Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g03390.t01
CDS Infomation

cds chromosome:12X:13:4426369:4433341:-1 gene:VIT_13s0019g03390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAAACCCTAACGAACAAGGATCTGTTGATGATCGCAAGATCTATGTGTCCGATGCA
GTGGAGGAATACGGCGGTGAGGATCTTGAGAATTCACCGTCCGTTGAATCCGCTGTTATT
GGATCTGGTGGGAGTTCTAGCGTTTCTCCGGCGAACGGTGGTTCTGATGGTGAGATTGGT
CTCACGGAGCGATTAACCGATATTCTGGTAGAAGACGGGGATGGAGATCTGTTGCTTCAG
CGTAGCAATCGAGAAACTAGGGTTTTGCAGTGGTTGCAGGCTCTGGATTTGCAAGTCATG
GGGGCGTGTCGTGCTGATGAGAGACTGAAGCCTTTGTTGAAACTGAATGTCTCTAATGGT
GTTGCTGAAGATCGCCTTTTAGATCATCTAATTCAGCACTTCGATGCGGCAGAAGTTGGT
AAACTAGCAAGGTGCTTGTGTATTCCTCTGGTTTCAATTCGCGTTGGAAAGATCATTAAG
CAAGGGACCCTCCTGTGCCCAACTGCTACAAGGGGAAACCTAAATCTCACACTTCTGCCG
ACATCTGAAATGCGCATTGCATTCATTGGGGATGATGGTTACACAGAGAGGCTGTCTACC
TTAAGTAGTATTTCCCAGTGCTCTGCTGTTGCAATTGAAGAAATACCTGCAGACAATTCT
GGAAGATCTTTCCTCATAAAGATCCCAGATTGTGAGGTTCTCTATTTTTGGTGCTCTGAA
AAGTCAAAGCTCCTGGGCATAGAATTGCTTGCAAAGATGAAGGATTTACTCAAGAGGAAG
CCATCTTTAGCTGAATTAACTGGAATCAGTGAGTCACGTCTTGACTGCTTTGCGACCCAC
CTCCGTGCCTACCTTGTTGGGTCATCCATGGGCAATGCTCGAGCAAGGCCATCCAATTCG
CCATCCTCTTCAATGGATACCATAGCTGATCCTTCTGAACTAGGTCAAAATGCTCAATTT
TTGCCCTCATTGTCAAAGCCTTCACGGTCTCGACACAACAGCAGTCAAGCAGTTAAACCA
AATTCACTCTATCAATGTAGCCTGAGTCCAAGGCCAAGTTCCTTTAAAGAGGGTCTGCCT
AGGAACTTATCATCCTTGAGAAATGCTGCCAGAGAGAAGTTTAAACGGCGTGGTGAAAGC
CATTTTTCAGCTGTTGACAATCTGCCTATTGCCTCATGTATCACTATGGATGCACCAAGT
TCAAATTCTACTGAAAAGGACAAGCTTCCGGAAGTTGTTGGAACATACCCATTCTCTGAG
TCAGATTTTCTGGAATCACTGGGTAAATCTGCTGCTGCACCCTTAATAAGCCCATCATCT
CAAATCCCTTCGATAGGTTCATCTCTCTTCGCACCCTATTATTGTTGGTGTCCCCCACGG
GCATCTTCTTTGCAATACACAGTAGCCCCTTCACAGCTGCCTATCATACCCGCTGAATCT
TTATCTTTACCTCCACTTTCTTCTTTGTTACCAGCCAGTAGGTCGTCCAATTTGTTGAGG
CCAACTCCATCTCTCAATGTCTCAGGCGTTCCCTCAGTAGACTTCCCAGCTTTCTTGCCT
GACCCATTGGTTCGATTACCTTTCTCTATGGCAAGTTCTCAACAGATTGCAACTTTCACT
CCTTTAATGTGTGATCCTATCGTCCACATTCCTGTTATAGATGTGTGCTCCTCAGGTCAA
GGGTACCTGGTTAGTGCGGGTCCCACCATATCAACCACCATTCCTCCCTTGCACCCAAAA
CTTGTGAACCCATTGATCCCAGAAACTGAGTCTGCAGTAGAAAAAGGTGCAAGAGAGACT
TTGCGGCTGCTCATCAATAGTTCAAGCCAGAATAATCCACAGTTGATGGATGTATTGCCG
GCTGTTCTGACAAATGCTGATGAGAAACACAGTCTACTGGTTGTGGGAAGCCGCGGTCTC
TACAATGGAACTAGAGATGTTGATGCTATTGCAAACAGCATTGTAGGCATGAGCTTGGTT
TCACTATCTGGGAGATCTATTGGATCTAGTGTCATGAGGAGTGGAGATTTGGGTTCTCAG
GCGGAGCATGCTGTTGGGTCCTTTGAATCTTGTTTGGATGACCAGGAAGGTCCCTATTTT
CCAGAGTTGAGGGAAGAAAAAGAGTGA

