Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g01720.t01
CDS Infomation

cds chromosome:12X:13_random:3161645:3169555:1 gene:VIT_13s0019g01720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGGTCTCCACGCCTCTCTCAGAGGCTCTTCATCCTCTTCGTCTCAGTCGTTCTCC
TCCAAGCTTCTGCTTCTTCTCACTCTTCTGCCTCTGACTCTCGCCGCTTTTGCTTTCGTG
CTTCAGTGGCGAGGTGGGGTCACCGATCCGGCCACGAGATGGTCGCCGGAGGCCCACAAG
TTTCCGGGCATGGACAGCTCGCCACCGACCACCATCGGCCACTCCTCGGCCTCCGATTGC
GTCCTTCTGAGCCGTGGATCGTCTCCCTCGTTCCCATACTACCGTGACTGGAAGTTCGAT
GTCGGGTCCGATCTGAGACCTAAGATATGTATTACGACTAGTACATCAGCTGGTTTAGAA
CAGATTCTACCATGGATGTTTTATCACAAGGTTATTGGGGTTTCGACCTTTTTTCTTTTT
GTGGAAGGAAAGGCTGCATCTCCTAATGTATCCAAAGTCCTGGAATCTATTCCTGGAGTA
AAAGTAATATTTAGAACAAAAGAGCTAGAGGAGCAACAGGCTAAAAGCCGTATCTGGAAT
GAGACATGGTTATCAAGTTTCTTTTACAAACCATGCAATTATGAGCTATTTGTGAAGCAG
TCTCTTAATATGGAGATGGCTATTGTCATGGCAAGGAATGCAGGCATGGACTGGATTCTT
CATCTTGACACGGATGAGTTAATGCATCCGGCTGGTGCTACTGAGTATTCTTTGAGGCAG
TTGCTGCATGATGTGCCTGGAAATGTGGATATGGTTATATTTCCTAATTATGAGAGCAGT
ATTGAACGGGATGATATCAAAGAACCTTTCAGTGAGGTGTCAATGTTCAAGAAGAACTAT
GACCATCTTCCAAAGGATACATATTTTGGCATGTACAAAGAATCAACTCGCGGTAATCCA
AACTACTTTTTGACTTATGGAAATGGCAAATCAGTTGCTCGGATTCAAGATCATCTTCGT
CCCAATGGTGCACATAGATGGCACAATTATATGAAAACCCCAAATGAAATCAAATTGGAA
GAGGCTGCTGTTCTACATTACACATACACTAAATTTTCAGACTTGACTTCTAGACGTGAT
CGTTGTGGCTGCAAGCCTACAAAGGAGGATGTCAAAAGATGCTTCATGTTGGAGTTTGAC
AGAGCCGCATTCATAATTGCTTCAACTGCAACTGAGGAGGAAATGCTAAACTGGTATCGT
GAGCACATCGTCTGGACTGACAAAGCACTAAACATGAAACTTTTGAGGAAGGGGATTCTA
ACTCGCATATATGCTCCCATGGCCATCATTCAAGGTTTGAGGGAGTCTGGTGTTTTCAGC
TCTGTTATTGCATCTGCCCCAACAACTCTGTCAAAGGACAAGTTCTTATCTACCATTGGA
AGTACCAACTCATCTAGAGCTGTTGCCTCTGAATCCCTCCCATCCCGAAAGTTTGGTAGA
AGCAAAGAATCTCAGGCAACAGCCCGGAAGGCATTGGAAATCGCAGATGCTGCATCTCAT
AAAGCTGCAGTTCCACCATTGTCGCCCCCAGGCATGGATGATGAGCACCTCGTGAGCGAA
GCATGA

Peptide Sequence

PEP ID

VIT_13s0019g01720.t01
PEP Infomation

pep chromosome:12X:13_random:3161645:3169555:1 gene:VIT_13s0019g01720 transcript:VIT_13s0019g01720.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGLHASLRGSSSSSSQSFSSKLLLLLTLLPLTLAAFAFVLQWRGGVTDPATRWSPEAHK
FPGMDSSPPTTIGHSSASDCVLLSRGSSPSFPYYRDWKFDVGSDLRPKICITTSTSAGLE
QILPWMFYHKVIGVSTFFLFVEGKAASPNVSKVLESIPGVKVIFRTKELEEQQAKSRIWN
ETWLSSFFYKPCNYELFVKQSLNMEMAIVMARNAGMDWILHLDTDELMHPAGATEYSLRQ
LLHDVPGNVDMVIFPNYESSIERDDIKEPFSEVSMFKKNYDHLPKDTYFGMYKESTRGNP
NYFLTYGNGKSVARIQDHLRPNGAHRWHNYMKTPNEIKLEEAAVLHYTYTKFSDLTSRRD
RCGCKPTKEDVKRCFMLEFDRAAFIIASTATEEEMLNWYREHIVWTDKALNMKLLRKGIL
TRIYAPMAIIQGLRESGVFSSVIASAPTTLSKDKFLSTIGSTNSSRAVASESLPSRKFGR
SKESQATARKALEIADAASHKAAVPPLSPPGMDDEHLVSEA

