Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g01770.t01
CDS Infomation

cds chromosome:12X:13_random:3172541:3175426:-1 gene:VIT_13s0019g01770 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCACCTCAGCCCCAACCCCCGAAACCCCATAAGTTTTACTTCTTCTACGGCCACAGA
AAACCTTCTCAGAACCGCCCCACTGTCCATGGCGGTCTCTTCTCCAACCGCACAACCCTA
AACCCTAAACCTCCAACCCTCCAAAACCCTACTACGCATTTCAATCTCCAAAATTGGGAC
CCAGACTCTCCCAAAGCGCTAGCGATCCCACCCTCCAAAACCCCATGTGAGCGGTTCTTC
GACATTGCAAAAAACTTGTCTCCTATCGCCCGGTACATCTGTGATTCGTTCCGGAAGCAC
CGGAACTGGGGCCCTCCAGTGGTAGCGGACCTCAACAAGCTCCGCCGTGTGACGCCGGTG
CTGGTGGCGGAGGTGCTCAAGGTCCAAACTGACCCTGTAATTTGCTCCAAGTTCTTCCAT
TGGGCGGGTAAGCAAAAGGGTTATAAGCATAACTTCGCTTCGTATAATGCATTTGCTTAT
TGCTTGAATCGATCGAATCAGTTTAGGGCTGCTGATCAAGTTCCTGAGTTGATGAACATG
CAGGGGAAGCCACCTAGTGAGAAGCAATTTGAAATTTTGATTAGGATGCATATTGATGCT
AATAGGGGTCTCAGGGTTTACTATGTGTATGAAAAAATGAAGAAGTTCGGGATTAAACCT
CGGGTTTTTTTGTATAATAGGATCATGGATGGGCTTGTGAAGACGGGTCATTTAGATTTA
GCAATGTCAGTTTATGAGGACTTTAAGGAAGATGGATTGGTGGAAGAGAGTGTTACTTAT
ATGATTCTGGTTAAAGGGTTATGTAAGGCAGGCCGGATTGATGAAGTGTTGGAGCTTTTG
GATCGGATGAGGGGGAATTTGTGTAAGCCCGATGTTTTTGCTTATACAGCAATGGTGAAG
GTTCTGGTTGCAGAGGGGAACCTGGATGGCTGTTTGAGGGTTTGGGAGGAAATGAGGAAG
GATAAGGTTGAGCCAGATGTTATGGCGTATACAACTTTGGTTGCAGCACTATGCAATGGG
AACCGGGTTGGGGAAGGTTTTGAGTTATTCAAGGAGATGAAACAGAAGAAGTATTTGATT
GATAGGGCTATATATGGGTCATTGATTGAGGGTTTTGTTGTGAATGAGAGGGTCGGTTCA
GCCTGTGACTTGTTGAAGGATTTGATGGATTCGGGATACAGGGCTGACTTGGCGATATAT
AATTCTCTAATAGAAGGGATGTGTAATGTGAAACAGGTTGATAAGGCTTATAAGCTTTTC
CAAGTCACAGTTCACGAGAGTCTTGAGCCGAACTTCTTAACTGTGAAACCCATGTTGGTG
TCTTATGCAGAGATGAAAAGAATGGATGACTTCTGCTCATTGCTTGGGCAGATGCAGAAA
TTGGGTTTTCCCGTCATTGACGATCTCTCAAAATTCTTCTCAGTTATGATTGAAAAAGGG
GAAAGACTAAAATTGGCTTTAGAAGTGTTTGAGCACTTGAAGGCAAAAGGTTATTGTAGT
ATTTCCATTTACAATATTCTTATGGAAGCTATCCACAGGACTGGAGAGGTGAAAAAGGCA
TTGTCTCTCTTTGATGATATAAAAGATTCAAATTTCAAGCCCGACTCATCCACCTACAGT
AATGCAATTATATGTTTTGTTGAAGTTGGGGATGTCCAGGAGGCGTGTGCTTGTTATAAT
AAAATAATAGAGATGTGTCAGCTTCCTTCTGTTGCAGCCTATCGTTCTCTTGTCAAAGGT
CTCTGCAAAAGTGAAGAGATTGATGCAGCTATTATGCTTGTTCGTGATTGCTTAGCCAAT
GTTACTAGTGGCCCCATGGAATTTAAGTACACTCTTACAATTCTCCATGCATGTAAATCA
GGTAACGCTGAGAAAGTGATCGATGTACTAAATGAGATGATGCAGGAAGGTTGTACTCCT
GATGAAGTTACATATTCTGCTCTTATATCTGGCATGTGTAAGCATGGAACACTAGAAGAG
GCTAGGAAGGTTTTTTCAAATATGAGAGAGCGCAAACTTTTAACAGAAGCTAATGTGATT
GTGTATGATGAAATCCTTATTGAACACATGAAGAAGAAGACAGCAGACTTGGTGCTGTCT
GGATTGAAGTTTTTTGGTCTGGAATCCAAGTTGAGATCGAAGGGTTCCACTTTGCTGCCC
ATTGAAAATTCAAATCCAGGCTCATCTTGA

Peptide Sequence

PEP ID

VIT_13s0019g01770.t01
PEP Infomation

pep chromosome:12X:13_random:3172541:3175426:-1 gene:VIT_13s0019g01770 transcript:VIT_13s0019g01770.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPPQPQPPKPHKFYFFYGHRKPSQNRPTVHGGLFSNRTTLNPKPPTLQNPTTHFNLQNWD
PDSPKALAIPPSKTPCERFFDIAKNLSPIARYICDSFRKHRNWGPPVVADLNKLRRVTPV
LVAEVLKVQTDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNM
QGKPPSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDL
AMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLELLDRMRGNLCKPDVFAYTAMVK
VLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKYLI
DRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKLF
QVTVHESLEPNFLTVKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDDLSKFFSVMIEKG
ERLKLALEVFEHLKAKGYCSISIYNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYS
NAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLAN
VTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEE
ARKVFSNMRERKLLTEANVIVYDEILIEHMKKKTADLVLSGLKFFGLESKLRSKGSTLLP
IENSNPGSS

