Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g01220.t01
CDS Infomation

cds chromosome:12X:13_random:2870430:2873060:-1 gene:VIT_13s0019g01220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGGAATGATTCAAGAGGACGGATCTTCATCTGTAACTTCGTCGCCCCTTCAAATC
TTTTCCCTCATGTCACTTTCTCCGGGTTTGGGCTCACCATATCCCTGGCTTAAGGAGCTG
AAATCCGAGGAGCGGGGTTTGTATCTTATCCGTCTTCTCGTGGCCTGTGCTAACCATGTT
GCCGCTGGCAGCATTGAGAACGCAAATATTGGCCTTGAGCATATTTCCCATCTAGCTTCT
CCTGATGGAGATACAGTCCAGCGAATAGCTGCTTATTTCACTGAAGCACTTGCTGATCGA
ATGCTGAAAGGTTGGCCTGGTTTGCACAAGGCCCTCAATTCGACAAAGATATCTTCTATA
TCTGAAGAGATTCTTGTCCAGAAATTGTTCTTTGAGCTCTGCCCCTTCCTGAAGCTCTCA
TATGTTATTACCAACCAGGCTATTATTGAAGCCATGGAAGGGGAGAAGATGGTTCATATT
ATTGACCTCAATTCATTTGAATCTGCCCAGTGGATTAATCTTCTTCAGTCATTAAGTGCA
CGGCCAGAAGGTCCACCCCATCTGAGAATTACAGGTATTCATGAACAGAAAGAGGTGTTG
GATCTAATGGCTCTTCAGCTGACAAAAGAAGCCGAAAAATTGGATATCCCATTTCAATTT
AATCCTATAGTTAGCAAATTAGAGAATCTTGATTTTGAAAGTCTGCGTGTTAAGACAGGA
GAAGCACTTGCAATCAGCTCCGTACTACAACTTCATACTCTCTTGGCAATTGATGATGAG
ATGGTTGGAAAATCCCCTTCAGCATCCAAGAACACTAGTGCAGTTCACTTGCAGAGAGTT
TTGCAGATGAACCAACGCACATTAGGAGAGTGGCTCGAAAAAGATTTGCCCAATGTTTAC
ATTCCAAGTCCTGAATCTGCATCGGCATCAACAACATCCCCACTATCTTTGGCCAGTTCA
CCAAAGATGGGGAGCTTTCTTGCTGCTCTTTGGGGCCTCTCACCAAAGCTGATGGTGGTA
ACAGAGCAAGAATCAAACAATAATTGTCCTACTCTGATGGAAAGAGTCATGGAAGCATTA
AATTTTTATGCAGCACTATTTGATTGCTTGGAATCTACCTTATCAAGGGCTTCCATTGAG
CGACAGAAAGTGGAGAAGATGCTTTTTGGAGAGGAAATTAAGAATATCATAGCATGTGAG
GGACCCGAAAGGAAAGAGAGGCATGAAAAGCTTGAGAAATGGGTTATGAGGCTTGAGCTG
GCTGGGTTTGGGAGGGTGCCTCTGAGCTACCAAGGAATGTTGCAGGCATCGAGGTTGCTG
GTGAGTTATGGTTATGATGGGTATAGGATGAAAGAAGAGAATGGGTGTTTGGTCATTTGC
TGGCAAGACCGGCCCCTTTTCTCTGTCTCTGCTTGGAGGTTTAAGAGGTATGATTAA

Peptide Sequence

PEP ID

VIT_13s0019g01220.t01
PEP Infomation

pep chromosome:12X:13_random:2870430:2873060:-1 gene:VIT_13s0019g01220 transcript:VIT_13s0019g01220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGMIQEDGSSSVTSSPLQIFSLMSLSPGLGSPYPWLKELKSEERGLYLIRLLVACANHV
AAGSIENANIGLEHISHLASPDGDTVQRIAAYFTEALADRMLKGWPGLHKALNSTKISSI
SEEILVQKLFFELCPFLKLSYVITNQAIIEAMEGEKMVHIIDLNSFESAQWINLLQSLSA
RPEGPPHLRITGIHEQKEVLDLMALQLTKEAEKLDIPFQFNPIVSKLENLDFESLRVKTG
EALAISSVLQLHTLLAIDDEMVGKSPSASKNTSAVHLQRVLQMNQRTLGEWLEKDLPNVY
IPSPESASASTTSPLSLASSPKMGSFLAALWGLSPKLMVVTEQESNNNCPTLMERVMEAL
NFYAALFDCLESTLSRASIERQKVEKMLFGEEIKNIIACEGPERKERHEKLEKWVMRLEL
AGFGRVPLSYQGMLQASRLLVSYGYDGYRMKEENGCLVICWQDRPLFSVSAWRFKRYD

