Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0019g00930.t01
CDS Infomation

cds chromosome:12X:13:2720364:2723716:1 gene:VIT_13s0019g00930 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGGAAATGGAGGGGCTCCGGTGATCGGAATCGATCTCGGCACGACGTTCTCGTGC
GTCGGAGTGTGGCAGTACGATCATGTTGAAATCATTGCGAATGACCAGGGCAACAGAACG
ACGCCATCTTACGTTGCTTTCACTAATACGGAGCGGTTGATAGGAGATGCTGCAAAGAAC
CAGGTCGCTATGAACCCTGTCAACACTGTGTTTGCTTATTCTGTTGCTTTGAGGTTTGGG
GTTTCCATGTTCATCACAGATGCAAAGCGTCTGATTGGTCGGAGGTTCAGTGATGCCTCA
ATTCAGGATGATATAAAACTCTGGCCGTTCAAGGTCATTGGTGGTATTGGTGACAAACCC
ACAATTGTGGTCACTTACAAAGAAGAAGAGAAAAAGTTTACCGCTCAAGAGATTTCATCT
ATGGTCCTCTCAAAGATGCGTGAGATTGCTGAAGTCTACCTTGGTTCAACAGTGGATAAG
GCAGTTGTCACTGTCCCTGCTTACTTCAGTGACTCTCAGCGCCAGGCAACAAAGGATGCT
GGGGCTATTGCTGGTCTTGATGTCGTGCGCATCATCAATGAACCCACTGCTGCTGCCATT
GCCTATGGCCTTGACAAGAAGGGAGGGGGTGGTGGCGAGAAGAATGTCCTTATCTTTGAT
CTTGGAGGTGGCACTTTTGATGTCTCCCTTCTCACAATAGAGGAAGGTCTATTTGAAGTG
AGGGCCACTGCTGGAGACACCCATCTTGGAGGAGACGATTTTGACAACCGTATGGTGAAC
TATTTTGTACAGGAATTCAAGAGGAAGCACAAGATGGACATTAGTGGAAACCCCAGAGCA
CTTGAGAGGTTGAGAACTGCTTGTGAAAGAGCAAAGAGGACTCTCTCATCCACAGCTCAG
ACGAGCATTGAGATTGACTCCTTATATGAAGGTGTTGATTTCTACACAACCATCACTCGT
GCTAGATTTGAAGATCTCAACATGAACCTCTTTAGAAAGTGCATGGAGCCTGTGGATAAG
TGTTTGAGGGATTCTAAGATAGGCAAAAGCAGTGTCCAAGATGTTGTCCTCGTTGGTGGT
TCTACTAGAATTCCAAAGGTGCAGCAAATGTTGCAAGACTTCTTTAATGGAAAGGAGCTT
TGCAAGAGCATTAACCCAGATGAAGCTGTTGCTTATGGCGCTGCTGTGCAGGGTGCCATC
TTAAGTGGAGAAGGTAATAAAAAGGTACAGGATCTGCTGCTCTTGGATGTTACTCCTCTG
TCCCTTGGGTTGGAGACTGCTGGAGGTGTGATGACTGTACTGATTCCGAGGAACACCACT
ATTCCAACCAAGAAGGAGCAGGACTTTTCTACCTACTCAGACAACCAAACTAGTGTCTTG
ATCCAGGTCTATGAGGGTGAGAGAACAAGAAGTAGGGACAACAACTTGTTGGGCAAGTTT
GAGCTTTCTGGCTTTGCTGCAGCCCCAAGGGGTGTACCTAAGATCACCGTTTGCTTTGAT
ATTGATTCTAATGGTATCTTGAATGTCTCTGCGGAGGAGCAGACCACAGGGCAGAAGAAC
AAAATCACTATCACCAATGACAAAGGGAGATTGTCTAAGGAGGACATTGAGAAGATGATG
CAGGAGGCTGAAAAGTACAAATCTGAGGATGAGATGCTCAAGAAGAAGGTGGAAGCAAAG
AACGCCTTAGAGAATTATGCCTACAACGTAAGGAGCACTGTGAAGGATAAGAAGAATGAA
GACAAGATCGCCCCTCTAGAAAAGAAAAAGATAGAGGATGCCGTGGAGGAGGTTATTCAG
TGGTTGGATTCCAGCCAGTTTGCTGGGGCAGATGAGTTTGAGGACAAACTGAAGAAGTTT
GAGGCCATCAGCAAACCAATCATTGGCAATATATATGAGGATACTGTACATCAGGTGGCT
GATGGAGTTCTTGCTGCTGGTGGTCCTCCACCTGCTGCAAGTGCTGCCGTCCCAGTGGTT
GAGGAAGTTGATTAA