Peptide Sequence

PEP ID

VIT_13s0019g03390.t01
PEP Infomation

pep chromosome:12X:13:4426369:4433341:-1 gene:VIT_13s0019g03390 transcript:VIT_13s0019g03390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MENPNEQGSVDDRKIYVSDAVEEYGGEDLENSPSVESAVIGSGGSSSVSPANGGSDGEIG
LTERLTDILVEDGDGDLLLQRSNRETRVLQWLQALDLQVMGACRADERLKPLLKLNVSNG
VAEDRLLDHLIQHFDAAEVGKLARCLCIPLVSIRVGKIIKQGTLLCPTATRGNLNLTLLP
TSEMRIAFIGDDGYTERLSTLSSISQCSAVAIEEIPADNSGRSFLIKIPDCEVLYFWCSE
KSKLLGIELLAKMKDLLKRKPSLAELTGISESRLDCFATHLRAYLVGSSMGNARARPSNS
PSSSMDTIADPSELGQNAQFLPSLSKPSRSRHNSSQAVKPNSLYQCSLSPRPSSFKEGLP
RNLSSLRNAAREKFKRRGESHFSAVDNLPIASCITMDAPSSNSTEKDKLPEVVGTYPFSE
SDFLESLGKSAAAPLISPSSQIPSIGSSLFAPYYCWCPPRASSLQYTVAPSQLPIIPAES
LSLPPLSSLLPASRSSNLLRPTPSLNVSGVPSVDFPAFLPDPLVRLPFSMASSQQIATFT
PLMCDPIVHIPVIDVCSSGQGYLVSAGPTISTTIPPLHPKLVNPLIPETESAVEKGARET
LRLLINSSSQNNPQLMDVLPAVLTNADEKHSLLVVGSRGLYNGTRDVDAIANSIVGMSLV
SLSGRSIGSSVMRSGDLGSQAEHAVGSFESCLDDQEGPYFPELREEKE

