Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g04420.t01
CDS Infomation

cds chromosome:12X:13:5813987:5818846:1 gene:VIT_13s0019g04420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTGCATGAAGCTTGGATCCAAACCTGAAGCCTTTCACCTCGATGGCCAAACCTTG
CTCTGCTCAACTGGTCTTCCAAGCGATGTTATCATTGAAGTTGGAGAAATGTCTTTTCAT
CTGCACAAGTTTCCTCTGCTGTCCAGAAGTGGGGTAATAGAAAATCTTATTGGAGAATCT
TCTGGTGAGGATGAAAGAAATTGTATCTTGCAACTGCATGACATACCAGGAGGAGCCAAA
ACCTTTTTGCTTGTGGCCAAGTTCTGTTATGGTGTTAAAATAGAACTCACTGCGTTGAAT
GTAGTCAGTCTCAGGTGTGCAGCCGAGCATCTTCAAATGAAAGAAAACTTTGGAGAGGGG
AATCTGGTTAGTCAAACAGAAAATTTCTTAAATGAAGTCTTTGGAGACTGGACAGACTCA
CTTAAAGCTCTTGAAGCATGTGAAGAGGTTCTACCACATGCCGAAGAGCTTCATATTGTT
TCAAGATGCATTAATTCTTTAGCAGTGAAAGCTAGTGCAGATCCGAGCCTAGTCGGTTGG
CCTGAGTCGGGAGGTGAAGCAGCACAGAGCCCAGTGGGCACTGTTTTATGGAATGGAATT
CTCACGTCGTCCAATCCCCATCCTGTAAGTGATGATTGGTGGTATGAGGATGTGTCCTGC
CTTAAACTACCAATGTATAAGAGGCTGATCCTGGCTGTTGAATCAAGAGCCATGAGGCCG
GAGAGGATTTCTGGGTCCCTCATGTACTATACAAAAAAGTATCTCCCACTGATGGGTAGA
CAATCGAGCTTTCAGAATGGAAACCGTGCTGCCCTTGGATCAACTGTTTCTGCTCTGTCT
GATGCAGATCAAAGGAACCTCCTTGAAGAGATAGTAGAGTTACTACCTGATCAAAAGGGA
GTCACATCAACCAAGTTCCTGCTTAGGCTTCTCCGGACATCCATGCTCTTACATGCAAGC
CCATCATGTCGAGAGAATTTGGAGAAACGGATTGGGGCCCAGTTGGATCAAGCAGTCCTT
GAAGATCTCATTATACCAAATTTGGGATATTCAGTGGAGACCCTTTATGACATTGACTGT
GTTCAGCGAATCCTCGACCACTTCATGTTGGTTGACCGTGATGTAACTGATTCTACAAAT
TGTATAGTAGATGAAGCGCAGTTGATGGTAGGGTCCCATTCACTGACTCGAATGACAATG
GTGGCAAATCTGGTGGATGGGTATCTTGCCGAGGTGGCACCTGATGTCAATTTGAAATTG
CAAAAATTTCAGTCACTTGCTGCTGTTATCCCTGATTATGCCAGGCCATTAGATGATGGA
ATTTACCGGGCTATTGATATATACCTCAAGGCACATCCATGGCTAACAGATTCAGAGAGA
GAACTAATCTGCAGACTTGTGAACTGCCAGAAGCTCTCATTAGAAGCGAGCACCCATGCA
GCCCAGAATGAGAGGCTGCCACTTCGACTCATCGTCCAAGTTCTATTCTTTGAACAGCTT
CGTCTGCGCACATCCATTGCTGGATGGTTCTTCGTCTCGGACAACTTGGAGACCTCTCAG
GACCCTAGTGGGAATCTTGCCCTCCCCAGGAGAAGCACAACACAGGATGAAATTGTTGCG
GTTGACGATATGAGGGAGCGGGTTTCCGAGCTCGAGAAAGAGTGTCTGAGCATGAAAAAA
GAGATTGAAAAGCTGGTGACGACGAAAAGGAGCTGGAACATCTTCTGCAGAAGGCTTGGG
TTTAGACTAAAGCCAAATTCCTCCGGTCCAAAGGCCTCCAATAATGCCAAAGCTTCACCA
TCATCAACTACACCTCTCCTTAATACTAGTCAAAATCAACACAGTGGTAAGCTAGTGTGA

