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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g02340.t01
CDS Infomation

cds chromosome:12X:13:3590205:3599573:-1 gene:VIT_13s0019g02340 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:D7TLM7]
Sequence

ATGAAAGTGTTGTTTGGGAGCCCAGGGAGGCTGAGTGGGCTTGTTCTGAGAATGGGACAG
TGTTCTTTTGCTGCTTCTTCTATTGGGATAATGCTATCTGCTTCTGGGTATTCTGCTTCC
ACTGCCTTCTGCTACTTAATTGCCTCCATGGGCCTTCAAATCCTGTGGAGTTTCACACTT
GCATGCGTTGATATGCAAGCTTTAAGATTAAGAAGAAACCTTCAACATCCTGTCTTGCTG
AGCCTATTTGTTGTTGGTGATTGGGTGACATCTCTGCTCTCGCTTGCAGCTGCAAGCGCG
TCGGCTGGTGTGGTTCTCCTGTATGCAAGAGACTTGAATTTCTGCAGCTCAATAATCCAT
CCTCCCTGCACCAAATTCCAAATTTCTGTAGCTTTGGCCTTCATCTCCTGGTTCCTCCTG
GCCATATCTTCTTATGTCATGTTTTGGCTGTTGTGCTCAGTTTGA

Peptide Sequence

PEP ID

VIT_13s0019g02340.t01
PEP Infomation

pep chromosome:12X:13:3590205:3599573:-1 gene:VIT_13s0019g02340 transcript:VIT_13s0019g02340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:D7TLM7]
Sequence

MKVLFGSPGRLSGLVLRMGQCSFAASSIGIMLSASGYSASTAFCYLIASMGLQILWSFTL
ACVDMQALRLRRNLQHPVLLSLFVVGDWVTSLLSLAAASASAGVVLLYARDLNFCSSIIH
PPCTKFQISVALAFISWFLLAISSYVMFWLLCSV

Transcript Sequence

Transcript ID

VIT_13s0019g02340.t01
Transcript Infomation

cdna chromosome:12X:13:3590205:3599573:-1 gene:VIT_13s0019g02340 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:D7TLM7]
Sequence

AACAGTTTTTCTACTCGGCTTTTGTTTTTGTCGTTGAATGCCAACAAAGCAAGAAAACCA
TTCTCAGAGACCCCAATCTCTCCAAAAGTGGGCGATTTCTGTTTGGAATTCATGGATTTT
GTTTTTGAAATTTAGGGCTTCCAGAGGGGCCTTTCTTGTTTTGGGAAAGGGCTCTTGGAA
GAGAGAGTAGCTTTTTGGAGAAAAGAAGTTCTAGAGAGAGGATGAAAGTGTTGTTTGGGA
GCCCAGGGAGGCTGAGTGGGCTTGTTCTGAGAATGGGACAGTGTTCTTTTGCTGCTTCTT
CTATTGGGATAATGCTATCTGCTTCTGGGTATTCTGCTTCCACTGCCTTCTGCTACTTAA
TTGCCTCCATGGGCCTTCAAATCCTGTGGAGTTTCACACTTGCATGCGTTGATATGCAAG
CTTTAAGATTAAGAAGAAACCTTCAACATCCTGTCTTGCTGAGCCTATTTGTTGTTGGTG
ATTGGGTGACATCTCTGCTCTCGCTTGCAGCTGCAAGCGCGTCGGCTGGTGTGGTTCTCC
TGTATGCAAGAGACTTGAATTTCTGCAGCTCAATAATCCATCCTCCCTGCACCAAATTCC
AAATTTCTGTAGCTTTGGCCTTCATCTCCTGGTTCCTCCTGGCCATATCTTCTTATGTCA
TGTTTTGGCTGTTGTGCTCAGTTTGAATGACTCATTCTTCTCCATTACCATGTACATAGA
GTTATTTTTCGAACTTTCCATTTTCTTGGAGTTGGTTTATATTTCCCTGTTCAGGAAAAT
GTTTCTTTCCCATGTTCATAAATTTAAGTTCTATCTTATATAGAATACCATGGTTTTCTC
TTCGAA