Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g02310.t01
CDS Infomation

cds chromosome:12X:13:3574846:3578959:-1 gene:VIT_13s0019g02310 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit G [Source:UniProtKB/TrEMBL;Acc:F6HNT9]
Sequence

ATGGCGTTGGTCGACAGATCCGGGTCAGGTTGGAATTCGAATCCGCCAAAAGCGGAGAAG
ATCCGGTGGGGAGAGCTCGATGAAGACGACGGAGAAGACCTCGATTTTCTACTGCCACCC
CGCCAAGTGATTGGGCCGGAAGAGAATGGCATCAAGAAGGTGATTGAGTACAAGTTCAAT
GAAGATGGAAACAAGGTCAAGATCACCACCACCACTCGTGTTCGGAAGCTTGCCAAGGCT
CGCCTCAGTAAGCGAGCCGTGGAGCGTCGCTCATGGGCTAAGTTCGGGGACGCGGTTCAT
GAGGATGTCGGGAGTAGGCTTACCATGGTCTCCACTGAAGAGATTCTTCTTGAAAGACCT
AGAGCTCCGGGTACCAAAGCAGAAGAAACCAAGATTGCTGGAGACTCCTTGGCTCAGCTT
GGAAAGGGAGGTGCTGTTCTCATGGTGTGCAGAACTTGTGGTAAGAAAGGTGACCATTGG
ACATCTAGATGCCCATACAAGGATCTCGCAGCACAAACTGATGCCTTCGTTGACAAACCT
CCCGCTGCCGAGACCACTGTGGCTACTACAGGCACTGGCAAAGCCGCTTATGTGCCTCCA
GGCATGAGACCTGGTGCAGAGAGAGTTGGATCAGATATGAGGCGCAGGAATGAAGAGAAT
TCAGTTCGGGTCACCAACCTATCAGAGGACACAAGGGAGCCTGACTTGCATGAGCTATTC
CGCACATTTGGCCCAGTAAGTCGGGTCTACGTGGCGATTGACCAAAAGACCGGCATGAGC
AGAGGTTTTGGTTTTGTCAATTTTGTAAACAAGGAAGATGCAGAGAGGGCTATCAACAAG
CTGAATGGGTATGGTTATGACAATCTCATCCTCAGAGTGGAATGGGCCACACCCAGGACA
AACTAG

Peptide Sequence

PEP ID

VIT_13s0019g02310.t01
PEP Infomation

pep chromosome:12X:13:3574846:3578959:-1 gene:VIT_13s0019g02310 transcript:VIT_13s0019g02310.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit G [Source:UniProtKB/TrEMBL;Acc:F6HNT9]
Sequence

MALVDRSGSGWNSNPPKAEKIRWGELDEDDGEDLDFLLPPRQVIGPEENGIKKVIEYKFN
EDGNKVKITTTTRVRKLAKARLSKRAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERP
RAPGTKAEETKIAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAAQTDAFVDKP
PAAETTVATTGTGKAAYVPPGMRPGAERVGSDMRRRNEENSVRVTNLSEDTREPDLHELF
RTFGPVSRVYVAIDQKTGMSRGFGFVNFVNKEDAERAINKLNGYGYDNLILRVEWATPRT
N

Transcript Sequence

Transcript ID

VIT_13s0019g02310.t01
Transcript Infomation

cdna chromosome:12X:13:3574846:3578959:-1 gene:VIT_13s0019g02310 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit G [Source:UniProtKB/TrEMBL;Acc:F6HNT9]
Sequence

TTTCGAAACCCCTAAAACCAGTAGGGCGCAAACTCATTCATGGCGTTGGTCGACAGATCC
GGGTCAGGTTGGAATTCGAATCCGCCAAAAGCGGAGAAGATCCGGTGGGGAGAGCTCGAT
GAAGACGACGGAGAAGACCTCGATTTTCTACTGCCACCCCGCCAAGTGATTGGGCCGGAA
GAGAATGGCATCAAGAAGGTGATTGAGTACAAGTTCAATGAAGATGGAAACAAGGTCAAG
ATCACCACCACCACTCGTGTTCGGAAGCTTGCCAAGGCTCGCCTCAGTAAGCGAGCCGTG
GAGCGTCGCTCATGGGCTAAGTTCGGGGACGCGGTTCATGAGGATGTCGGGAGTAGGCTT
ACCATGGTCTCCACTGAAGAGATTCTTCTTGAAAGACCTAGAGCTCCGGGTACCAAAGCA
GAAGAAACCAAGATTGCTGGAGACTCCTTGGCTCAGCTTGGAAAGGGAGGTGCTGTTCTC
ATGGTGTGCAGAACTTGTGGTAAGAAAGGTGACCATTGGACATCTAGATGCCCATACAAG
GATCTCGCAGCACAAACTGATGCCTTCGTTGACAAACCTCCCGCTGCCGAGACCACTGTG
GCTACTACAGGCACTGGCAAAGCCGCTTATGTGCCTCCAGGCATGAGACCTGGTGCAGAG
AGAGTTGGATCAGATATGAGGCGCAGGAATGAAGAGAATTCAGTTCGGGTCACCAACCTA
TCAGAGGACACAAGGGAGCCTGACTTGCATGAGCTATTCCGCACATTTGGCCCAGTAAGT
CGGGTCTACGTGGCGATTGACCAAAAGACCGGCATGAGCAGAGGTTTTGGTTTTGTCAAT
TTTGTAAACAAGGAAGATGCAGAGAGGGCTATCAACAAGCTGAATGGGTATGGTTATGAC
AATCTCATCCTCAGAGTGGAATGGGCCACACCCAGGACAAACTAGAACATCATACTTTTC
TCCAACGTAAGTTAGGATGATCCCCA