Transcript Sequence

Transcript ID

VIT_13s0019g01720.t01
Transcript Infomation

cdna chromosome:12X:13_random:3161645:3169555:1 gene:VIT_13s0019g01720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGTTTCTCCGTTTCCGTAAGGCTCGCAATGGCTGGTCTCCACGCCTCTCTCAGAGGCTCT
TCATCCTCTTCGTCTCAGTCGTTCTCCTCCAAGCTTCTGCTTCTTCTCACTCTTCTGCCT
CTGACTCTCGCCGCTTTTGCTTTCGTGCTTCAGTGGCGAGGTGGGGTCACCGATCCGGCC
ACGAGATGGTCGCCGGAGGCCCACAAGTTTCCGGGCATGGACAGCTCGCCACCGACCACC
ATCGGCCACTCCTCGGCCTCCGATTGCGTCCTTCTGAGCCGTGGATCGTCTCCCTCGTTC
CCATACTACCGTGACTGGAAGTTCGATGTCGGGTCCGATCTGAGACCTAAGATATGTATT
ACGACTAGTACATCAGCTGGTTTAGAACAGATTCTACCATGGATGTTTTATCACAAGGTT
ATTGGGGTTTCGACCTTTTTTCTTTTTGTGGAAGGAAAGGCTGCATCTCCTAATGTATCC
AAAGTCCTGGAATCTATTCCTGGAGTAAAAGTAATATTTAGAACAAAAGAGCTAGAGGAG
CAACAGGCTAAAAGCCGTATCTGGAATGAGACATGGTTATCAAGTTTCTTTTACAAACCA
TGCAATTATGAGCTATTTGTGAAGCAGTCTCTTAATATGGAGATGGCTATTGTCATGGCA
AGGAATGCAGGCATGGACTGGATTCTTCATCTTGACACGGATGAGTTAATGCATCCGGCT
GGTGCTACTGAGTATTCTTTGAGGCAGTTGCTGCATGATGTGCCTGGAAATGTGGATATG
GTTATATTTCCTAATTATGAGAGCAGTATTGAACGGGATGATATCAAAGAACCTTTCAGT
GAGGTGTCAATGTTCAAGAAGAACTATGACCATCTTCCAAAGGATACATATTTTGGCATG
TACAAAGAATCAACTCGCGGTAATCCAAACTACTTTTTGACTTATGGAAATGGCAAATCA
GTTGCTCGGATTCAAGATCATCTTCGTCCCAATGGTGCACATAGATGGCACAATTATATG
AAAACCCCAAATGAAATCAAATTGGAAGAGGCTGCTGTTCTACATTACACATACACTAAA
TTTTCAGACTTGACTTCTAGACGTGATCGTTGTGGCTGCAAGCCTACAAAGGAGGATGTC
AAAAGATGCTTCATGTTGGAGTTTGACAGAGCCGCATTCATAATTGCTTCAACTGCAACT
GAGGAGGAAATGCTAAACTGGTATCGTGAGCACATCGTCTGGACTGACAAAGCACTAAAC
ATGAAACTTTTGAGGAAGGGGATTCTAACTCGCATATATGCTCCCATGGCCATCATTCAA
GGTTTGAGGGAGTCTGGTGTTTTCAGCTCTGTTATTGCATCTGCCCCAACAACTCTGTCA
AAGGACAAGTTCTTATCTACCATTGGAAGTACCAACTCATCTAGAGCTGTTGCCTCTGAA
TCCCTCCCATCCCGAAAGTTTGGTAGAAGCAAAGAATCTCAGGCAACAGCCCGGAAGGCA
TTGGAAATCGCAGATGCTGCATCTCATAAAGCTGCAGTTCCACCATTGTCGCCCCCAGGC
ATGGATGATGAGCACCTCGTGAGCGAAGCATGATGGATTTCCTGGCATGAATGCTTCTTA
TTCTTCTCCTTTCTGCTTGGATGTTGATTCCAAGAGATTTTTGATTTTCTTATTTACTAT
TGAGGCTAAGAATCAGGAGAGAAGCAAGAGGTCGTTGGGATTCATTCATGTTTGGTTTCA
TGGGGTTTCAAGGTTTCCCGATCACTACCCAAGCGCTGATGTAAATTTTTTAGAGAGAAA
AAGAGAGAGAGTTTTGGTACACAGACCCTTTCTAGGCTGGTAACTGAAAATCTTGGTCTC
TGATTGTTGTGTATAGAAATCAAGGAGGTATTGAGTCTGTTGACAGTGACAGAGGATCAT
CTTTATTTCTTAATTCAATACAACTTCTATTGACATTCTGG