Transcript Sequence

Transcript ID

VIT_13s0019g01770.t01
Transcript Infomation

cdna chromosome:12X:13_random:3172541:3175426:-1 gene:VIT_13s0019g01770 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAATGCCACCTCAGCCCCAACCCCCGAAACCCCATAAGTTTTACTTCTTCTACGGCCAC
AGAAAACCTTCTCAGAACCGCCCCACTGTCCATGGCGGTCTCTTCTCCAACCGCACAACC
CTAAACCCTAAACCTCCAACCCTCCAAAACCCTACTACGCATTTCAATCTCCAAAATTGG
GACCCAGACTCTCCCAAAGCGCTAGCGATCCCACCCTCCAAAACCCCATGTGAGCGGTTC
TTCGACATTGCAAAAAACTTGTCTCCTATCGCCCGGTACATCTGTGATTCGTTCCGGAAG
CACCGGAACTGGGGCCCTCCAGTGGTAGCGGACCTCAACAAGCTCCGCCGTGTGACGCCG
GTGCTGGTGGCGGAGGTGCTCAAGGTCCAAACTGACCCTGTAATTTGCTCCAAGTTCTTC
CATTGGGCGGGTAAGCAAAAGGGTTATAAGCATAACTTCGCTTCGTATAATGCATTTGCT
TATTGCTTGAATCGATCGAATCAGTTTAGGGCTGCTGATCAAGTTCCTGAGTTGATGAAC
ATGCAGGGGAAGCCACCTAGTGAGAAGCAATTTGAAATTTTGATTAGGATGCATATTGAT
GCTAATAGGGGTCTCAGGGTTTACTATGTGTATGAAAAAATGAAGAAGTTCGGGATTAAA
CCTCGGGTTTTTTTGTATAATAGGATCATGGATGGGCTTGTGAAGACGGGTCATTTAGAT
TTAGCAATGTCAGTTTATGAGGACTTTAAGGAAGATGGATTGGTGGAAGAGAGTGTTACT
TATATGATTCTGGTTAAAGGGTTATGTAAGGCAGGCCGGATTGATGAAGTGTTGGAGCTT
TTGGATCGGATGAGGGGGAATTTGTGTAAGCCCGATGTTTTTGCTTATACAGCAATGGTG
AAGGTTCTGGTTGCAGAGGGGAACCTGGATGGCTGTTTGAGGGTTTGGGAGGAAATGAGG
AAGGATAAGGTTGAGCCAGATGTTATGGCGTATACAACTTTGGTTGCAGCACTATGCAAT
GGGAACCGGGTTGGGGAAGGTTTTGAGTTATTCAAGGAGATGAAACAGAAGAAGTATTTG
ATTGATAGGGCTATATATGGGTCATTGATTGAGGGTTTTGTTGTGAATGAGAGGGTCGGT
TCAGCCTGTGACTTGTTGAAGGATTTGATGGATTCGGGATACAGGGCTGACTTGGCGATA
TATAATTCTCTAATAGAAGGGATGTGTAATGTGAAACAGGTTGATAAGGCTTATAAGCTT
TTCCAAGTCACAGTTCACGAGAGTCTTGAGCCGAACTTCTTAACTGTGAAACCCATGTTG
GTGTCTTATGCAGAGATGAAAAGAATGGATGACTTCTGCTCATTGCTTGGGCAGATGCAG
AAATTGGGTTTTCCCGTCATTGACGATCTCTCAAAATTCTTCTCAGTTATGATTGAAAAA
GGGGAAAGACTAAAATTGGCTTTAGAAGTGTTTGAGCACTTGAAGGCAAAAGGTTATTGT
AGTATTTCCATTTACAATATTCTTATGGAAGCTATCCACAGGACTGGAGAGGTGAAAAAG
GCATTGTCTCTCTTTGATGATATAAAAGATTCAAATTTCAAGCCCGACTCATCCACCTAC
AGTAATGCAATTATATGTTTTGTTGAAGTTGGGGATGTCCAGGAGGCGTGTGCTTGTTAT
AATAAAATAATAGAGATGTGTCAGCTTCCTTCTGTTGCAGCCTATCGTTCTCTTGTCAAA
GGTCTCTGCAAAAGTGAAGAGATTGATGCAGCTATTATGCTTGTTCGTGATTGCTTAGCC
AATGTTACTAGTGGCCCCATGGAATTTAAGTACACTCTTACAATTCTCCATGCATGTAAA
TCAGGTAACGCTGAGAAAGTGATCGATGTACTAAATGAGATGATGCAGGAAGGTTGTACT
CCTGATGAAGTTACATATTCTGCTCTTATATCTGGCATGTGTAAGCATGGAACACTAGAA
GAGGCTAGGAAGGTTTTTTCAAATATGAGAGAGCGCAAACTTTTAACAGAAGCTAATGTG
ATTGTGTATGATGAAATCCTTATTGAACACATGAAGAAGAAGACAGCAGACTTGGTGCTG
TCTGGATTGAAGTTTTTTGGTCTGGAATCCAAGTTGAGATCGAAGGGTTCCACTTTGCTG
CCCATTGAAAATTCAAATCCAGGCTCATCTTGA