Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g04240.t01
CDS Infomation

cds chromosome:12X:13:5559175:5571381:-1 gene:VIT_13s0019g04240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGGAAGAGTGGTTATGATTTTATCAATCTTAATTCTTCTTCCCTTCGTTGCCTTT
TCCCTCTCCAAAGCCGACGAACCAGAAGATCTCACTCTGCTCCAATCCCAAGACCAAAAC
GACGTCGTATCGCCTCCTCCAGATCCAAACCGCTTCAACGGCGGCGGCGGCGGCGATGAC
GATGACCTATCCGATTCAGACGGTGCCGGCGGCGACGACGACTCGGATCGCGAGGTGGTG
GACGAGAAGGATGTCGTGGTGTTGAAGGAGGCGAATTTCAGCGAGTTCCTGGAGAGGAAT
CCCTACGTGATGGTTGAATTCTATGCGCCGTGGTGCGGCCATTGCAAGGCTCTGGCGCCG
GAGTATGCGGAGGCGGCGACTGAGTTGAAGGGAGAGGCGGTGCTCGCCAAGGTTGATGGT
ACGGAGGAGAGTGGGCTCATGGACAAGTATGAGGTGCAGGGGTTTCCGACTTTGTATTTC
TATGCTGATGGAGTTCATAAGGCCTATTCTGGACTGAGGACTAAAGATGCTATTGTGGCT
TGGGTTAAGAAGAAGATGGAGTCTGGCATCCACAACATAACAACAACAGTGGAGGCAGAA
AGCATATTGACTACAGAATCAAAAATTGTTTTGGGGTTCCTGGACAGTTTAGAGGGTCCA
GAGAGTCAGGAGTTGGCTGCTGCTTCAAGATTGGAAGATGATGTCAACTTCTATCAAACT
GCTAGTCCAGAGGTGGCAAAGCTTTTCCACATTGATCAACAAGTCAAACGTCCTGCACTG
GTATTGCTAAAGAAGGAGGCTGAAAAATTGAGCCACTTTGATGGTCAGTTTATCAAATCG
GCTATAGCTGAGTTTGTATTTGCAAACAAGCATCCTTTGGTAATCATTTTTACTAAGGAA
AGTTCTCGGCAGATTTTCGAAAATCCAATTAAAAAACAGTTGTTGCTTTTTGCCACTTCA
AAGGATTCAGAGAATGTTCTACCTCAATTTCAAGAAGCAGCAAAAGCTTTCAAGGGAAAG
CTTATTTTTGTGTATGTGGAAATGGACAACAAGGATGGTAAATCAGTTGCAGATTACTTT
GGTGTAACTGGAGATGCTCCAAGAGTTCTTGCATACACAGGAAATGATGATGCCAAGAAG
TATGTATTGGATGGTGAATTAACCTTGACCAGTATTAAGTCATTTGGCGAAGATTTCTTG
GAAGACAAGCTTAAGCGTTTTTACAAGTCAGACCCAATCCCAGAGACAAATGACGGGGAT
GTAAAAATTGTTGTCGGTGATAATTTCGATGAACTTGTTTTGGATGAATCAAAGGATGTT
CTTCTTGAGATATATGATCCCTCGTGTGGGTATTGCCAAGCATTGGAACCAACATACAAC
AAGCTTGCCAAGTATTTGAGAGGCATTGATTCACTTGTTATAGCTAAGATGGATGGGACA
AAAAATGAGCACCCAAGAGCAAAGACTGATGGGTTCCCTACAATTCTTTTCTTCCCGGCT
GGGAATAAGAGCTTTGATCCGATCACTTTTGATGGTGACCGTACTTTGGTGGCATTCTAT
AAGTTCCTTAAGAAGTATGCATCCATCCCTTTCAAGCTCAAAAAACCAGCTTCATACCAG
AGCTCCAAGGGTGCTGAGGCCAAGGATGGCAATGAGAGCAATAACAGTGTCAAGGATGAA
TTGTGA

Peptide Sequence

PEP ID

VIT_13s0019g04240.t01
PEP Infomation

pep chromosome:12X:13:5559175:5571381:-1 gene:VIT_13s0019g04240 transcript:VIT_13s0019g04240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGRVVMILSILILLPFVAFSLSKADEPEDLTLLQSQDQNDVVSPPPDPNRFNGGGGGDD
DDLSDSDGAGGDDDSDREVVDEKDVVVLKEANFSEFLERNPYVMVEFYAPWCGHCKALAP
EYAEAATELKGEAVLAKVDGTEESGLMDKYEVQGFPTLYFYADGVHKAYSGLRTKDAIVA
WVKKKMESGIHNITTTVEAESILTTESKIVLGFLDSLEGPESQELAAASRLEDDVNFYQT
ASPEVAKLFHIDQQVKRPALVLLKKEAEKLSHFDGQFIKSAIAEFVFANKHPLVIIFTKE
SSRQIFENPIKKQLLLFATSKDSENVLPQFQEAAKAFKGKLIFVYVEMDNKDGKSVADYF
GVTGDAPRVLAYTGNDDAKKYVLDGELTLTSIKSFGEDFLEDKLKRFYKSDPIPETNDGD
VKIVVGDNFDELVLDESKDVLLEIYDPSCGYCQALEPTYNKLAKYLRGIDSLVIAKMDGT
KNEHPRAKTDGFPTILFFPAGNKSFDPITFDGDRTLVAFYKFLKKYASIPFKLKKPASYQ
SSKGAEAKDGNESNNSVKDEL