Transcript Sequence

Transcript ID

VIT_13s0019g01220.t01
Transcript Infomation

cdna chromosome:12X:13_random:2870430:2873060:-1 gene:VIT_13s0019g01220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGACAAAAACAACTTCTTACATTGTCGCCAACGCAGCCATGGAAAAGTCCTTCAAG
ATAAGGGCTTTCATTTCAATTGACACGCACTCCAGCAACAAAACCCTAGAACTCAACACT
AAATACCTCTGAAGACACTTTGGTGGGTGAAGGGATTGGAGCAGCAATTTAGGCAATTTT
CATAGGGTATTTTTCTGGGTTTTTTGTTAATTGGAAAACCCAGTTGAGAATTTGAATTTG
CTCGTCTTTTATGAGTTGTTCAGGGAAACACTGCTGAAGTTGCTCTCTCTGAGTCCAACC
AACTTGTTAATGGCAGGAATGATTCAAGAGGACGGATCTTCATCTGTAACTTCGTCGCCC
CTTCAAATCTTTTCCCTCATGTCACTTTCTCCGGGTTTGGGCTCACCATATCCCTGGCTT
AAGGAGCTGAAATCCGAGGAGCGGGGTTTGTATCTTATCCGTCTTCTCGTGGCCTGTGCT
AACCATGTTGCCGCTGGCAGCATTGAGAACGCAAATATTGGCCTTGAGCATATTTCCCAT
CTAGCTTCTCCTGATGGAGATACAGTCCAGCGAATAGCTGCTTATTTCACTGAAGCACTT
GCTGATCGAATGCTGAAAGGTTGGCCTGGTTTGCACAAGGCCCTCAATTCGACAAAGATA
TCTTCTATATCTGAAGAGATTCTTGTCCAGAAATTGTTCTTTGAGCTCTGCCCCTTCCTG
AAGCTCTCATATGTTATTACCAACCAGGCTATTATTGAAGCCATGGAAGGGGAGAAGATG
GTTCATATTATTGACCTCAATTCATTTGAATCTGCCCAGTGGATTAATCTTCTTCAGTCA
TTAAGTGCACGGCCAGAAGGTCCACCCCATCTGAGAATTACAGGTATTCATGAACAGAAA
GAGGTGTTGGATCTAATGGCTCTTCAGCTGACAAAAGAAGCCGAAAAATTGGATATCCCA
TTTCAATTTAATCCTATAGTTAGCAAATTAGAGAATCTTGATTTTGAAAGTCTGCGTGTT
AAGACAGGAGAAGCACTTGCAATCAGCTCCGTACTACAACTTCATACTCTCTTGGCAATT
GATGATGAGATGGTTGGAAAATCCCCTTCAGCATCCAAGAACACTAGTGCAGTTCACTTG
CAGAGAGTTTTGCAGATGAACCAACGCACATTAGGAGAGTGGCTCGAAAAAGATTTGCCC
AATGTTTACATTCCAAGTCCTGAATCTGCATCGGCATCAACAACATCCCCACTATCTTTG
GCCAGTTCACCAAAGATGGGGAGCTTTCTTGCTGCTCTTTGGGGCCTCTCACCAAAGCTG
ATGGTGGTAACAGAGCAAGAATCAAACAATAATTGTCCTACTCTGATGGAAAGAGTCATG
GAAGCATTAAATTTTTATGCAGCACTATTTGATTGCTTGGAATCTACCTTATCAAGGGCT
TCCATTGAGCGACAGAAAGTGGAGAAGATGCTTTTTGGAGAGGAAATTAAGAATATCATA
GCATGTGAGGGACCCGAAAGGAAAGAGAGGCATGAAAAGCTTGAGAAATGGGTTATGAGG
CTTGAGCTGGCTGGGTTTGGGAGGGTGCCTCTGAGCTACCAAGGAATGTTGCAGGCATCG
AGGTTGCTGGTGAGTTATGGTTATGATGGGTATAGGATGAAAGAAGAGAATGGGTGTTTG
GTCATTTGCTGGCAAGACCGGCCCCTTTTCTCTGTCTCTGCTTGGAGGTTTAAGAGGTAT
GATTAAAACATTTGACAACACGGAGACTTAGTTTTCCATTTTGTCTT