Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g03950.t01
CDS Infomation

cds chromosome:12X:13:5189336:5202862:1 gene:VIT_13s0019g03950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGCATCAATTTCAGATACTAGGAACATGGAAACGGGAAAGAACCAAGGTAATGCT
GCACAAGTGGAGAGTTTGAAGTCTCGCGTTGATGATATATTCACAAAGGTCGACAAGCTT
GAGCAAAGAGTGAATGAGGTTGAGCAATTCTACTTGACTGCAAGTAAGAAGCAATTGAAT
GTTTCTAAAGGTAGTTCAATTGTGAAGGATAAGGATAAGGATAAGGAGAGACATGTTGCT
AGTGTAAAAAAGCAGCAGCAAGATGCATCACGCAGGGAAGCAGCTGCTGCAAAGAGAATG
CAAGAGCTTATGCGTCAGTTTGGCACAATATTACGTCAGATCACGCAGCACAAGTGGGCC
TGGCCCTTTATGCAGCCTGTAGATGTTGAAGGCCTTGGTTTGCATGACTATTATGAGGTT
ATTGAGAAGCCCATGGACTTCAGTACAATAAAAAATAAAATGGAAGCAAAGGATGGTGCC
GGATATAAGAATGTCAGGGAGATATGTGCTGATGTGAGGTTGGTTTTCAAGAATGCAATG
AAGTATAATGATGAGAGAAGAGATGTTCACGTTATGGCCAAAACTTTGTTGGGGAAATTT
GAGGAGAAGTGGCTCCAGCTTCTGCCAAAAGTTGCAGAAGAGGACAAAAGACGAGAAGAG
GAAGAAGCAGAGGCACAATTAGATATGCATCTTGCCCAGGAGGCTGCTCATGCCAAAATG
GCTAGAGATATAAGTAATGAGCTTTTCGAGATTGATATGCATTTGGATGACATCAGAGAA
ATAATTGTTCAGAAGTGCAGAAAAACATCAACTGAAGAGAAAAGAAAACTTGGAGCTGCC
CTCTCTAGATTGTCCGCAGAAGATCTCAGTAAGGCTCTGGAGATTGTTGCTCAGAGCAAC
CCAAGCTTCCAAGCCACAGCTGAGGAGGTGCACCTTGACATTGATGCACAGAGGGAGTCC
ACCTTATGGAGGTTGAAGTTTTTTGTGAAGGATGCGTTGGAAATCCAGGGAAAGAGTTCA
GCAAGCATGGGGGGAAATAACACGGCCACCACCACCAATAACAACCACCCCACCACCAAC
AACAACAGCAAACGGAAAAAAGAGATATGTGATGCTATTGCCAAGACTGCAAAGAAGAAG
AATAAAAAGGCTCCCTCTTGA

Peptide Sequence

PEP ID

VIT_13s0019g03950.t01
PEP Infomation

pep chromosome:12X:13:5189336:5202862:1 gene:VIT_13s0019g03950 transcript:VIT_13s0019g03950.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDASISDTRNMETGKNQGNAAQVESLKSRVDDIFTKVDKLEQRVNEVEQFYLTASKKQLN
VSKGSSIVKDKDKDKERHVASVKKQQQDASRREAAAAKRMQELMRQFGTILRQITQHKWA
WPFMQPVDVEGLGLHDYYEVIEKPMDFSTIKNKMEAKDGAGYKNVREICADVRLVFKNAM
KYNDERRDVHVMAKTLLGKFEEKWLQLLPKVAEEDKRREEEEAEAQLDMHLAQEAAHAKM
ARDISNELFEIDMHLDDIREIIVQKCRKTSTEEKRKLGAALSRLSAEDLSKALEIVAQSN
PSFQATAEEVHLDIDAQRESTLWRLKFFVKDALEIQGKSSASMGGNNTATTTNNNHPTTN
NNSKRKKEICDAIAKTAKKKNKKAPS

Transcript Sequence

Transcript ID

VIT_13s0019g03950.t01
Transcript Infomation

cdna chromosome:12X:13:5189336:5202862:1 gene:VIT_13s0019g03950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGAGAGAGAACGTAGAGATAGGGTTTACATTTTGATTCGACGATTCCTCTCGAAATCCTG
TACTTGCGAACAAGAACGTTTGATTTCAGTTACAATGGTTAGATCTTTGACGATTCTCTG
AATTGTCTTGTATCAGATGGAACCAATGGATGCATCAATTTCAGATACTAGGAACATGGA
AACGGGAAAGAACCAAGGTAATGCTGCACAAGTGGAGAGTTTGAAGTCTCGCGTTGATGA
TATATTCACAAAGGTCGACAAGCTTGAGCAAAGAGTGAATGAGGTTGAGCAATTCTACTT
GACTGCAAGTAAGAAGCAATTGAATGTTTCTAAAGGTAGTTCAATTGTGAAGGATAAGGA
TAAGGATAAGGAGAGACATGTTGCTAGTGTAAAAAAGCAGCAGCAAGATGCATCACGCAG
GGAAGCAGCTGCTGCAAAGAGAATGCAAGAGCTTATGCGTCAGTTTGGCACAATATTACG
TCAGATCACGCAGCACAAGTGGGCCTGGCCCTTTATGCAGCCTGTAGATGTTGAAGGCCT
TGGTTTGCATGACTATTATGAGGTTATTGAGAAGCCCATGGACTTCAGTACAATAAAAAA
TAAAATGGAAGCAAAGGATGGTGCCGGATATAAGAATGTCAGGGAGATATGTGCTGATGT
GAGGTTGGTTTTCAAGAATGCAATGAAGTATAATGATGAGAGAAGAGATGTTCACGTTAT
GGCCAAAACTTTGTTGGGGAAATTTGAGGAGAAGTGGCTCCAGCTTCTGCCAAAAGTTGC
AGAAGAGGACAAAAGACGAGAAGAGGAAGAAGCAGAGGCACAATTAGATATGCATCTTGC
CCAGGAGGCTGCTCATGCCAAAATGGCTAGAGATATAAGTAATGAGCTTTTCGAGATTGA
TATGCATTTGGATGACATCAGAGAAATAATTGTTCAGAAGTGCAGAAAAACATCAACTGA
AGAGAAAAGAAAACTTGGAGCTGCCCTCTCTAGATTGTCCGCAGAAGATCTCAGTAAGGC
TCTGGAGATTGTTGCTCAGAGCAACCCAAGCTTCCAAGCCACAGCTGAGGAGGTGCACCT
TGACATTGATGCACAGAGGGAGTCCACCTTATGGAGGTTGAAGTTTTTTGTGAAGGATGC
GTTGGAAATCCAGGGAAAGAGTTCAGCAAGCATGGGGGGAAATAACACGGCCACCACCAC
CAATAACAACCACCCCACCACCAACAACAACAGCAAACGGAAAAAAGAGATATGTGATGC
TATTGCCAAGACTGCAAAGAAGAAGAATAAAAAGGCTCCCTCTTGATTAATCTGGCAAGC
CATGTGGGAAATGCCCAGAATGCCTACTGATTTTGTTATTGATTCGAGTATATTATTTGG
CCAATGCATGTAAACTAGGTTTGTTTTCAGGTGTCGTATGTTTTCCAAATTTGACCAAGA
CCAGGTTTTGAAATCATTTCTGTATAAATTTGACCATTCGTGGTGGTGCTCTTGACTCCA
TAATTGTAAAGATGGATTATCTTGATTAAC