Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0178g00020.t01
CDS Infomation

cds chromosome:12X:12:8339579:8354490:-1 gene:VIT_12s0178g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATAGGGTGTTCCAGAGGCTTCGGAATCTCGACGCTTACCCTAAAATCAATGAGGAT
TTCTACAGCCGCACCTTCTCCGGTGGCCTTATCACGCTAATCTCCTCCATCGTTATGCTC
TTCCTCTTCTTCTCTGAGCTCAGACTATACCTCCACACAGTTACAGAAACAAAACTTGTG
GTCGATACTTCAAGAGGAGGAACACTTCGCATCAATTTTGATGTGACTTTTCCTGCCGTT
CCTTGTTCGGTACTCACTCTTGATGCCATGGATATTAGTGGAGAACAGCATCATGATATA
AAACATGATATTGTGAAGAAAAGAATTGATGCCCATGGTAATGTGGTAGCAGTTAGGCAA
GATGGAATTGGTGGCCCTCAGATTGAAAAGCCGTTACAAAGACATGGTGGCAGGCTTGAA
CACAATGAAAAATATTGTGGTTCATGCTATGGAGCAGAAGTGACGGATGATGATTGTTGT
AATTCATGTGATGAAGTTCGTGAAGCATATAGAAAGAAAGGTTGGGGGATGACAAATCCA
GATTTGATTGATCAGTGCAAAAGAGAAGGCTTTGTCCAAAAGGTTAAAGAGGAAGAAGGT
GAAGGATGCAATGTCTATGGCTTTTTAGAAGTTAATAAAGTTGCAGGAAACTTTCATTTT
TCACCTGGGAAAGGCTTTTACCAGTCAAATATTCATGTGAATGATTTGCTGGCTATTTCG
AAGGATGGTTATAATATAAGTCACAGGATCAATAAATTAGCTTTTGGAGACCATTTCCCT
GGTGTTGTAAATCCCCTTGATGGGGCACAATGGTTTCAAGATGCACCTGATGGAATGTAC
CAGTATTTCATCAAGGTGGTTCCTACTATCTACACCGACATTAGAGGGCACACTATTCAG
TCAAATCAGTTCTCTGTCACAGAGCATTTTAGGAGTGCAGAACCTGGTCGCCCACACTCT
CTTCCTGGAGTGTACTTCTTTTATGACCTTTCTCCAATTAAGGTTACTTCCAAAGAGGAA
CACTCGTCATTCCTACACTTCATGACAAATATTTGTGCCATAGTTGGAGGTATTTTCACA
GTTTCAGGTATAATAGACTCATTCGTGTACCATGGTCATAGGGCAATCAAGAAGAAGATG
GAACTTGGGAAATTCAGCTGA

Peptide Sequence

PEP ID

VIT_12s0178g00020.t01
PEP Infomation

pep chromosome:12X:12:8339579:8354490:-1 gene:VIT_12s0178g00020 transcript:VIT_12s0178g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDRVFQRLRNLDAYPKINEDFYSRTFSGGLITLISSIVMLFLFFSELRLYLHTVTETKLV
VDTSRGGTLRINFDVTFPAVPCSVLTLDAMDISGEQHHDIKHDIVKKRIDAHGNVVAVRQ
DGIGGPQIEKPLQRHGGRLEHNEKYCGSCYGAEVTDDDCCNSCDEVREAYRKKGWGMTNP
DLIDQCKREGFVQKVKEEEGEGCNVYGFLEVNKVAGNFHFSPGKGFYQSNIHVNDLLAIS
KDGYNISHRINKLAFGDHFPGVVNPLDGAQWFQDAPDGMYQYFIKVVPTIYTDIRGHTIQ
SNQFSVTEHFRSAEPGRPHSLPGVYFFYDLSPIKVTSKEEHSSFLHFMTNICAIVGGIFT
VSGIIDSFVYHGHRAIKKKMELGKFS

Transcript Sequence

Transcript ID

VIT_12s0178g00020.t01
Transcript Infomation

cdna chromosome:12X:12:8339579:8354490:-1 gene:VIT_12s0178g00020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGAACAAACACACAAGGCAAAGCTTTGAGGGTGGTTTTGGGGTTGGGCGGCGATGGATA
GGGTGTTCCAGAGGCTTCGGAATCTCGACGCTTACCCTAAAATCAATGAGGATTTCTACA
GCCGCACCTTCTCCGGTGGCCTTATCACGCTAATCTCCTCCATCGTTATGCTCTTCCTCT
TCTTCTCTGAGCTCAGACTATACCTCCACACAGTTACAGAAACAAAACTTGTGGTCGATA
CTTCAAGAGGAGGAACACTTCGCATCAATTTTGATGTGACTTTTCCTGCCGTTCCTTGTT
CGGTACTCACTCTTGATGCCATGGATATTAGTGGAGAACAGCATCATGATATAAAACATG
ATATTGTGAAGAAAAGAATTGATGCCCATGGTAATGTGGTAGCAGTTAGGCAAGATGGAA
TTGGTGGCCCTCAGATTGAAAAGCCGTTACAAAGACATGGTGGCAGGCTTGAACACAATG
AAAAATATTGTGGTTCATGCTATGGAGCAGAAGTGACGGATGATGATTGTTGTAATTCAT
GTGATGAAGTTCGTGAAGCATATAGAAAGAAAGGTTGGGGGATGACAAATCCAGATTTGA
TTGATCAGTGCAAAAGAGAAGGCTTTGTCCAAAAGGTTAAAGAGGAAGAAGGTGAAGGAT
GCAATGTCTATGGCTTTTTAGAAGTTAATAAAGTTGCAGGAAACTTTCATTTTTCACCTG
GGAAAGGCTTTTACCAGTCAAATATTCATGTGAATGATTTGCTGGCTATTTCGAAGGATG
GTTATAATATAAGTCACAGGATCAATAAATTAGCTTTTGGAGACCATTTCCCTGGTGTTG
TAAATCCCCTTGATGGGGCACAATGGTTTCAAGATGCACCTGATGGAATGTACCAGTATT
TCATCAAGGTGGTTCCTACTATCTACACCGACATTAGAGGGCACACTATTCAGTCAAATC
AGTTCTCTGTCACAGAGCATTTTAGGAGTGCAGAACCTGGTCGCCCACACTCTCTTCCTG
GAGTGTACTTCTTTTATGACCTTTCTCCAATTAAGGTTACTTCCAAAGAGGAACACTCGT
CATTCCTACACTTCATGACAAATATTTGTGCCATAGTTGGAGGTATTTTCACAGTTTCAG
GTATAATAGACTCATTCGTGTACCATGGTCATAGGGCAATCAAGAAGAAGATGGAACTTG
GGAAATTCAGCTGATTATTTGCCAATTGTGTCATTTTCAGTATCTCGGTTGTCTCTCCTG
TTGAAATCGATTGGAATTTCTCTGATGAGGGCCAGGTGCTTCTCTCTAGCCACAAACTAG
GTTTATGTGAGGAAAAAGCTGGACTAATTGTCGGGTTCTTTCTTTTGTTTTCATTTTGCC
TTGCCCTCCCTAGACCTCCACACACAACCCCCTTCTGCCCCTTTTTATTTTTGGGTTTCC
CTCAATTCAGTCTCTGTAATTTATTTCTATTTTGGATACTTGTTGAAAACGGAAATTGAT
TGAAATTTATCTTCGTTTTTAGGTGAGGATTGGAATTTTGTCCTT