Peptide Sequence

PEP ID

VIT_13s0019g04420.t01
PEP Infomation

pep chromosome:12X:13:5813987:5818846:1 gene:VIT_13s0019g04420 transcript:VIT_13s0019g04420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MACMKLGSKPEAFHLDGQTLLCSTGLPSDVIIEVGEMSFHLHKFPLLSRSGVIENLIGES
SGEDERNCILQLHDIPGGAKTFLLVAKFCYGVKIELTALNVVSLRCAAEHLQMKENFGEG
NLVSQTENFLNEVFGDWTDSLKALEACEEVLPHAEELHIVSRCINSLAVKASADPSLVGW
PESGGEAAQSPVGTVLWNGILTSSNPHPVSDDWWYEDVSCLKLPMYKRLILAVESRAMRP
ERISGSLMYYTKKYLPLMGRQSSFQNGNRAALGSTVSALSDADQRNLLEEIVELLPDQKG
VTSTKFLLRLLRTSMLLHASPSCRENLEKRIGAQLDQAVLEDLIIPNLGYSVETLYDIDC
VQRILDHFMLVDRDVTDSTNCIVDEAQLMVGSHSLTRMTMVANLVDGYLAEVAPDVNLKL
QKFQSLAAVIPDYARPLDDGIYRAIDIYLKAHPWLTDSERELICRLVNCQKLSLEASTHA
AQNERLPLRLIVQVLFFEQLRLRTSIAGWFFVSDNLETSQDPSGNLALPRRSTTQDEIVA
VDDMRERVSELEKECLSMKKEIEKLVTTKRSWNIFCRRLGFRLKPNSSGPKASNNAKASP
SSTTPLLNTSQNQHSGKLV

Transcript Sequence

Transcript ID

VIT_13s0019g04420.t01
Transcript Infomation

cdna chromosome:12X:13:5813987:5818846:1 gene:VIT_13s0019g04420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTGCATGAAGCTTGGATCCAAACCTGAAGCCTTTCACCTCGATGGCCAAACCTTG
CTCTGCTCAACTGGTCTTCCAAGCGATGTTATCATTGAAGTTGGAGAAATGTCTTTTCAT
CTGCACAAGTTTCCTCTGCTGTCCAGAAGTGGGGTAATAGAAAATCTTATTGGAGAATCT
TCTGGTGAGGATGAAAGAAATTGTATCTTGCAACTGCATGACATACCAGGAGGAGCCAAA
ACCTTTTTGCTTGTGGCCAAGTTCTGTTATGGTGTTAAAATAGAACTCACTGCGTTGAAT
GTAGTCAGTCTCAGGTGTGCAGCCGAGCATCTTCAAATGAAAGAAAACTTTGGAGAGGGG
AATCTGGTTAGTCAAACAGAAAATTTCTTAAATGAAGTCTTTGGAGACTGGACAGACTCA
CTTAAAGCTCTTGAAGCATGTGAAGAGGTTCTACCACATGCCGAAGAGCTTCATATTGTT
TCAAGATGCATTAATTCTTTAGCAGTGAAAGCTAGTGCAGATCCGAGCCTAGTCGGTTGG
CCTGAGTCGGGAGGTGAAGCAGCACAGAGCCCAGTGGGCACTGTTTTATGGAATGGAATT
CTCACGTCGTCCAATCCCCATCCTGTAAGTGATGATTGGTGGTATGAGGATGTGTCCTGC
CTTAAACTACCAATGTATAAGAGGCTGATCCTGGCTGTTGAATCAAGAGCCATGAGGCCG
GAGAGGATTTCTGGGTCCCTCATGTACTATACAAAAAAGTATCTCCCACTGATGGGTAGA
CAATCGAGCTTTCAGAATGGAAACCGTGCTGCCCTTGGATCAACTGTTTCTGCTCTGTCT
GATGCAGATCAAAGGAACCTCCTTGAAGAGATAGTAGAGTTACTACCTGATCAAAAGGGA
GTCACATCAACCAAGTTCCTGCTTAGGCTTCTCCGGACATCCATGCTCTTACATGCAAGC
CCATCATGTCGAGAGAATTTGGAGAAACGGATTGGGGCCCAGTTGGATCAAGCAGTCCTT
GAAGATCTCATTATACCAAATTTGGGATATTCAGTGGAGACCCTTTATGACATTGACTGT
GTTCAGCGAATCCTCGACCACTTCATGTTGGTTGACCGTGATGTAACTGATTCTACAAAT
TGTATAGTAGATGAAGCGCAGTTGATGGTAGGGTCCCATTCACTGACTCGAATGACAATG
GTGGCAAATCTGGTGGATGGGTATCTTGCCGAGGTGGCACCTGATGTCAATTTGAAATTG
CAAAAATTTCAGTCACTTGCTGCTGTTATCCCTGATTATGCCAGGCCATTAGATGATGGA
ATTTACCGGGCTATTGATATATACCTCAAGGCACATCCATGGCTAACAGATTCAGAGAGA
GAACTAATCTGCAGACTTGTGAACTGCCAGAAGCTCTCATTAGAAGCGAGCACCCATGCA
GCCCAGAATGAGAGGCTGCCACTTCGACTCATCGTCCAAGTTCTATTCTTTGAACAGCTT
CGTCTGCGCACATCCATTGCTGGATGGTTCTTCGTCTCGGACAACTTGGAGACCTCTCAG
GACCCTAGTGGGAATCTTGCCCTCCCCAGGAGAAGCACAACACAGGATGAAATTGTTGCG
GTTGACGATATGAGGGAGCGGGTTTCCGAGCTCGAGAAAGAGTGTCTGAGCATGAAAAAA
GAGATTGAAAAGCTGGTGACGACGAAAAGGAGCTGGAACATCTTCTGCAGAAGGCTTGGG
TTTAGACTAAAGCCAAATTCCTCCGGTCCAAAGGCCTCCAATAATGCCAAAGCTTCACCA
TCATCAACTACACCTCTCCTTAATACTAGTCAAAATCAACACAGTGGTAAGCTAGTGTGA