Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g02640.t01
CDS Infomation

cds chromosome:12X:13:3902102:3904783:1 gene:VIT_13s0019g02640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGGGATAGTGTCTGTGTTCCCAAATGAAAAGATGCAACTCTTCACAACAAGGTCA
TGGGACTTCATAGGCTTCCCCCAGGATGTTGAAAGAACAACTACTGAAAGTGATATCATT
GTTGGAATAATTGACAGTGGGATCTGGCCTGAATCTGCTAGTTTCAATGCCAAAGGATTC
AGTCCGCCACCAAGAAAATGGAAGGGCACTTGTCAAACCTCATCCAACTTCACTAGTTGC
AACAATAAAATCATTGGAGCTAGATACTACCATACTGGTGCAGAAGTTGAACCAAATGAG
TATGACTCACCAAGAGATTCAGATGGCCATGGGACACACACTGCATCCATAGTAGCTGGA
GGCTTAGTTTCTGGGGCAAGCTTACTAGGCTTTGGGTCAGGAACAGCTAGAGGAGGGGTA
CCATCAGCCCGTATTGCAGTATATAAGGTATGTTGGTCTAAGGGTTGTTATAGTGCTGAT
GTCCTCGCAGCTTTTGATGATGCAATTGCCGATGGAGTTGATATAATTTCTGTTTCCTTG
GGGGGATATTCCCCAAATTATTTCGAAAATCCAATTGCAATCGGAGCTTTCCATGCTCTG
AAAAATGGGATTCTCACATCAACTGCTGTTGGTAACTATGGTCATAATCGTGCAACTATC
ACAAATTTGTGGCCTTGGTCTCTCTCAGTCGCTGCTAGCACCATTGACAGAAAGTTTGTG
ACCAAGGTGCAGTTGGGAAACAACCAGGTTTATGAGGGAGTCTCTATAAACACTTTCGAG
ATGAATGATATGTACCCCATCATCTATGGTGGAGATGCACAAAATACTACTGGAGGTAAT
AGTGAATATTCCAGCTTATGTGACAAGAACTCCTTGAACAAGTCTCTGGTAAATGGTAAA
ATTGTCCTCTGTGATGCACTCAATTGGGGGGAGGAAGCAACAACTGCTGGAGCAGTGGGC
ATGATAATGCGAGATGGAGCCCTCAAAGATTTTTCCTTGAGTTTTTCTTTACCTGCATCC
TACATGGACTGGAGCAATGGTACTGAACTCGATCAGTACTTAAACTCAACTAGACCAACT
GCAAAGATAAATAGGAGCGTCGAGGTTAAAGATGAATTGGCCCCATTTATAGTTTCATTT
TCATCGAGGGGTCCCAACCTTATAACACGGGACATTCTCAAGCCCGACTTAAGTGCACCT
GGAGTGAACATTCTAGCAGCATGGTCAGAAGCTTCAACTGTGACTGGAAAAGAATGGGAT
ACAAGAGTAGTTCCATATAATATAATGTCTGGGACATCCATGGCTTGCCCACATGCTTCC
GGGGCTGCTGCCTATATCAAATCATTTCACCCAACATGGTCTCCTTCTGCTATTAAGTCT
GCTCTAATGACAACTGCTTCTCCTATGAGGGGTGAAATTAATACCGATCTGGAGTTTTCA
TACGGATCAGGGCAGGTAGATCCTGTAAAGGCCGCAAATCCCGGTTTGGTATATGATGCT
GGCGAGACGGATTACATCAAATTTTTGTGTGGGGAAGGCTATGGCAATGCAAAGTTACAG
CTGATAACTGGAGATAACACTAGCTGCTCTGCAGACACAAATGGAACTGTCTGGGCTTTA
AACTACCCATCTTTTGCTGTATCTACCAAGTACAAGGTTAGCATTACTCGCAACTTCACA
AGGACAGTCACCAATGTTGGAACACCGGCATCAACTTATAAGGCAAATGTAACTGTCCCT
CCCAGACTATGTGTCCAAGTTGAACCAAGTATTCTTTCATTCAAATCCCTTGGCCAGAAG
AAGACTTTCTCTGTCACAGTACGGGTGCCAGCACTAGATACAGCTATAATATCAGGCTCC
TTGGTGTGGAATGATGGGGTTTACCAAGTGAGGAGCCCCATAGTTGCTTATCTTTACTAG

Peptide Sequence

PEP ID

VIT_13s0019g02640.t01
PEP Infomation

pep chromosome:12X:13:3902102:3904783:1 gene:VIT_13s0019g02640 transcript:VIT_13s0019g02640.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEGIVSVFPNEKMQLFTTRSWDFIGFPQDVERTTTESDIIVGIIDSGIWPESASFNAKGF
SPPPRKWKGTCQTSSNFTSCNNKIIGARYYHTGAEVEPNEYDSPRDSDGHGTHTASIVAG
GLVSGASLLGFGSGTARGGVPSARIAVYKVCWSKGCYSADVLAAFDDAIADGVDIISVSL
GGYSPNYFENPIAIGAFHALKNGILTSTAVGNYGHNRATITNLWPWSLSVAASTIDRKFV
TKVQLGNNQVYEGVSINTFEMNDMYPIIYGGDAQNTTGGNSEYSSLCDKNSLNKSLVNGK
IVLCDALNWGEEATTAGAVGMIMRDGALKDFSLSFSLPASYMDWSNGTELDQYLNSTRPT
AKINRSVEVKDELAPFIVSFSSRGPNLITRDILKPDLSAPGVNILAAWSEASTVTGKEWD
TRVVPYNIMSGTSMACPHASGAAAYIKSFHPTWSPSAIKSALMTTASPMRGEINTDLEFS
YGSGQVDPVKAANPGLVYDAGETDYIKFLCGEGYGNAKLQLITGDNTSCSADTNGTVWAL
NYPSFAVSTKYKVSITRNFTRTVTNVGTPASTYKANVTVPPRLCVQVEPSILSFKSLGQK
KTFSVTVRVPALDTAIISGSLVWNDGVYQVRSPIVAYLY

