Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g03380.t01
CDS Infomation

cds chromosome:12X:13:4412475:4417408:-1 gene:VIT_13s0019g03380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGATGGAAACGAGAGAAAGGTGAGTCGTGAAATGCTTGATATGGCGGATCGGGGA
ATGTCTGATGAGGTTCTGAATTGTGTGATGCCATATATTCACGACCCGAAGGACCGTGAT
GCGGTCTCTCTAGTGTGCCGTAGATGGTACGAGCTGGATGCGTTGACGAGGAAACATATT
ACAATTGCTTTGTGCTACACGACCACTCCTGGTCGATTAAGGGGGAGGTTTCCGCATCTT
GAATCCCTAAAATTGAAGGGTAAACCTAGGGCGGCCATGTTTAATCTGATAATGGAGGAT
TGGGGAGGGTATGTGACTCCATGGGTTAAGGAGATCTCAGATTATTTTGATTGTTTGAAG
TCGCTTCACTTTCGGCGCATGATTGTGAAGGATTCCGATTTACAACTTCTTGCTCAAGCT
CGGGGACGTGTGCTCCTGGTGCTTAAACTCGATAAGTGCTCTGGGTTTTCCACAGATGGG
CTTCTACATGTGGGTCGGTCTTGCAGGAATTTAAGAACCTTGTTTTTGGAAGAGAGCCAA
ATTGTGGATAAAGATGGGGAATGGCTCCATGAGCTGGCAATGAACAATACAGTTCTTGAA
ACTTTGAATTTTTACATGACGGAGCTTGCAACAGTCCAATTTGAAGACCTAGAACTCATT
GCTAGAAATTGTCGATCTTTAACCTCTATGAAAATTAGTGATTTTGAAATCTTGGACCTA
GTTGGTTTCTTCCGTGCTGCAACTGCACTAGAAGAGTTTGCTGGGGGTTCTTTTAGTGAA
CAATCAGATAAATACTCCGCGGTATCGTTCCCCCCAAAATTATGCCGTCTGGGTCTAAAC
TACATGGGGAAGAATGAAATGCCCATAGTATTCCCTTTTGCATCCCTACTTAAAAAGTTG
GATCTACTCTATTGCTTGCTTGACACAGAGGACCATTGTCTGTTAATTCAAAAGTGCCCC
AACTTGGAATTTCTTGAGGCCAGGAACGTGATTGGAGACAGAGGATTAGAAGTTCTTGCT
CAGAGTTGTAAAAAATTAAGGAGGCTTAGGATTGAGAGAGGTGCTGATGAGCAGGAAATG
GAGGATGAAGAAGGTGTAGTTTCACAGAGAGGATTAATGGCTTTGGCTCGGGGATGCCTG
GAGATAGAATATGTGGCCATTTATGTGTCCGATATCACAAATGCTGCTCTAGAATGTATT
GGTGCTCACTCAAAAAAGCTATGTGATTTTCGCCTCGTCTTGCTCGAACGGGAAGAAAGG
ATAACAGATTTGCCATTGGACAATGGAGTTCGAGCTCTACTGAGGGGTTGCCAAAAGCTT
AGAAGATTCGCTCTGTACCTCCGTTCAGGTGGTTTGACTGATGTGGGTCTCAATTATATT
GGACAGTACAGCCCAAATGTTAGATGGATGCTTCTTGGTTATGTTGGAGAATCAGATGCA
GGGCTTTTGGAGTTCTCTAGAGGTTGCCCTAGCCTGCAAAAACTAGAGATGAGGGGCTGT
TGCTTCAGTGAGCGTGCACTGGCTGTTGCAGCAATGCAACTGACGTCACTGAGGTATTTG
TGGGTGCAAGGGTATAGAGCATCTGAAACAGGCCGTGATCTATTAGTCATGGCTCGCCCA
TTCTGGAATATCGAGTTAATTCCTTCAAGAGGAGTTACTATTAATGCTCCGGATAGGGAA
CCTGTGTCCATCGAGCATCCAGCACATATACTTGCATACTACTCACTTGCTGGACCAAGA
ACAGATTTTCCAAGTACTGTTACTCCCTTGGACCCTGCATCTTTTCTTACGTTGTAG

Peptide Sequence

PEP ID

VIT_13s0019g03380.t01
PEP Infomation

pep chromosome:12X:13:4412475:4417408:-1 gene:VIT_13s0019g03380 transcript:VIT_13s0019g03380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEDGNERKVSREMLDMADRGMSDEVLNCVMPYIHDPKDRDAVSLVCRRWYELDALTRKHI
TIALCYTTTPGRLRGRFPHLESLKLKGKPRAAMFNLIMEDWGGYVTPWVKEISDYFDCLK
SLHFRRMIVKDSDLQLLAQARGRVLLVLKLDKCSGFSTDGLLHVGRSCRNLRTLFLEESQ
IVDKDGEWLHELAMNNTVLETLNFYMTELATVQFEDLELIARNCRSLTSMKISDFEILDL
VGFFRAATALEEFAGGSFSEQSDKYSAVSFPPKLCRLGLNYMGKNEMPIVFPFASLLKKL
DLLYCLLDTEDHCLLIQKCPNLEFLEARNVIGDRGLEVLAQSCKKLRRLRIERGADEQEM
EDEEGVVSQRGLMALARGCLEIEYVAIYVSDITNAALECIGAHSKKLCDFRLVLLEREER
ITDLPLDNGVRALLRGCQKLRRFALYLRSGGLTDVGLNYIGQYSPNVRWMLLGYVGESDA
GLLEFSRGCPSLQKLEMRGCCFSERALAVAAMQLTSLRYLWVQGYRASETGRDLLVMARP
FWNIELIPSRGVTINAPDREPVSIEHPAHILAYYSLAGPRTDFPSTVTPLDPASFLTL

