Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g02450.t01
CDS Infomation

cds chromosome:12X:13:3701110:3706090:-1 gene:VIT_13s0019g02450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGACAGTCATCAACCCTTCAGGCTCCCTCAGCAAAGTAAAAGAGAAAATCCCCGC
CTCTTTCTTCAAAACAACCACCCACAGCTTTTCTCCACCTTCCAACATGCCCCAGTTCAC
CAGCTTCATTGCCCTGATCAGAACCCAAACCCTGCAGGTTTTGTTAACAGCGAAGGAGTG
CATGTGGTTGGGCCCTCCTCTGCGTCTTTTTCTTTCCCTAGTTGCGGTGACCATTCTCTC
TCCTCCATTCACAACGCTAAAGACTTGGACCACCGTTTCTCCTTTGGCGCTGACGCTGTG
TCTTTATCTCTGGCTCCTCACCATCGCCACCAACGGTGTGCTCCTCTGGAGCTGAATGCG
AAGAGATACGACGTCGTTTCCGTTCGAGGAGGAACTCCGAAGCCGAACAACGAATTGAGA
AGTTCGGTTCCGCTTGGTCCTTTCACAGGCTACGCATCGATCTTGAAGCGATCCAGCTTT
TTGAGCCCTGCGCAGCAGCTTTTAGACGATTTTTGTGGCGTAGGCCGTGGAGTTTCCGAT
TCGGCGTCATTTGATCCTCCGTTGGAAGGAAGTGGAACCGCTGAAGATCCGATCGGTTGC
AGCCATGGCAGCGAGCATTTCTGGAAGAGCTCCAGGCTCGCACCGATGCTCGACGAGGTT
TACAGGAGATATAAGCTTTACTGTCAGCAGATGCATTCTGTAGTTGCATCGTTTGAAACT
GTTGCTGGGCTTCAAAATGCTGCTCCATACATATCTTTTGCGTTCAAAGCCATGTCAAAT
CATTTCAGGTACTTGAAGAATGCAATTTTGGATCAAATTCAGTTTACAGGCAAAGCTCTT
GTAGGCCATAATATTGGAAAAGACGAAACTCCAAGAGTTTGGACAGCTGACCAGGGGTTT
CATAGCCAAAAAGCAGTTCAGAGCTCAATGTTTCTTCAACATCCTATTTGGCGGTCCCAA
AGAGGACTTCCAGATCATGCGGTAGCTGTACTCAGGGCATGGTTGTTTGAACACTTTCTA
CATCCTTATCCTACTGACTTGGAGAAGCAAATTTTGGCCCAACGAACAAGCCTATCAAGA
AATCAGGTTTCCAACTGGTTCATCAATGCAAGAGTTAGACTATGGAAGCCAATGGTAGAA
GAAATACTCACGCTTGAGACAAAGCAAGCTCAAATGGCAGCAGAGGGAGAGGCTAACAAG
CCAACTGACCCCCTTCCTTCAGCAAATCCACTGCCTCTCAGGAAACCCTTTCAAAACACA
CCCACCCAAAAGATGGAAGATACTCAGTCTAAACGAAGTAGAAATAAACTCTCCTATATG
TTCGAACAAAGAGATGAACAAACGAACTTTCCTTACAATAATTTCTCAAGCAATTACCAA
ATGGGTGTTAGTGGAATTGAGAAAAGTGCAAGCAAAGGCATATCTTTAGCATTGGGTCTC
CACCAAAATAACAGAATTGAGTCATCTACGAGCTTTTTTCAGCCTGGAAACAAATAG

Peptide Sequence

PEP ID

VIT_13s0019g02450.t01
PEP Infomation

pep chromosome:12X:13:3701110:3706090:-1 gene:VIT_13s0019g02450 transcript:VIT_13s0019g02450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADSHQPFRLPQQSKRENPRLFLQNNHPQLFSTFQHAPVHQLHCPDQNPNPAGFVNSEGV
HVVGPSSASFSFPSCGDHSLSSIHNAKDLDHRFSFGADAVSLSLAPHHRHQRCAPLELNA
KRYDVVSVRGGTPKPNNELRSSVPLGPFTGYASILKRSSFLSPAQQLLDDFCGVGRGVSD
SASFDPPLEGSGTAEDPIGCSHGSEHFWKSSRLAPMLDEVYRRYKLYCQQMHSVVASFET
VAGLQNAAPYISFAFKAMSNHFRYLKNAILDQIQFTGKALVGHNIGKDETPRVWTADQGF
HSQKAVQSSMFLQHPIWRSQRGLPDHAVAVLRAWLFEHFLHPYPTDLEKQILAQRTSLSR
NQVSNWFINARVRLWKPMVEEILTLETKQAQMAAEGEANKPTDPLPSANPLPLRKPFQNT
PTQKMEDTQSKRSRNKLSYMFEQRDEQTNFPYNNFSSNYQMGVSGIEKSASKGISLALGL
HQNNRIESSTSFFQPGNK

