGTCTATGCATGGCAGTCAGAACACA
GGGTTTCAAATTCCAGTGCATTCTTTTGGATTTGGGACAGATCATGATGCCTCATCAATG
CACACGATTTCAGAAATTTCTGGTGGAACCTTTTCTTTCATTGAGACTGAATCTGTGATC
CAGGATGCATTTGCCCAATGCATTGGGGGCCTTCTGAGTGTTGTGGTTCAGGAGCTGCAA
GTGGGAGTTGAGTGTGTGGACCCAAGTCTCCGCCTTGGCTCTTTAAAAGCAGGAAGTTAC
CCAAGCCACGTGATGGGCGATGCACGCACAGGGTCTATTGATGTTGGAGATTTGTATGCT
GATGAAGAGAGGGATTTTCTGGTTTCAGTTAAAGTTCCAGCTGAGTTGTCCGGTGCCAAG
ACCTCATTGATAAAGGTGAGGTGTGTCTACAAAGATCCCCTAACGAAGGAAATGGCTACT
TTGGAGAGTGAAGAAGTTAGGATTGAAAGACCTGAAACAGCTGGTCAGGAGGTGGTCTCA
ATAGAAGTGGACAGGCAACGCAACAGGCTCCAAGCAGCTGAGGCAATGGTACAGGCACGA
GCTGCAGCTGAGCAGGGAGACCTAGCTGGTGCAGTTTCTATCCTTGAAAGCTGCCGTAAG
GCATTATCAGATACAGTGTCAGCTAAATCTCATGATCGGCTCTGTGTGGCATTGGATGCT
GAGCTCAAGGAGATGCAAGAGCGGATGGCAAGCAGGCATGTATATGAGGCATCAGGGAGG
GCCTATATTCTGTCAGGATTGAGCTCACACTCATGGCAAAGAGCAACAGCAAGAGGTGAC
TCCACTGATGGTTCAAGTCTGGTTCAAGCTTACCAAACCCCATCAATGGCCGAGATGCTT
ACACGTTCTCAGGCTACCTTACTGGGCAGTCCATCAGCCCAGAGGCTTATTCGACCAGTA
TGGTCATGCACCTCACAGCCCAAGCCAAGGTAA

Peptide Sequence

PEP ID

VIT_13s0019g04440.t01
PEP Infomation

pep chromosome:12X:13:5829781:5834326:-1 gene:VIT_13s0019g04440 transcript:VIT_13s0019g04440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSAWRRAKLALGFNMCVYVPATAEEEDSADRLSDAALLSPAMPMTPTPSSGGLRLSKSA
SRSSKKTCAICLTSMKRGHGQAIFTAECSHSFHFHCITSNVKHGSQICPVCRAKWKEIPF
EGPNLDPPPRRARINPVDWHQNNDLMTIIRRLPPPRLDSNRNIMALHQASEPGVFNDDES
LDHQPVPAERNSSNGNAAENNPVRTVEIKTYPEVSAAPRSKSYDNFTVLVHLKAAVANTG
QNIQRNMSNSPLNSHNPRAPVDLVTVLDISGSMAGTKLALLKRAMGFVIQNLGSSDRLSV
IAFSSTARRLFPLRRMTDAGRQQALQAVNSLVANGGTNIAEGLRKGAKVMEDRKERNPVS
SIILLSDGQDTYTVNGSSGNQPQPNYQLLLPLSMHGSQNTGFQIPVHSFGFGTDHDASSM
HTISEISGGTFSFIETESVIQDAFAQCIGGLLSVVVQELQVGVECVDPSLRLGSLKAGSY
PSHVMGDARTGSIDVGDLYADEERDFLVSVKVPAELSGAKTSLIKVRCVYKDPLTKEMAT
LESEEVRIERPETAGQEVVSIEVDRQRNRLQAAEAMVQARAAAEQGDLAGAVSILESCRK
ALSDTVSAKSHDRLCVALDAELKEMQERMASRHVYEASGRAYILSGLSSHSWQRATARGD
STDGSSLVQAYQTPSMAEMLTRSQATLLGSPSAQRLIRPVWSCTSQPKPR

