Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g04330.t01
CDS Infomation

cds chromosome:12X:13:5655667:5663090:-1 gene:VIT_13s0019g04330 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:F6HNG2]
Sequence

ATGAATGTAAGCCACCCTGCGGTGCACCCAATTGAGGCACCTCCGCTCACCGATGCCGCC
AACGGTGCGCCGAGGGCGCGGATGAAGGACATCCAAGGCATGCCGGGCACTCTTGGAGGC
CTGGTGTTGCGATTCTTCCAGTTCGCGTTTGCGGCAGTGTCGCTGTGTGTCATGGCCACC
ACCAGCGATTTCCCCTCTGTCACCGCCTTCTGCTACCTTGTTGCTGCTGTCAGCTTGCAA
AGCTTGTGGAGCCTTTCTCTTGCCATTGTTGATATATATGCACTTTTAGTGAGGCGCTGC
TTGCGAAATTCCAGAATTGTCAGCTTATTTACAGTGGGTGATGGGATTACTTCGACACTT
ACATTTGCTGCAGCCTGTGCATCTGCTGGTATAACAGTCCTTATTGGCAATGATCTTGAT
AACTGTGCTGTGAACCACTGCACCAGATTTGAAACAGCTACAGCAATGGCCTTCCTCAGT
TGGTTTGCGGTCTCACCATCATTTCTCTTGAATTTCTGGTCACTGGCATCCAAGTGA

Peptide Sequence

PEP ID

VIT_13s0019g04330.t01
PEP Infomation

pep chromosome:12X:13:5655667:5663090:-1 gene:VIT_13s0019g04330 transcript:VIT_13s0019g04330.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:F6HNG2]
Sequence

MNVSHPAVHPIEAPPLTDAANGAPRARMKDIQGMPGTLGGLVLRFFQFAFAAVSLCVMAT
TSDFPSVTAFCYLVAAVSLQSLWSLSLAIVDIYALLVRRCLRNSRIVSLFTVGDGITSTL
TFAAACASAGITVLIGNDLDNCAVNHCTRFETATAMAFLSWFAVSPSFLLNFWSLASK

Transcript Sequence

Transcript ID

VIT_13s0019g04330.t01
Transcript Infomation

cdna chromosome:12X:13:5655667:5663090:-1 gene:VIT_13s0019g04330 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:F6HNG2]
Sequence

CTGTTAGGGTTATCCGAGTTGCAGAGCGGAGCCGGGAATTCTTCGGCGCGCCCGATCACT
GATTCAATACGGTTTCGAATTATAGAAATCGATACAATCACCGATCTTTATCGTAAGAAA
TTGACTCAGTTGAGCGGATCGCAAGAATCCATGGGCACAGTGGCGGTATAGCATTTTTTT
TTTCTCTGAAACGATGAATGTAAGCCACCCTGCGGTGCACCCAATTGAGGCACCTCCGCT
CACCGATGCCGCCAACGGTGCGCCGAGGGCGCGGATGAAGGACATCCAAGGCATGCCGGG
CACTCTTGGAGGCCTGGTGTTGCGATTCTTCCAGTTCGCGTTTGCGGCAGTGTCGCTGTG
TGTCATGGCCACCACCAGCGATTTCCCCTCTGTCACCGCCTTCTGCTACCTTGTTGCTGC
TGTCAGCTTGCAAAGCTTGTGGAGCCTTTCTCTTGCCATTGTTGATATATATGCACTTTT
AGTGAGGCGCTGCTTGCGAAATTCCAGAATTGTCAGCTTATTTACAGTGGGTGATGGGAT
TACTTCGACACTTACATTTGCTGCAGCCTGTGCATCTGCTGGTATAACAGTCCTTATTGG
CAATGATCTTGATAACTGTGCTGTGAACCACTGCACCAGATTTGAAACAGCTACAGCAAT
GGCCTTCCTCAGTTGGTTTGCGGTCTCACCATCATTTCTCTTGAATTTCTGGTCACTGGC
ATCCAAGTGAAAGGAACCAAGATGGGATTCAACTCAATTCAACAAAGTCCAAAATCCCCA
TTACTTGGGGTAGCTTACTAAAGTATTATTCAAACTGTGTTCTTGGCATGATTTCCCTGT
TGGTTTTCTCCCATTTACCTGAGATACTATGACCCTTCCTGTGTAAAATCAAGTCTGGTT
TGGCATATAAATGCAGTTGTGTAACATGATGTTATAACTGCAAAAAAGGAAGCAAAGAAG
AGAAAGAGTCCATAGTTTTGAGTGTTTGGATGGCTTAACTATTATTATGAAGAAATCTTA
GGATCACAAGTTATATTGTTGTATAAACGCGACAGGCACATGGTTGGGGTGGCCCTGTTC
AAATACTTAGTTGAGTACTAGTTCAGTAGAACTGTTATTTGTAGGAAAA