Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g02260.t01
CDS Infomation

cds chromosome:12X:13:3523098:3534080:1 gene:VIT_13s0019g02260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTAATTCCAAGGCCGATATTGAGAGAGACTCGTGTTCGAAGTCGATCAACGAGACG
GTGAATGGCTCGCACCATTTCTTGATAAAGGGTTATTCCCTCGCAAAGGGAATGGGCGCG
GGCAAATACATCTCGAGCGACACGTTTACCGTTGGAGGATATGATTGGGCAATTTACTTC
TATCCTGATGGCAAGAACGCGGAGGATAATTCGATGTATGTGTCGGTGTTCATTGCGTTG
GCGAGCGAGGGCACTGACGTTAGGGCTTTGTTTGAATTGACGTTGTTGGATCAGAGTGGG
AAAGGCAAGCACAAAGTACACAGTCATTTTGATCGCGCATTGGAGAGTGGCCCATATACT
TTGAAATATAGAGGAAGCATGTGGGGCTACAAGCGCTTCTTCAGACGGACAACTTTAGAA
ACATCTGATTTTATCAAGGATGATTGCCTTGCTATGCATTGCACTGTTGGGGTTGTCAGA
ACTCGTGTTGAGGGGCCTAAACAGTATACCATTCCTATACCACCTTCAGACATTGGTCAG
AGTCTTAAGGACTTGCTAGAATCTGAAGTTGGTTGTGACATAACTTTTCAGGTTGCAGAT
GAGACATTCAAAGCTCATAAGTTGATACTTGCTGCTCGTTCTCCTGTATTTAGAGCTCAG
TTTTTTGGACTTGTTGGAAATCCTAATATGGATAAAGTTGTAGTGGAGGATGTTGAACCC
TCTATCTTTAAGGCGATGCTCCTGTTTATTTACTCAGACAAGCTTCCTGATGTAGACGAA
ATTACAGGCTCAGCGTCTGTGTGCACATCCACAATAATGGTTCAGCACTTACTAGCTGCT
GCTGACCGCTTTGGTTTAGATCGTCTGAAACTATTATGTGAATCAAAATTGTGTAAAGAA
GTCAGTGCTGAAACGGTGGCCACAACACTTGCCCTAGCTGAGCAGCATCGTTGTCCACAA
CTTAAAGCCATCTGTTTGAAATTTGCAGCCACTCCGTCAATCTTGGGAGCGGTAATGCAA
TCAGAAGGGTTTGGGTACTTGGAAGAGTGCTGCCCCTCATTGTTATCTGAGCTGCTTGGA
GTGATTGCATCAGTAGATGAAAACTTGACGATGCTCTCGAGTAAGAAGAGAAGTGGCAGC
AGCATATTAGGGTTAGATCTACCAGCAGATGGAGCTCCAGCAGAATCAGCCAGTGGCAGG
CGCATAAGGAGGCGGTTTTAG

Peptide Sequence

PEP ID

VIT_13s0019g02260.t01
PEP Infomation

pep chromosome:12X:13:3523098:3534080:1 gene:VIT_13s0019g02260 transcript:VIT_13s0019g02260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVNSKADIERDSCSKSINETVNGSHHFLIKGYSLAKGMGAGKYISSDTFTVGGYDWAIYF
YPDGKNAEDNSMYVSVFIALASEGTDVRALFELTLLDQSGKGKHKVHSHFDRALESGPYT
LKYRGSMWGYKRFFRRTTLETSDFIKDDCLAMHCTVGVVRTRVEGPKQYTIPIPPSDIGQ
SLKDLLESEVGCDITFQVADETFKAHKLILAARSPVFRAQFFGLVGNPNMDKVVVEDVEP
SIFKAMLLFIYSDKLPDVDEITGSASVCTSTIMVQHLLAAADRFGLDRLKLLCESKLCKE
VSAETVATTLALAEQHRCPQLKAICLKFAATPSILGAVMQSEGFGYLEECCPSLLSELLG
VIASVDENLTMLSSKKRSGSSILGLDLPADGAPAESASGRRIRRRF

