Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g01160.t01
CDS Infomation

cds chromosome:12X:13_random:2838949:2844200:1 gene:VIT_13s0019g01160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGAGAAGAGAGATGAGGAAAGAGTGTGTGTTACAGGCGCCGGAGGGTATGTGGCC
TCATGGGTTGTCAAGCTTCTTCTCTCTAAGGGTTTTATCGTTCATGGAACCGTCAGAGAC
CCATGTGATGAGAAGAACAGTCATATGAAGAAGTTGGAGAAGGCTTCAGAGAATTTGAAG
CTGTTCAAGGCAGACTTGTTGGAGCTTGAAAGCCTCTGTGCAGCCATTGATGGTTGCACT
GGGGTTTTCCATGTTGCCAGCCCTGTTCCTTCAGCCAAGGTAGCCAATCCAGAGGTTGAA
CTGCTGGAACCAGCCGTCACGGGTACACGAAATGTACTGAAGGCATGTGAGAAGGCCAAA
GTGAAGAAAGTCGTTGTAGTATCATCAGTTGCTGCAGTCAACCGTAACCCAAATTGGCCC
ATGGATCGCCCCAAAGACGAGGAATGTTGGTCCGATCCTGAATTTTGTAGGACAAATCAG
GACTTTTACAGCCTTGCCAAAACACTAGCAGAGAGTGAAGCTTTGGAGCATGCAAAGAAA
AGTGACCTTAATATTGTAACAATTTGTCCATCCATGGTTATTGGACCCATGCTGCAATCC
ACATTGAATGCTAGTAGCCTCCTTCTCCTCAAATATTTGAAAGATGCAAATGGATCAGTA
GAAAATAAAGAGCGTCCAATCATTGATGTGCATGATTTAGCTGATGCAATTTTTTTGATA
TATGACAAACCCGAGGCAGAAGGAAGATACATATGTTCATCATATACGATCCTAGTACAA
AAATTGATAGAGAAATTGAAGAACATATATCCCAACTACAATTATCCTAAGAGTTATACT
GAAGTAGAGGAAGCGTTTAAGCTGAGTTCAAAGAAATTGGAGAGTTTGGGATGGAAGTAT
AGGTCATTGGAAGAGACTCTAATGGATGCTGTTAAAGACTTTGAAGAGAATGGCTTATTG
GATAAACACTAG

Peptide Sequence

PEP ID

VIT_13s0019g01160.t01
PEP Infomation

pep chromosome:12X:13_random:2838949:2844200:1 gene:VIT_13s0019g01160 transcript:VIT_13s0019g01160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEKRDEERVCVTGAGGYVASWVVKLLLSKGFIVHGTVRDPCDEKNSHMKKLEKASENLK
LFKADLLELESLCAAIDGCTGVFHVASPVPSAKVANPEVELLEPAVTGTRNVLKACEKAK
VKKVVVVSSVAAVNRNPNWPMDRPKDEECWSDPEFCRTNQDFYSLAKTLAESEALEHAKK
SDLNIVTICPSMVIGPMLQSTLNASSLLLLKYLKDANGSVENKERPIIDVHDLADAIFLI
YDKPEAEGRYICSSYTILVQKLIEKLKNIYPNYNYPKSYTEVEEAFKLSSKKLESLGWKY
RSLEETLMDAVKDFEENGLLDKH

Transcript Sequence

Transcript ID

VIT_13s0019g01160.t01
Transcript Infomation

cdna chromosome:12X:13_random:2838949:2844200:1 gene:VIT_13s0019g01160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGTGAGAGAAAAATAAGGGATAATGGCAGAGAAGAGAGATGAGGAAAGAGTGTGTGTTAC
AGGCGCCGGAGGGTATGTGGCCTCATGGGTTGTCAAGCTTCTTCTCTCTAAGGGTTTTAT
CGTTCATGGAACCGTCAGAGACCCATGTGATGAGAAGAACAGTCATATGAAGAAGTTGGA
GAAGGCTTCAGAGAATTTGAAGCTGTTCAAGGCAGACTTGTTGGAGCTTGAAAGCCTCTG
TGCAGCCATTGATGGTTGCACTGGGGTTTTCCATGTTGCCAGCCCTGTTCCTTCAGCCAA
GGTAGCCAATCCAGAGGTTGAACTGCTGGAACCAGCCGTCACGGGTACACGAAATGTACT
GAAGGCATGTGAGAAGGCCAAAGTGAAGAAAGTCGTTGTAGTATCATCAGTTGCTGCAGT
CAACCGTAACCCAAATTGGCCCATGGATCGCCCCAAAGACGAGGAATGTTGGTCCGATCC
TGAATTTTGTAGGACAAATCAGGACTTTTACAGCCTTGCCAAAACACTAGCAGAGAGTGA
AGCTTTGGAGCATGCAAAGAAAAGTGACCTTAATATTGTAACAATTTGTCCATCCATGGT
TATTGGACCCATGCTGCAATCCACATTGAATGCTAGTAGCCTCCTTCTCCTCAAATATTT
GAAAGATGCAAATGGATCAGTAGAAAATAAAGAGCGTCCAATCATTGATGTGCATGATTT
AGCTGATGCAATTTTTTTGATATATGACAAACCCGAGGCAGAAGGAAGATACATATGTTC
ATCATATACGATCCTAGTACAAAAATTGATAGAGAAATTGAAGAACATATATCCCAACTA
CAATTATCCTAAGAGTTATACTGAAGTAGAGGAAGCGTTTAAGCTGAGTTCAAAGAAATT
GGAGAGTTTGGGATGGAAGTATAGGTCATTGGAAGAGACTCTAATGGATGCTGTTAAAGA
CTTTGAAGAGAATGGCTTATTGGATAAACACTAGC