Transcript Sequence

Transcript ID

VIT_13s0019g04240.t01
Transcript Infomation

cdna chromosome:12X:13:5559175:5571381:-1 gene:VIT_13s0019g04240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTCCACTGCTCTACGGAATGGCGGGAAGAGTGGTTATGATTTTATCAATCTTAATTCTT
CTTCCCTTCGTTGCCTTTTCCCTCTCCAAAGCCGACGAACCAGAAGATCTCACTCTGCTC
CAATCCCAAGACCAAAACGACGTCGTATCGCCTCCTCCAGATCCAAACCGCTTCAACGGC
GGCGGCGGCGGCGATGACGATGACCTATCCGATTCAGACGGTGCCGGCGGCGACGACGAC
TCGGATCGCGAGGTGGTGGACGAGAAGGATGTCGTGGTGTTGAAGGAGGCGAATTTCAGC
GAGTTCCTGGAGAGGAATCCCTACGTGATGGTTGAATTCTATGCGCCGTGGTGCGGCCAT
TGCAAGGCTCTGGCGCCGGAGTATGCGGAGGCGGCGACTGAGTTGAAGGGAGAGGCGGTG
CTCGCCAAGGTTGATGGTACGGAGGAGAGTGGGCTCATGGACAAGTATGAGGTGCAGGGG
TTTCCGACTTTGTATTTCTATGCTGATGGAGTTCATAAGGCCTATTCTGGACTGAGGACT
AAAGATGCTATTGTGGCTTGGGTTAAGAAGAAGATGGAGTCTGGCATCCACAACATAACA
ACAACAGTGGAGGCAGAAAGCATATTGACTACAGAATCAAAAATTGTTTTGGGGTTCCTG
GACAGTTTAGAGGGTCCAGAGAGTCAGGAGTTGGCTGCTGCTTCAAGATTGGAAGATGAT
GTCAACTTCTATCAAACTGCTAGTCCAGAGGTGGCAAAGCTTTTCCACATTGATCAACAA
GTCAAACGTCCTGCACTGGTATTGCTAAAGAAGGAGGCTGAAAAATTGAGCCACTTTGAT
GGTCAGTTTATCAAATCGGCTATAGCTGAGTTTGTATTTGCAAACAAGCATCCTTTGGTA
ATCATTTTTACTAAGGAAAGTTCTCGGCAGATTTTCGAAAATCCAATTAAAAAACAGTTG
TTGCTTTTTGCCACTTCAAAGGATTCAGAGAATGTTCTACCTCAATTTCAAGAAGCAGCA
AAAGCTTTCAAGGGAAAGCTTATTTTTGTGTATGTGGAAATGGACAACAAGGATGGTAAA
TCAGTTGCAGATTACTTTGGTGTAACTGGAGATGCTCCAAGAGTTCTTGCATACACAGGA
AATGATGATGCCAAGAAGTATGTATTGGATGGTGAATTAACCTTGACCAGTATTAAGTCA
TTTGGCGAAGATTTCTTGGAAGACAAGCTTAAGCGTTTTTACAAGTCAGACCCAATCCCA
GAGACAAATGACGGGGATGTAAAAATTGTTGTCGGTGATAATTTCGATGAACTTGTTTTG
GATGAATCAAAGGATGTTCTTCTTGAGATATATGATCCCTCGTGTGGGTATTGCCAAGCA
TTGGAACCAACATACAACAAGCTTGCCAAGTATTTGAGAGGCATTGATTCACTTGTTATA
GCTAAGATGGATGGGACAAAAAATGAGCACCCAAGAGCAAAGACTGATGGGTTCCCTACA
ATTCTTTTCTTCCCGGCTGGGAATAAGAGCTTTGATCCGATCACTTTTGATGGTGACCGT
ACTTTGGTGGCATTCTATAAGTTCCTTAAGAAGTATGCATCCATCCCTTTCAAGCTCAAA
AAACCAGCTTCATACCAGAGCTCCAAGGGTGCTGAGGCCAAGGATGGCAATGAGAGCAAT
AACAGTGTCAAGGATGAATTGTGAGATCTGACCAGCATTTTGTTGGATTTGGTTATTAGG
TTTTGGATACAGAAAACAACAGAGTATAAAAAAGGCTTAGGCAAGGCAGAGTTCAATTAT
ATTAATTGTATTTTGTAACTTAAATTCTCCTTCTTCCCCCCATTCAAGAATCCTGAGAAT
GCCATAAAAGTTTTTATTCATGTAAGATGTTTATAGAAGTGCGGTTAAGGGGTAATGAAG
ATAGGGGTGCAGTGGATAATACCCATTGTGGTCGAGTGTAATGAAGGCATCGGTGGCTCC
ATTTGTAAGTTCAAATGGGCTGATGGAGTTATAGAGGGATA