Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g01790.t01
CDS Infomation

cds chromosome:12X:13:3178344:3180505:1 gene:VIT_13s0019g01790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCGACCCTCGAGGGGAATCGAATTCAGTGAAGACTCAGTTCCATTGTTATCGGGT
GAGAATCTTCCCGGTGGGTTGAAATTTCAGGAGCCGTTTTTATATCAAAATAATATAGAT
ACCGTACCAATTTCTCTGCACCCGAGTGGTAGTAATTTAGCCTCGTGGCCGTGTGCGGGT
GTGGAGGAAGATCCTCTTGCGGACTCTGACTTTAGTGATATAGCTCTCAAGTACCTAAGC
CAGATACTAATGGAGGAAGACCTAGAAGAAAAGACTGGCATGTTTAAGGAGTCTTTGGCG
CTTGAGGCCACTGAGAAATTGTTCCATGACATCATTGGGGAGATATATCCTCCTCCAGGC
GAGGAAAATTGTGGCAACCCATCTGAAAATGATAGTATAGATTTTAGTACTTGTAATAGT
AATGATACTAGAGATGGTAACTTAGTGGAACCAGGGAGGAATTATGATAAGTCTCCACAT
ATTGCTTCCCAGTCAACTTCTCATTCTTTAAGTTCTTCAAGCAGCCCAAATATTGTCTTA
GATGGTTTTGTCGATGTTCCAATGAGTACCCTTAAGGTTCCCAATATATTTAATGACAGA
GAATCTGTTTTGCAGTTCAGGAGGGGGTTTGAGGAAGCTAGTAAATTCCTTCCAAATCGT
TCTGATTTGTCAGTTGATTCGGCAAACCATAATACAGAACTGTTAGTCCCTAATAATGTA
ATGAATAAAGTGGAGAAGAAGCATGGAGGGGAGCATTTTACAGATGGGTCAAGGGGAAAG
AAGAAGACTCATCGAGATTTGGAATGTGAGGAAGTGAAGAGTAACAAGCAGAGTGCTGTT
TATAATGAAATGACACTGACATCAGAAATGTTTGATCGAGTATTACTCTGTGATGCAGAT
GCATATGAAGCTGCCCTTCGTGAATCCTTTCAAAATGAAACAAGCAAGACTCTGCAGCAG
GATGGTCAATCAAAAGGATCTAATGCTGGAAAGCCCCGAGGTTGGAAGAAGGGTGGGAAA
AAGGATTTGGTGGACTTGAGAAGTCTATTAGCTCTTTGTGCACAAGCTGTGGCGGATGAT
GATCAGGTGAGCGCAGGTAAGCAACTGCAGCAGATCAGGCAGCATGCATCTCCAATGGGT
GATGGGATGCAGAGACTGGCTCACTATTTCGCTAATGCACTTGAGGCACGCTTGGATGGC
TCTGGATCCCAGATTTGCAAAGCGGTTATTACCAAACCATCAGGTGCCCATTTCTTGAAA
GTTTACCACCTACTTCTTGCAGTGTGCCCCTTTTTAAAAGTCCTTAATTTCTTCACCAAT
AAGACAATCACAAAAGCAGCTGAGAAAGCAGAGAGGCTCCATATTATTGATTTTGGTGTT
CTCTACGGTTTCTCATGGCCTTCACTTTTACAACGTCTCTCAACTAGGCCTGGTGGGCCT
CCCAAGCTTCGGATTACCGGGATTGATTTTCCAGAACCTGGCTTCCGACCGGCACAAAGG
GTTGAAGAGACAGGGCGTTGGATAGCAAATTATGCCAAGAGTTTCAATGTCCCATTTCAG
TTCAATGCCATTGCACAAAAGTTTGAAACTGTTCAAGTTGGGGATCTCAAGATCGGTAGC
GAGGAGGTTGTTATAGTGAGGTGTCGATATCGATTTAAAAACCTCCTGGATGAAACAGTG
GTGGCAGAGAGTCCAAGAAACATAGTTCTGAATCTGATCAGGAAGATGAACCCAGATATT
TTCATACACGCCGTCGTGAATGCGGCCTGCGATGCCCCCTTTTTCATGACACGATTCCGA
GAGGCTCTCTTCCACTATTCTGCTTTGTTCGACATGCTTGAGAATAATGTGCCCCGCAAC
ATTTTGGAGAGGGTGGTGATCGAGAGAGAAGTATTTGGCCGAGAGATAATGAACATGATT
GCGTGTGAGGGACCAGAGAGGATCGAGAGGCCAGAGACGTACAAGCAATGGCAGATCCGT
AATGAGAGGGCTGGATTTAGGCAGCTCCCTTTGGACCAGGAGATTGTTAATATAGCAAAG
GAGAGAGTGAAATCATGCTACCACAAAGATTTTATGATTGATGAAGACGGCCAATGGTTG
CGACAGGGGTGGAAGGGACGGATTATTTTTGCTATCACTTCTTGGAAACCTGCTTCCTAA