Peptide Sequence

PEP ID

VIT_13s0019g00930.t01
PEP Infomation

pep chromosome:12X:13:2720364:2723716:1 gene:VIT_13s0019g00930 transcript:VIT_13s0019g00930.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGNGGAPVIGIDLGTTFSCVGVWQYDHVEIIANDQGNRTTPSYVAFTNTERLIGDAAKN
QVAMNPVNTVFAYSVALRFGVSMFITDAKRLIGRRFSDASIQDDIKLWPFKVIGGIGDKP
TIVVTYKEEEKKFTAQEISSMVLSKMREIAEVYLGSTVDKAVVTVPAYFSDSQRQATKDA
GAIAGLDVVRIINEPTAAAIAYGLDKKGGGGGEKNVLIFDLGGGTFDVSLLTIEEGLFEV
RATAGDTHLGGDDFDNRMVNYFVQEFKRKHKMDISGNPRALERLRTACERAKRTLSSTAQ
TSIEIDSLYEGVDFYTTITRARFEDLNMNLFRKCMEPVDKCLRDSKIGKSSVQDVVLVGG
STRIPKVQQMLQDFFNGKELCKSINPDEAVAYGAAVQGAILSGEGNKKVQDLLLLDVTPL
SLGLETAGGVMTVLIPRNTTIPTKKEQDFSTYSDNQTSVLIQVYEGERTRSRDNNLLGKF
ELSGFAAAPRGVPKITVCFDIDSNGILNVSAEEQTTGQKNKITITNDKGRLSKEDIEKMM
QEAEKYKSEDEMLKKKVEAKNALENYAYNVRSTVKDKKNEDKIAPLEKKKIEDAVEEVIQ
WLDSSQFAGADEFEDKLKKFEAISKPIIGNIYEDTVHQVADGVLAAGGPPPAASAAVPVV
EEVD

Transcript Sequence

Transcript ID

VIT_13s0019g00930.t01
Transcript Infomation

cdna chromosome:12X:13:2720364:2723716:1 gene:VIT_13s0019g00930 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAACAATGGCCGGAAATGGAGGGGCTCCGGTGATCGGAATCGATCTCGGCACGACGTTCT
CGTGCGTCGGAGTGTGGCAGTACGATCATGTTGAAATCATTGCGAATGACCAGGGCAACA
GAACGACGCCATCTTACGTTGCTTTCACTAATACGGAGCGGTTGATAGGAGATGCTGCAA
AGAACCAGGTCGCTATGAACCCTGTCAACACTGTGTTTGCTTATTCTGTTGCTTTGAGGT
TTGGGGTTTCCATGTTCATCACAGATGCAAAGCGTCTGATTGGTCGGAGGTTCAGTGATG
CCTCAATTCAGGATGATATAAAACTCTGGCCGTTCAAGGTCATTGGTGGTATTGGTGACA
AACCCACAATTGTGGTCACTTACAAAGAAGAAGAGAAAAAGTTTACCGCTCAAGAGATTT
CATCTATGGTCCTCTCAAAGATGCGTGAGATTGCTGAAGTCTACCTTGGTTCAACAGTGG
ATAAGGCAGTTGTCACTGTCCCTGCTTACTTCAGTGACTCTCAGCGCCAGGCAACAAAGG
ATGCTGGGGCTATTGCTGGTCTTGATGTCGTGCGCATCATCAATGAACCCACTGCTGCTG
CCATTGCCTATGGCCTTGACAAGAAGGGAGGGGGTGGTGGCGAGAAGAATGTCCTTATCT
TTGATCTTGGAGGTGGCACTTTTGATGTCTCCCTTCTCACAATAGAGGAAGGTCTATTTG
AAGTGAGGGCCACTGCTGGAGACACCCATCTTGGAGGAGACGATTTTGACAACCGTATGG
TGAACTATTTTGTACAGGAATTCAAGAGGAAGCACAAGATGGACATTAGTGGAAACCCCA
GAGCACTTGAGAGGTTGAGAACTGCTTGTGAAAGAGCAAAGAGGACTCTCTCATCCACAG
CTCAGACGAGCATTGAGATTGACTCCTTATATGAAGGTGTTGATTTCTACACAACCATCA
CTCGTGCTAGATTTGAAGATCTCAACATGAACCTCTTTAGAAAGTGCATGGAGCCTGTGG
ATAAGTGTTTGAGGGATTCTAAGATAGGCAAAAGCAGTGTCCAAGATGTTGTCCTCGTTG
GTGGTTCTACTAGAATTCCAAAGGTGCAGCAAATGTTGCAAGACTTCTTTAATGGAAAGG
AGCTTTGCAAGAGCATTAACCCAGATGAAGCTGTTGCTTATGGCGCTGCTGTGCAGGGTG
CCATCTTAAGTGGAGAAGGTAATAAAAAGGTACAGGATCTGCTGCTCTTGGATGTTACTC
CTCTGTCCCTTGGGTTGGAGACTGCTGGAGGTGTGATGACTGTACTGATTCCGAGGAACA
CCACTATTCCAACCAAGAAGGAGCAGGACTTTTCTACCTACTCAGACAACCAAACTAGTG
TCTTGATCCAGGTCTATGAGGGTGAGAGAACAAGAAGTAGGGACAACAACTTGTTGGGCA
AGTTTGAGCTTTCTGGCTTTGCTGCAGCCCCAAGGGGTGTACCTAAGATCACCGTTTGCT
TTGATATTGATTCTAATGGTATCTTGAATGTCTCTGCGGAGGAGCAGACCACAGGGCAGA
AGAACAAAATCACTATCACCAATGACAAAGGGAGATTGTCTAAGGAGGACATTGAGAAGA
TGATGCAGGAGGCTGAAAAGTACAAATCTGAGGATGAGATGCTCAAGAAGAAGGTGGAAG
CAAAGAACGCCTTAGAGAATTATGCCTACAACGTAAGGAGCACTGTGAAGGATAAGAAGA
ATGAAGACAAGATCGCCCCTCTAGAAAAGAAAAAGATAGAGGATGCCGTGGAGGAGGTTA
TTCAGTGGTTGGATTCCAGCCAGTTTGCTGGGGCAGATGAGTTTGAGGACAAACTGAAGA
AGTTTGAGGCCATCAGCAAACCAATCATTGGCAATATATATGAGGATACTGTACATCAGG
TGGCTGATGGAGTTCTTGCTGCTGGTGGTCCTCCACCTGCTGCAAGTGCTGCCGTCCCAG
TGGTTGAGGAAGTTGATTAAGT