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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g02630.t01
CDS Infomation

cds chromosome:12X:13:3884948:3890320:-1 gene:VIT_13s0019g02630 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II protein D1 [Source:UniProtKB/TrEMBL;Acc:F6HNS1]
Sequence

ATGACTGTAATTTTAGAGAGACGCGAAAGCGAAAGCCTATGGGGTCGCTTCTGTAACTGG
ATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCGACC
TTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCCCCTCCAGTAGATATT
GATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATCTCTGGT
GCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCAGCA
TCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTA
CTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGC
CCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATC
TACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTC
AACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTA
GGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACC
TCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGCAGGTTACAGATTCGGT
CAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTGATCTTC
CAATATGCTAGTTTCAATAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTA
GTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTC
AATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGGCTGATATT
ATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCT
CTAGATCTAGCTGCTGTTGAAGCTCCATCTATAAATACCGAGGCAAAGTGGTTTATGATT
GAATCTCAGAGGCATTCTTTTCATTTGGTAGATCCAAGTCCAATAGAACAAGTACCAAGC
GAACCCTGGGACTGGCATTGTTTAACAGCTAAAACGGAAATGATGACTTTTTCGTTCGCT
TTACTATTTTTTATAGGGGGCCTCCTCCTACTACATTTTCTAAAGAAAAAAAACTTTTCG
AGAGACATTTTTCATGCCAATTCTTTGTCTTTGGACAGGACTCTCTTCTTTTTTCTTTTT
CTTTTGATCATAATCCATAATATCCACTTTACAGTCGGCTTTTGTGACTGTAATCCACGG
GAACTAATACTTTCTAGTCAAAGTCTCATCGCCTANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCT
GATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAAT
TTCCCTCTAGATCTAGCTGCTGTTGAAGCTCCATCTATAAATACCGAGGCAAAGTGGTTT
ATGATTGAATCTCAGAGGCATTCTTTTCATTTGGTAGATCCAAGTCCAATAGAACAAGTA
CCAAGCGAACCCTGGGACTGGCATTGTTTAACAGCTAAAACGGAAATGATGACTTTTTCG
TTCGCTTTACTATTTTTTATAGGGGGCCTCCTCCTACTACATTTTCTAAAGAAAAAAAAC
TTTTCGAGAGACATTTTTCATGCCAATTCTTTGTCTTTGGACAGGACTCTCTTCTTTTTT
CTTTTTCTTTTGATCATAATCCATAATATCCACTTTACAGTCGGCTTTTGTGACTGTAAT
CCACTGAAATCACTTGGTGCATTGAGTGAGGGCACGATGGATAGAGAATTATTTTTGGCA
GTGAGATTGAGCAGTGAAGGAGTAGGGGGACTAGGCTTGGGTTATAGGGTGAATTGGATT
TTTTGTTGTATCTAA

Peptide Sequence

PEP ID

VIT_13s0019g02630.t01
PEP Infomation

pep chromosome:12X:13:3884948:3890320:-1 gene:VIT_13s0019g02630 transcript:VIT_13s0019g02630.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II protein D1 [Source:UniProtKB/TrEMBL;Acc:F6HNS1]
Sequence

MTVILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYRFG
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSINTEAKWFMI
ESQRHSFHLVDPSPIEQVPSEPWDWHCLTAKTEMMTFSFALLFFIGGLLLLHFLKKKNFS
RDIFHANSLSLDRTLFFFLFLLIIIHNIHFTVGFCDCNPRELILSSQSLIAXXXXXXXXX
XXXXXXXXXXXXXXXXXXXADIINRANLGMEVMHERNAHNFPLDLAAVEAPSINTEAKWF
MIESQRHSFHLVDPSPIEQVPSEPWDWHCLTAKTEMMTFSFALLFFIGGLLLLHFLKKKN
FSRDIFHANSLSLDRTLFFFLFLLIIIHNIHFTVGFCDCNPLKSLGALSEGTMDRELFLA
VRLSSEGVGGLGLGYRVNWIFCCI

Transcript Sequence

Transcript ID

VIT_13s0019g02630.t01
Transcript Infomation

cdna chromosome:12X:13:3884948:3890320:-1 gene:VIT_13s0019g02630 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II protein D1 [Source:UniProtKB/TrEMBL;Acc:F6HNS1]
Sequence

TCTATTTTTAGATAATTCGTGTGCTTGGGAGTCCCTGATGATTAAATAAACCAAGATTTT
ACCATGACTGTAATTTTAGAGAGACGCGAAAGCGAAAGCCTATGGGGTCGCTTCTGTAAC
TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCG
ACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCCCCTCCAGTAGAT
ATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATCTCT
GGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCA
GCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC
TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG
CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTG
ATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACT
TTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG
TTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTA
ACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGCAGGTTACAGATTC
GGTCAAGAGGAAGAAACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTGATC
TTCCAATATGCTAGTTTCAATAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCT
GTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGT
TTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGGCTGAT
ATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTC
CCTCTAGATCTAGCTGCTGTTGAAGCTCCATCTATAAATACCGAGGCAAAGTGGTTTATG
ATTGAATCTCAGAGGCATTCTTTTCATTTGGTAGATCCAAGTCCAATAGAACAAGTACCA
AGCGAACCCTGGGACTGGCATTGTTTAACAGCTAAAACGGAAATGATGACTTTTTCGTTC
GCTTTACTATTTTTTATAGGGGGCCTCCTCCTACTACATTTTCTAAAGAAAAAAAACTTT
TCGAGAGACATTTTTCATGCCAATTCTTTGTCTTTGGACAGGACTCTCTTCTTTTTTCTT
TTTCTTTTGATCATAATCCATAATATCCACTTTACAGTCGGCTTTTGTGACTGTAATCCA
CGGGAACTAATACTTTCTAGTCAAAGTCTCATCGCCTANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGG
GCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCAT
AATTTCCCTCTAGATCTAGCTGCTGTTGAAGCTCCATCTATAAATACCGAGGCAAAGTGG
TTTATGATTGAATCTCAGAGGCATTCTTTTCATTTGGTAGATCCAAGTCCAATAGAACAA
GTACCAAGCGAACCCTGGGACTGGCATTGTTTAACAGCTAAAACGGAAATGATGACTTTT
TCGTTCGCTTTACTATTTTTTATAGGGGGCCTCCTCCTACTACATTTTCTAAAGAAAAAA
AACTTTTCGAGAGACATTTTTCATGCCAATTCTTTGTCTTTGGACAGGACTCTCTTCTTT
TTTCTTTTTCTTTTGATCATAATCCATAATATCCACTTTACAGTCGGCTTTTGTGACTGT
AATCCACTGAAATCACTTGGTGCATTGAGTGAGGGCACGATGGATAGAGAATTATTTTTG
GCAGTGAGATTGAGCAGTGAAGGAGTAGGGGGACTAGGCTTGGGTTATAGGGTGAATTGG
ATTTTTTGTTGTATCTAA