Peptide Sequence

PEP ID

VIT_13s0019g01790.t01
PEP Infomation

pep chromosome:12X:13:3178344:3180505:1 gene:VIT_13s0019g01790 transcript:VIT_13s0019g01790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDRPSRGIEFSEDSVPLLSGENLPGGLKFQEPFLYQNNIDTVPISLHPSGSNLASWPCAG
VEEDPLADSDFSDIALKYLSQILMEEDLEEKTGMFKESLALEATEKLFHDIIGEIYPPPG
EENCGNPSENDSIDFSTCNSNDTRDGNLVEPGRNYDKSPHIASQSTSHSLSSSSSPNIVL
DGFVDVPMSTLKVPNIFNDRESVLQFRRGFEEASKFLPNRSDLSVDSANHNTELLVPNNV
MNKVEKKHGGEHFTDGSRGKKKTHRDLECEEVKSNKQSAVYNEMTLTSEMFDRVLLCDAD
AYEAALRESFQNETSKTLQQDGQSKGSNAGKPRGWKKGGKKDLVDLRSLLALCAQAVADD
DQVSAGKQLQQIRQHASPMGDGMQRLAHYFANALEARLDGSGSQICKAVITKPSGAHFLK
VYHLLLAVCPFLKVLNFFTNKTITKAAEKAERLHIIDFGVLYGFSWPSLLQRLSTRPGGP
PKLRITGIDFPEPGFRPAQRVEETGRWIANYAKSFNVPFQFNAIAQKFETVQVGDLKIGS
EEVVIVRCRYRFKNLLDETVVAESPRNIVLNLIRKMNPDIFIHAVVNAACDAPFFMTRFR
EALFHYSALFDMLENNVPRNILERVVIEREVFGREIMNMIACEGPERIERPETYKQWQIR
NERAGFRQLPLDQEIVNIAKERVKSCYHKDFMIDEDGQWLRQGWKGRIIFAITSWKPAS