Transcript Sequence

Transcript ID

VIT_13s0019g02640.t01
Transcript Infomation

cdna chromosome:12X:13:3902102:3904783:1 gene:VIT_13s0019g02640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCAGACATGGAGGGGATAGTGTCTGTGTTCCCAAATGAAAAGATGCAACTCTTCACAACA
AGGTCATGGGACTTCATAGGCTTCCCCCAGGATGTTGAAAGAACAACTACTGAAAGTGAT
ATCATTGTTGGAATAATTGACAGTGGGATCTGGCCTGAATCTGCTAGTTTCAATGCCAAA
GGATTCAGTCCGCCACCAAGAAAATGGAAGGGCACTTGTCAAACCTCATCCAACTTCACT
AGTTGCAACAATAAAATCATTGGAGCTAGATACTACCATACTGGTGCAGAAGTTGAACCA
AATGAGTATGACTCACCAAGAGATTCAGATGGCCATGGGACACACACTGCATCCATAGTA
GCTGGAGGCTTAGTTTCTGGGGCAAGCTTACTAGGCTTTGGGTCAGGAACAGCTAGAGGA
GGGGTACCATCAGCCCGTATTGCAGTATATAAGGTATGTTGGTCTAAGGGTTGTTATAGT
GCTGATGTCCTCGCAGCTTTTGATGATGCAATTGCCGATGGAGTTGATATAATTTCTGTT
TCCTTGGGGGGATATTCCCCAAATTATTTCGAAAATCCAATTGCAATCGGAGCTTTCCAT
GCTCTGAAAAATGGGATTCTCACATCAACTGCTGTTGGTAACTATGGTCATAATCGTGCA
ACTATCACAAATTTGTGGCCTTGGTCTCTCTCAGTCGCTGCTAGCACCATTGACAGAAAG
TTTGTGACCAAGGTGCAGTTGGGAAACAACCAGGTTTATGAGGGAGTCTCTATAAACACT
TTCGAGATGAATGATATGTACCCCATCATCTATGGTGGAGATGCACAAAATACTACTGGA
GGTAATAGTGAATATTCCAGCTTATGTGACAAGAACTCCTTGAACAAGTCTCTGGTAAAT
GGTAAAATTGTCCTCTGTGATGCACTCAATTGGGGGGAGGAAGCAACAACTGCTGGAGCA
GTGGGCATGATAATGCGAGATGGAGCCCTCAAAGATTTTTCCTTGAGTTTTTCTTTACCT
GCATCCTACATGGACTGGAGCAATGGTACTGAACTCGATCAGTACTTAAACTCAACTAGA
CCAACTGCAAAGATAAATAGGAGCGTCGAGGTTAAAGATGAATTGGCCCCATTTATAGTT
TCATTTTCATCGAGGGGTCCCAACCTTATAACACGGGACATTCTCAAGCCCGACTTAAGT
GCACCTGGAGTGAACATTCTAGCAGCATGGTCAGAAGCTTCAACTGTGACTGGAAAAGAA
TGGGATACAAGAGTAGTTCCATATAATATAATGTCTGGGACATCCATGGCTTGCCCACAT
GCTTCCGGGGCTGCTGCCTATATCAAATCATTTCACCCAACATGGTCTCCTTCTGCTATT
AAGTCTGCTCTAATGACAACTGCTTCTCCTATGAGGGGTGAAATTAATACCGATCTGGAG
TTTTCATACGGATCAGGGCAGGTAGATCCTGTAAAGGCCGCAAATCCCGGTTTGGTATAT
GATGCTGGCGAGACGGATTACATCAAATTTTTGTGTGGGGAAGGCTATGGCAATGCAAAG
TTACAGCTGATAACTGGAGATAACACTAGCTGCTCTGCAGACACAAATGGAACTGTCTGG
GCTTTAAACTACCCATCTTTTGCTGTATCTACCAAGTACAAGGTTAGCATTACTCGCAAC
TTCACAAGGACAGTCACCAATGTTGGAACACCGGCATCAACTTATAAGGCAAATGTAACT
GTCCCTCCCAGACTATGTGTCCAAGTTGAACCAAGTATTCTTTCATTCAAATCCCTTGGC
CAGAAGAAGACTTTCTCTGTCACAGTACGGGTGCCAGCACTAGATACAGCTATAATATCA
GGCTCCTTGGTGTGGAATGATGGGGTTTACCAAGTGAGGAGCCCCATAGTTGCTTATCTT
TACTAGTTTTAAATGTCATTGTATTTGTCCCATGAATAAACAAACAGACTGAAAGTGTGT
TTTGTAATTGAATAAAATCTCTCTGTTTTATTC