Transcript Sequence

Transcript ID

VIT_13s0019g03390.t01
Transcript Infomation

cdna chromosome:12X:13:4426369:4433341:-1 gene:VIT_13s0019g03390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGCGTTTGCCTTTAGCTTCAATTTTGTCTCCGAGGCTTCTGATTTGACCGATCGCAGTTT
CTGAGTGTGAAAAATTAGGGTTTCGAGTCTTGTGGCGGTTTCTCCCTTTGTTTCAGGATT
GTATTAAAAGAATTTGCAATGGAAAACCCTAACGAACAAGGATCTGTTGATGATCGCAAG
ATCTATGTGTCCGATGCAGTGGAGGAATACGGCGGTGAGGATCTTGAGAATTCACCGTCC
GTTGAATCCGCTGTTATTGGATCTGGTGGGAGTTCTAGCGTTTCTCCGGCGAACGGTGGT
TCTGATGGTGAGATTGGTCTCACGGAGCGATTAACCGATATTCTGGTAGAAGACGGGGAT
GGAGATCTGTTGCTTCAGCGTAGCAATCGAGAAACTAGGGTTTTGCAGTGGTTGCAGGCT
CTGGATTTGCAAGTCATGGGGGCGTGTCGTGCTGATGAGAGACTGAAGCCTTTGTTGAAA
CTGAATGTCTCTAATGGTGTTGCTGAAGATCGCCTTTTAGATCATCTAATTCAGCACTTC
GATGCGGCAGAAGTTGGTAAACTAGCAAGGTGCTTGTGTATTCCTCTGGTTTCAATTCGC
GTTGGAAAGATCATTAAGCAAGGGACCCTCCTGTGCCCAACTGCTACAAGGGGAAACCTA
AATCTCACACTTCTGCCGACATCTGAAATGCGCATTGCATTCATTGGGGATGATGGTTAC
ACAGAGAGGCTGTCTACCTTAAGTAGTATTTCCCAGTGCTCTGCTGTTGCAATTGAAGAA
ATACCTGCAGACAATTCTGGAAGATCTTTCCTCATAAAGATCCCAGATTGTGAGGTTCTC
TATTTTTGGTGCTCTGAAAAGTCAAAGCTCCTGGGCATAGAATTGCTTGCAAAGATGAAG
GATTTACTCAAGAGGAAGCCATCTTTAGCTGAATTAACTGGAATCAGTGAGTCACGTCTT
GACTGCTTTGCGACCCACCTCCGTGCCTACCTTGTTGGGTCATCCATGGGCAATGCTCGA
GCAAGGCCATCCAATTCGCCATCCTCTTCAATGGATACCATAGCTGATCCTTCTGAACTA
GGTCAAAATGCTCAATTTTTGCCCTCATTGTCAAAGCCTTCACGGTCTCGACACAACAGC
AGTCAAGCAGTTAAACCAAATTCACTCTATCAATGTAGCCTGAGTCCAAGGCCAAGTTCC
TTTAAAGAGGGTCTGCCTAGGAACTTATCATCCTTGAGAAATGCTGCCAGAGAGAAGTTT
AAACGGCGTGGTGAAAGCCATTTTTCAGCTGTTGACAATCTGCCTATTGCCTCATGTATC
ACTATGGATGCACCAAGTTCAAATTCTACTGAAAAGGACAAGCTTCCGGAAGTTGTTGGA
ACATACCCATTCTCTGAGTCAGATTTTCTGGAATCACTGGGTAAATCTGCTGCTGCACCC
TTAATAAGCCCATCATCTCAAATCCCTTCGATAGGTTCATCTCTCTTCGCACCCTATTAT
TGTTGGTGTCCCCCACGGGCATCTTCTTTGCAATACACAGTAGCCCCTTCACAGCTGCCT
ATCATACCCGCTGAATCTTTATCTTTACCTCCACTTTCTTCTTTGTTACCAGCCAGTAGG
TCGTCCAATTTGTTGAGGCCAACTCCATCTCTCAATGTCTCAGGCGTTCCCTCAGTAGAC
TTCCCAGCTTTCTTGCCTGACCCATTGGTTCGATTACCTTTCTCTATGGCAAGTTCTCAA
CAGATTGCAACTTTCACTCCTTTAATGTGTGATCCTATCGTCCACATTCCTGTTATAGAT
GTGTGCTCCTCAGGTCAAGGGTACCTGGTTAGTGCGGGTCCCACCATATCAACCACCATT
CCTCCCTTGCACCCAAAACTTGTGAACCCATTGATCCCAGAAACTGAGTCTGCAGTAGAA
AAAGGTGCAAGAGAGACTTTGCGGCTGCTCATCAATAGTTCAAGCCAGAATAATCCACAG
TTGATGGATGTATTGCCGGCTGTTCTGACAAATGCTGATGAGAAACACAGTCTACTGGTT
GTGGGAAGCCGCGGTCTCTACAATGGAACTAGAGATGTTGATGCTATTGCAAACAGCATT
GTAGGCATGAGCTTGGTTTCACTATCTGGGAGATCTATTGGATCTAGTGTCATGAGGAGT
GGAGATTTGGGTTCTCAGGCGGAGCATGCTGTTGGGTCCTTTGAATCTTGTTTGGATGAC
CAGGAAGGTCCCTATTTTCCAGAGTTGAGGGAAGAAAAAGAGTGACGGAGGGAGGAGAGA
AATCCATTATGTTTAGAAGACATTACCATATCCTTTGTTATTTCATGTGGGTGTGTGTTA
CTTTGTAAATCTCTTCTTTGGGCCCTGAAAATGTAGATATGTGTGGGTAGGCTTTACCCT
TACTAGAGATTGTAATTGATGTACATCAAGCCATTTGTGTGGTGGTGTTGTCAATGCATA
TTATTCTGGTGTTGATTAG