Transcript Sequence

Transcript ID

VIT_13s0019g03380.t01
Transcript Infomation

cdna chromosome:12X:13:4412475:4417408:-1 gene:VIT_13s0019g03380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGATGGAAACGAGAGAAAGGTGAGTCGTGAAATGCTTGATATGGCGGATCGGGGA
ATGTCTGATGAGGTTCTGAATTGTGTGATGCCATATATTCACGACCCGAAGGACCGTGAT
GCGGTCTCTCTAGTGTGCCGTAGATGGTACGAGCTGGATGCGTTGACGAGGAAACATATT
ACAATTGCTTTGTGCTACACGACCACTCCTGGTCGATTAAGGGGGAGGTTTCCGCATCTT
GAATCCCTAAAATTGAAGGGTAAACCTAGGGCGGCCATGTTTAATCTGATAATGGAGGAT
TGGGGAGGGTATGTGACTCCATGGGTTAAGGAGATCTCAGATTATTTTGATTGTTTGAAG
TCGCTTCACTTTCGGCGCATGATTGTGAAGGATTCCGATTTACAACTTCTTGCTCAAGCT
CGGGGACGTGTGCTCCTGGTGCTTAAACTCGATAAGTGCTCTGGGTTTTCCACAGATGGG
CTTCTACATGTGGGTCGGTCTTGCAGGAATTTAAGAACCTTGTTTTTGGAAGAGAGCCAA
ATTGTGGATAAAGATGGGGAATGGCTCCATGAGCTGGCAATGAACAATACAGTTCTTGAA
ACTTTGAATTTTTACATGACGGAGCTTGCAACAGTCCAATTTGAAGACCTAGAACTCATT
GCTAGAAATTGTCGATCTTTAACCTCTATGAAAATTAGTGATTTTGAAATCTTGGACCTA
GTTGGTTTCTTCCGTGCTGCAACTGCACTAGAAGAGTTTGCTGGGGGTTCTTTTAGTGAA
CAATCAGATAAATACTCCGCGGTATCGTTCCCCCCAAAATTATGCCGTCTGGGTCTAAAC
TACATGGGGAAGAATGAAATGCCCATAGTATTCCCTTTTGCATCCCTACTTAAAAAGTTG
GATCTACTCTATTGCTTGCTTGACACAGAGGACCATTGTCTGTTAATTCAAAAGTGCCCC
AACTTGGAATTTCTTGAGGCCAGGAACGTGATTGGAGACAGAGGATTAGAAGTTCTTGCT
CAGAGTTGTAAAAAATTAAGGAGGCTTAGGATTGAGAGAGGTGCTGATGAGCAGGAAATG
GAGGATGAAGAAGGTGTAGTTTCACAGAGAGGATTAATGGCTTTGGCTCGGGGATGCCTG
GAGATAGAATATGTGGCCATTTATGTGTCCGATATCACAAATGCTGCTCTAGAATGTATT
GGTGCTCACTCAAAAAAGCTATGTGATTTTCGCCTCGTCTTGCTCGAACGGGAAGAAAGG
ATAACAGATTTGCCATTGGACAATGGAGTTCGAGCTCTACTGAGGGGTTGCCAAAAGCTT
AGAAGATTCGCTCTGTACCTCCGTTCAGGTGGTTTGACTGATGTGGGTCTCAATTATATT
GGACAGTACAGCCCAAATGTTAGATGGATGCTTCTTGGTTATGTTGGAGAATCAGATGCA
GGGCTTTTGGAGTTCTCTAGAGGTTGCCCTAGCCTGCAAAAACTAGAGATGAGGGGCTGT
TGCTTCAGTGAGCGTGCACTGGCTGTTGCAGCAATGCAACTGACGTCACTGAGGTATTTG
TGGGTGCAAGGGTATAGAGCATCTGAAACAGGCCGTGATCTATTAGTCATGGCTCGCCCA
TTCTGGAATATCGAGTTAATTCCTTCAAGAGGAGTTACTATTAATGCTCCGGATAGGGAA
CCTGTGTCCATCGAGCATCCAGCACATATACTTGCATACTACTCACTTGCTGGACCAAGA
ACAGATTTTCCAAGTACTGTTACTCCCTTGGACCCTGCATCTTTTCTTACGTTGTAGAAC
TGTATATCCTTTTCCAGAAGTTATCTTTTCCCTGTCATGTTGCCCTGTTAGGTGTCTTGT
TAATAAGTTGGTGTATCTTTCTCTCTTTTTCCCTGGAAGACGGTTTTCATCTGCAAATTT
CATTCCATATCCTATTTCTAGACTGCTGTCCTGTAATAAGTTTGTGATTTCTTTTGTAGT
CTGCAAGCACTTGCACTCTTGGTGCATCTCTGTGTTAACTCCCATGGGCAATGAGTTCAA
TTTTCAACCCACTTTTGGATTGTATTAATTCTACGGCAAGTAAATCTTTTTGCAAATA