Transcript Sequence

Transcript ID

VIT_13s0019g04440.t01
Transcript Infomation

cdna chromosome:12X:13:5829781:5834326:-1 gene:VIT_13s0019g04440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTATTCATTCATTCATGGCGTTCGCCGCTAAAAACAAGGAAATTTGTATGTGTACTGG
TACAAGGAGCCTATTCAATCTGGTTTCTCCGCCACGACCCATTCTCAGTCTTAGCTTTGA
CACTGCCTTCTCATAGTTCCCCATGCAAACCGCCATTCTAAGCCTCCTGCTTTTCTGCTT
TTTTTAAAGCTCTTTAAGAGAAAGCAGTTCAACCCCAAGCATTTTTCGAGGTCTGTTTTC
TTTGGGCTTGGGTTTTTTGTTTTTGGGTTTTTCAAAAGCGTTTTTTTAGTTTTCTTTGGG
TGTGAGGAGGAGTTTTTGGATCTGCACTGAGATGGGGAGTGCGTGGAGGAGGGCGAAGCT
GGCACTTGGGTTCAATATGTGCGTCTATGTTCCCGCGACTGCGGAGGAAGAAGACTCCGC
TGATAGGTTGTCCGATGCGGCTTTGCTCTCGCCGGCGATGCCCATGACGCCTACGCCATC
GTCGGGCGGTTTGAGGCTATCCAAGAGCGCGAGCAGATCTTCCAAGAAAACCTGTGCGAT
ATGTTTAACCTCAATGAAACGAGGGCATGGGCAAGCTATCTTCACTGCAGAATGCTCACA
TTCTTTCCATTTCCACTGCATTACTTCAAATGTGAAGCATGGCAGCCAAATTTGCCCAGT
TTGCAGAGCAAAATGGAAAGAAATCCCCTTTGAGGGTCCCAATTTGGATCCTCCCCCTAG
AAGGGCAAGAATAAACCCTGTGGATTGGCACCAAAATAATGATTTGATGACCATAATTCG
CCGTCTACCTCCCCCTCGTCTAGATTCTAATCGAAATATCATGGCACTGCATCAGGCCTC
TGAGCCTGGTGTTTTCAATGATGATGAATCCTTAGATCACCAACCTGTGCCTGCAGAAAG
AAACTCTTCAAATGGCAATGCGGCAGAAAACAACCCTGTTAGGACAGTCGAAATCAAAAC
ATACCCAGAAGTTTCAGCTGCTCCACGGTCCAAATCTTATGATAACTTCACTGTTCTGGT
TCATCTTAAAGCTGCTGTTGCAAATACAGGACAAAATATCCAGAGAAACATGTCTAACTC
GCCATTAAACTCTCATAATCCTCGAGCTCCAGTTGACCTAGTTACAGTGCTTGACATCAG
TGGCAGCATGGCAGGTACAAAGCTCGCATTGCTAAAGCGAGCCATGGGCTTTGTGATACA
GAACCTTGGCTCCAGTGACAGGCTGTCAGTTATTGCCTTCTCTTCCACTGCCCGCCGCCT
CTTTCCTCTTCGCCGGATGACTGATGCAGGGCGTCAGCAGGCATTGCAAGCTGTTAACTC
TTTGGTGGCAAATGGTGGAACCAACATAGCTGAAGGCCTGAGGAAGGGTGCCAAGGTAAT
GGAAGACAGAAAGGAAAGAAATCCAGTCTCAAGTATTATACTGTTGTCTGATGGGCAGGA
CACTTACACTGTCAATGGCTCTAGTGGCAACCAACCCCAACCAAATTATCAGTTGCTACT
TCCTCTGTCTATGCATGGCAGTCAGAACACAGGGTTTCAAATTCCAGTGCATTCTTTTGG
ATTTGGGACAGATCATGATGCCTCATCAATGCACACGATTTCAGAAATTTCTGGTGGAAC
CTTTTCTTTCATTGAGACTGAATCTGTGATCCAGGATGCATTTGCCCAATGCATTGGGGG
CCTTCTGAGTGTTGTGGTTCAGGAGCTGCAAGTGGGAGTTGAGTGTGTGGACCCAAGTCT
CCGCCTTGGCTCTTTAAAAGCAGGAAGTTACCCAAGCCACGTGATGGGCGATGCACGCAC
AGGGTCTATTGATGTTGGAGATTTGTATGCTGATGAAGAGAGGGATTTTCTGGTTTCAGT
TAAAGTTCCAGCTGAGTTGTCCGGTGCCAAGACCTCATTGATAAAGGTGAGGTGTGTCTA
CAAAGATCCCCTAACGAAGGAAATGGCTACTTTGGAGAGTGAAGAAGTTAGGATTGAAAG
ACCTGAAACAGCTGGTCAGGAGGTGGTCTCAATAGAAGTGGACAGGCAACGCAACAGGCT
CCAAGCAGCTGAGGCAATGGTACAGGCACGAGCTGCAGCTGAGCAGGGAGACCTAGCTGG
TGCAGTTTCTATCCTTGAAAGCTGCCGTAAGGCATTATCAGATACAGTGTCAGCTAAATC
TCATGATCGGCTCTGTGTGGCATTGGATGCTGAGCTCAAGGAGATGCAAGAGCGGATGGC
AAGCAGGCATGTATATGAGGCATCAGGGAGGGCCTATATTCTGTCAGGATTGAGCTCACA
CTCATGGCAAAGAGCAACAGCAAGAGGTGACTCCACTGATGGTTCAAGTCTGGTTCAAGC
TTACCAAACCCCATCAATGGCCGAGATGCTTACACGTTCTCAGGCTACCTTACTGGGCAG
TCCATCAGCCCAGAGGCTTATTCGACCAGTATGGTCATGCACCTCACAGCCCAAGCCAAG
GTAAATT