Transcript Sequence

Transcript ID

VIT_13s0019g02450.t01
Transcript Infomation

cdna chromosome:12X:13:3701110:3706090:-1 gene:VIT_13s0019g02450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTTGTGTGTGGACGCTGCTGCGCCCACAGCCTGCCCTGAGTGTCCTCCTCTCCTTTCTT
TCAACTTCATCACCATTCGCCTCTTCTCTCTCTCTCTCTGGTTGTTGAAGCTTCATCAAT
GGCGGACAGTCATCAACCCTTCAGGCTCCCTCAGCAAAGTAAAAGAGAAAATCCCCGCCT
CTTTCTTCAAAACAACCACCCACAGCTTTTCTCCACCTTCCAACATGCCCCAGTTCACCA
GCTTCATTGCCCTGATCAGAACCCAAACCCTGCAGGTTTTGTTAACAGCGAAGGAGTGCA
TGTGGTTGGGCCCTCCTCTGCGTCTTTTTCTTTCCCTAGTTGCGGTGACCATTCTCTCTC
CTCCATTCACAACGCTAAAGACTTGGACCACCGTTTCTCCTTTGGCGCTGACGCTGTGTC
TTTATCTCTGGCTCCTCACCATCGCCACCAACGGTGTGCTCCTCTGGAGCTGAATGCGAA
GAGATACGACGTCGTTTCCGTTCGAGGAGGAACTCCGAAGCCGAACAACGAATTGAGAAG
TTCGGTTCCGCTTGGTCCTTTCACAGGCTACGCATCGATCTTGAAGCGATCCAGCTTTTT
GAGCCCTGCGCAGCAGCTTTTAGACGATTTTTGTGGCGTAGGCCGTGGAGTTTCCGATTC
GGCGTCATTTGATCCTCCGTTGGAAGGAAGTGGAACCGCTGAAGATCCGATCGGTTGCAG
CCATGGCAGCGAGCATTTCTGGAAGAGCTCCAGGCTCGCACCGATGCTCGACGAGGTTTA
CAGGAGATATAAGCTTTACTGTCAGCAGATGCATTCTGTAGTTGCATCGTTTGAAACTGT
TGCTGGGCTTCAAAATGCTGCTCCATACATATCTTTTGCGTTCAAAGCCATGTCAAATCA
TTTCAGGTACTTGAAGAATGCAATTTTGGATCAAATTCAGTTTACAGGCAAAGCTCTTGT
AGGCCATAATATTGGAAAAGACGAAACTCCAAGAGTTTGGACAGCTGACCAGGGGTTTCA
TAGCCAAAAAGCAGTTCAGAGCTCAATGTTTCTTCAACATCCTATTTGGCGGTCCCAAAG
AGGACTTCCAGATCATGCGGTAGCTGTACTCAGGGCATGGTTGTTTGAACACTTTCTACA
TCCTTATCCTACTGACTTGGAGAAGCAAATTTTGGCCCAACGAACAAGCCTATCAAGAAA
TCAGGTTTCCAACTGGTTCATCAATGCAAGAGTTAGACTATGGAAGCCAATGGTAGAAGA
AATACTCACGCTTGAGACAAAGCAAGCTCAAATGGCAGCAGAGGGAGAGGCTAACAAGCC
AACTGACCCCCTTCCTTCAGCAAATCCACTGCCTCTCAGGAAACCCTTTCAAAACACACC
CACCCAAAAGATGGAAGATACTCAGTCTAAACGAAGTAGAAATAAACTCTCCTATATGTT
CGAACAAAGAGATGAACAAACGAACTTTCCTTACAATAATTTCTCAAGCAATTACCAAAT
GGGTGTTAGTGGAATTGAGAAAAGTGCAAGCAAAGGCATATCTTTAGCATTGGGTCTCCA
CCAAAATAACAGAATTGAGTCATCTACGAGCTTTTTTCAGCCTGGAAACAAATAG