Transcript Sequence

Transcript ID

VIT_13s0019g01790.t01
Transcript Infomation

cdna chromosome:12X:13:3178344:3180505:1 gene:VIT_13s0019g01790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCGACCCTCGAGGGGAATCGAATTCAGTGAAGACTCAGTTCCATTGTTATCGGGT
GAGAATCTTCCCGGTGGGTTGAAATTTCAGGAGCCGTTTTTATATCAAAATAATATAGAT
ACCGTACCAATTTCTCTGCACCCGAGTGGTAGTAATTTAGCCTCGTGGCCGTGTGCGGGT
GTGGAGGAAGATCCTCTTGCGGACTCTGACTTTAGTGATATAGCTCTCAAGTACCTAAGC
CAGATACTAATGGAGGAAGACCTAGAAGAAAAGACTGGCATGTTTAAGGAGTCTTTGGCG
CTTGAGGCCACTGAGAAATTGTTCCATGACATCATTGGGGAGATATATCCTCCTCCAGGC
GAGGAAAATTGTGGCAACCCATCTGAAAATGATAGTATAGATTTTAGTACTTGTAATAGT
AATGATACTAGAGATGGTAACTTAGTGGAACCAGGGAGGAATTATGATAAGTCTCCACAT
ATTGCTTCCCAGTCAACTTCTCATTCTTTAAGTTCTTCAAGCAGCCCAAATATTGTCTTA
GATGGTTTTGTCGATGTTCCAATGAGTACCCTTAAGGTTCCCAATATATTTAATGACAGA
GAATCTGTTTTGCAGTTCAGGAGGGGGTTTGAGGAAGCTAGTAAATTCCTTCCAAATCGT
TCTGATTTGTCAGTTGATTCGGCAAACCATAATACAGAACTGTTAGTCCCTAATAATGTA
ATGAATAAAGTGGAGAAGAAGCATGGAGGGGAGCATTTTACAGATGGGTCAAGGGGAAAG
AAGAAGACTCATCGAGATTTGGAATGTGAGGAAGTGAAGAGTAACAAGCAGAGTGCTGTT
TATAATGAAATGACACTGACATCAGAAATGTTTGATCGAGTATTACTCTGTGATGCAGAT
GCATATGAAGCTGCCCTTCGTGAATCCTTTCAAAATGAAACAAGCAAGACTCTGCAGCAG
GATGGTCAATCAAAAGGATCTAATGCTGGAAAGCCCCGAGGTTGGAAGAAGGGTGGGAAA
AAGGATTTGGTGGACTTGAGAAGTCTATTAGCTCTTTGTGCACAAGCTGTGGCGGATGAT
GATCAGGTGAGCGCAGGTAAGCAACTGCAGCAGATCAGGCAGCATGCATCTCCAATGGGT
GATGGGATGCAGAGACTGGCTCACTATTTCGCTAATGCACTTGAGGCACGCTTGGATGGC
TCTGGATCCCAGATTTGCAAAGCGGTTATTACCAAACCATCAGGTGCCCATTTCTTGAAA
GTTTACCACCTACTTCTTGCAGTGTGCCCCTTTTTAAAAGTCCTTAATTTCTTCACCAAT
AAGACAATCACAAAAGCAGCTGAGAAAGCAGAGAGGCTCCATATTATTGATTTTGGTGTT
CTCTACGGTTTCTCATGGCCTTCACTTTTACAACGTCTCTCAACTAGGCCTGGTGGGCCT
CCCAAGCTTCGGATTACCGGGATTGATTTTCCAGAACCTGGCTTCCGACCGGCACAAAGG
GTTGAAGAGACAGGGCGTTGGATAGCAAATTATGCCAAGAGTTTCAATGTCCCATTTCAG
TTCAATGCCATTGCACAAAAGTTTGAAACTGTTCAAGTTGGGGATCTCAAGATCGGTAGC
GAGGAGGTTGTTATAGTGAGGTGTCGATATCGATTTAAAAACCTCCTGGATGAAACAGTG
GTGGCAGAGAGTCCAAGAAACATAGTTCTGAATCTGATCAGGAAGATGAACCCAGATATT
TTCATACACGCCGTCGTGAATGCGGCCTGCGATGCCCCCTTTTTCATGACACGATTCCGA
GAGGCTCTCTTCCACTATTCTGCTTTGTTCGACATGCTTGAGAATAATGTGCCCCGCAAC
ATTTTGGAGAGGGTGGTGATCGAGAGAGAAGTATTTGGCCGAGAGATAATGAACATGATT
GCGTGTGAGGGACCAGAGAGGATCGAGAGGCCAGAGACGTACAAGCAATGGCAGATCCGT
AATGAGAGGGCTGGATTTAGGCAGCTCCCTTTGGACCAGGAGATTGTTAATATAGCAAAG
GAGAGAGTGAAATCATGCTACCACAAAGATTTTATGATTGATGAAGACGGCCAATGGTTG
CGACAGGGGTGGAAGGGACGGATTATTTTTGCTATCACTTCTTGGAAACCTGCTTCCTAA
AT