Transcript Sequence

Transcript ID

VIT_13s0019g02260.t01
Transcript Infomation

cdna chromosome:12X:13:3523098:3534080:1 gene:VIT_13s0019g02260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTAGCAGCATAACCAACGCACCCAGACCCAATCACCGTCCATTCATTGTCACGCTCGTCG
ATAGGCGTCTTTCTCCCTTTCTCTATCTGTGCCCTATCTCAGACAGTTTCTTCTACGTTT
CCGACTCCGATATCACCTCCGATCAGATTCTCCGGCCGTTGATTGCCTACAGGCATCCCA
ATCGTGCACTTCTTACTTTTTATTAGGGTTAGGTCACGATTGCATCGTAACTCGGCCAAT
TCATTTGTATCTACTCATAAATGCCTGATTTCCCCAACCCAAAAGCTTAATTTTCAGTCA
ACATTCAAGATTTGGTGGGGACTCGCAGTCTAGGGCTTAAATTCAATCGAAGCAGTGCAA
GAATTTAGAAAAAAAAGAAGGCATATCCATGAGATCATGGTTAATTCCAAGGCCGATATT
GAGAGAGACTCGTGTTCGAAGTCGATCAACGAGACGGTGAATGGCTCGCACCATTTCTTG
ATAAAGGGTTATTCCCTCGCAAAGGGAATGGGCGCGGGCAAATACATCTCGAGCGACACG
TTTACCGTTGGAGGATATGATTGGGCAATTTACTTCTATCCTGATGGCAAGAACGCGGAG
GATAATTCGATGTATGTGTCGGTGTTCATTGCGTTGGCGAGCGAGGGCACTGACGTTAGG
GCTTTGTTTGAATTGACGTTGTTGGATCAGAGTGGGAAAGGCAAGCACAAAGTACACAGT
CATTTTGATCGCGCATTGGAGAGTGGCCCATATACTTTGAAATATAGAGGAAGCATGTGG
GGCTACAAGCGCTTCTTCAGACGGACAACTTTAGAAACATCTGATTTTATCAAGGATGAT
TGCCTTGCTATGCATTGCACTGTTGGGGTTGTCAGAACTCGTGTTGAGGGGCCTAAACAG
TATACCATTCCTATACCACCTTCAGACATTGGTCAGAGTCTTAAGGACTTGCTAGAATCT
GAAGTTGGTTGTGACATAACTTTTCAGGTTGCAGATGAGACATTCAAAGCTCATAAGTTG
ATACTTGCTGCTCGTTCTCCTGTATTTAGAGCTCAGTTTTTTGGACTTGTTGGAAATCCT
AATATGGATAAAGTTGTAGTGGAGGATGTTGAACCCTCTATCTTTAAGGCGATGCTCCTG
TTTATTTACTCAGACAAGCTTCCTGATGTAGACGAAATTACAGGCTCAGCGTCTGTGTGC
ACATCCACAATAATGGTTCAGCACTTACTAGCTGCTGCTGACCGCTTTGGTTTAGATCGT
CTGAAACTATTATGTGAATCAAAATTGTGTAAAGAAGTCAGTGCTGAAACGGTGGCCACA
ACACTTGCCCTAGCTGAGCAGCATCGTTGTCCACAACTTAAAGCCATCTGTTTGAAATTT
GCAGCCACTCCGTCAATCTTGGGAGCGGTAATGCAATCAGAAGGGTTTGGGTACTTGGAA
GAGTGCTGCCCCTCATTGTTATCTGAGCTGCTTGGAGTGATTGCATCAGTAGATGAAAAC
TTGACGATGCTCTCGAGTAAGAAGAGAAGTGGCAGCAGCATATTAGGGTTAGATCTACCA
GCAGATGGAGCTCCAGCAGAATCAGCCAGTGGCAGGCGCATAAGGAGGCGGTTTTAGTTT
TATGTAGCGCTGTGTTTCCTACCAAAAGGGAAAAATAGAAAAGAAGAAAATCCTTAGTTG
AATTTTATGTTAATAGTACTGAGTGATGCCGTTGCGTTTGTATTTTGCTTGTTCCACTAT
AATGTTGTTTGCCTTGGTCTTCATGAGGGTGAAATTTCCATTTTGGGGCTATCACGTTAT
CCTGTTCATCGGATGTCTTAGGACATGTTTGTGTGTGATCGATTATCAAACGGTGCAAAT
GCTGTTTGACCTGA