Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0178g00010.t01
CDS Infomation

cds chromosome:12X:12:8336848:8338698:1 gene:VIT_12s0178g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGGCATCCCTGAGGCATTGGAAGCAGCTCGCAAATTTGGAATGAGGATAATCCCG
GGTGTTGAGATTAGTACTATGTTTTCCCCAAGAGGAGAGTCTGGGTCAGAGGAACCAGTT
CATGTCCTTGCCTATTACAGTAGCTGTGGTCCAACAAGATGCGAGGAACTGGAGAAGTTC
TTGGCTAACATAAGAGATGGGCGTTACCTTCGTGCAAAGAACATGGTTTTGAAACTGAAC
AATCTCAAGTTGCCCCTCAAGTGGGAGCACGTAGCCAAAATTGCAGGCAAGGGAGTTGCT
CCAGGGAGACTGCATGTGGCTCGTGCTATGGTTGAAGCAGGCCATGTGGAGAATCTGAGA
CAAGCTTTTGCCCGATATCTTTATGATGGTGGACCTGCATATTCTACGGGAAGTGAGCCT
CAAGCAGAGGAAGCAGTGAAGTTGATATGTGAAACAGGAGGTGTGGCTGTACTGGCACAT
CCATGGGCATTAAAGAATCCAGTGACAATTGTCAGGAGGTTAAAAGATGCAGGCCTTCAT
GGGATAGAAGTCTACAGGAGTGACGGGAAACTGGCAGCATATAATGATCTAGCAGACGAC
TATGGTCTTGTGAAGCTTGGAGGATCAGATTATCATGGGAGAGGTGGACAGGGTGAGTCG
GATCTGGGCAGCGTGAACCTTCCAGTGTTGGCTGTACACGACTTCCTGAAGGTAGCCCGA
CCAATCTGGTGCAATGCTATCAGAAACATTCTAGAGAGCTACATCAAGGAACCCTCCGAT
ATGAATCTAGAGCAGATCACTAGGTTTGCAAGGAACAGAAATTCTAAAGGGGATTCTCCT
CTGGGGTGTGGGAAGGACTTGATTGATCTTTGTTTAACCTCATGGTTGACAAACGAAGAA
AGGCAGAATCCAGAGTTTGAAGCCATCAAGCTTAAGTTTTCCAACATCTCAATTAATGTT
CCCATTGAGAGTAATTAG

Peptide Sequence

PEP ID

VIT_12s0178g00010.t01
PEP Infomation

pep chromosome:12X:12:8336848:8338698:1 gene:VIT_12s0178g00010 transcript:VIT_12s0178g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGIPEALEAARKFGMRIIPGVEISTMFSPRGESGSEEPVHVLAYYSSCGPTRCEELEKF
LANIRDGRYLRAKNMVLKLNNLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLR
QAFARYLYDGGPAYSTGSEPQAEEAVKLICETGGVAVLAHPWALKNPVTIVRRLKDAGLH
GIEVYRSDGKLAAYNDLADDYGLVKLGGSDYHGRGGQGESDLGSVNLPVLAVHDFLKVAR
PIWCNAIRNILESYIKEPSDMNLEQITRFARNRNSKGDSPLGCGKDLIDLCLTSWLTNEE
RQNPEFEAIKLKFSNISINVPIESN

Transcript Sequence

Transcript ID

VIT_12s0178g00010.t01
Transcript Infomation

cdna chromosome:12X:12:8336848:8338698:1 gene:VIT_12s0178g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTAAAAGTTCTTGCTCTGACTGATCATGACACAATGTCTGGCATCCCTGAGGCATTGGA
AGCAGCTCGCAAATTTGGAATGAGGATAATCCCGGGTGTTGAGATTAGTACTATGTTTTC
CCCAAGAGGAGAGTCTGGGTCAGAGGAACCAGTTCATGTCCTTGCCTATTACAGTAGCTG
TGGTCCAACAAGATGCGAGGAACTGGAGAAGTTCTTGGCTAACATAAGAGATGGGCGTTA
CCTTCGTGCAAAGAACATGGTTTTGAAACTGAACAATCTCAAGTTGCCCCTCAAGTGGGA
GCACGTAGCCAAAATTGCAGGCAAGGGAGTTGCTCCAGGGAGACTGCATGTGGCTCGTGC
TATGGTTGAAGCAGGCCATGTGGAGAATCTGAGACAAGCTTTTGCCCGATATCTTTATGA
TGGTGGACCTGCATATTCTACGGGAAGTGAGCCTCAAGCAGAGGAAGCAGTGAAGTTGAT
ATGTGAAACAGGAGGTGTGGCTGTACTGGCACATCCATGGGCATTAAAGAATCCAGTGAC
AATTGTCAGGAGGTTAAAAGATGCAGGCCTTCATGGGATAGAAGTCTACAGGAGTGACGG
GAAACTGGCAGCATATAATGATCTAGCAGACGACTATGGTCTTGTGAAGCTTGGAGGATC
AGATTATCATGGGAGAGGTGGACAGGGTGAGTCGGATCTGGGCAGCGTGAACCTTCCAGT
GTTGGCTGTACACGACTTCCTGAAGGTAGCCCGACCAATCTGGTGCAATGCTATCAGAAA
CATTCTAGAGAGCTACATCAAGGAACCCTCCGATATGAATCTAGAGCAGATCACTAGGTT
TGCAAGGAACAGAAATTCTAAAGGGGATTCTCCTCTGGGGTGTGGGAAGGACTTGATTGA
TCTTTGTTTAACCTCATGGTTGACAAACGAAGAAAGGCAGAATCCAGAGTTTGAAGCCAT
CAAGCTTAAGTTTTCCAACATCTCAATTAATGTTCCCATTGAGAGTAATTAGTTCTCACT
TCTCACCCGAATTAATTTATTTACCTTCACCATTAATTTTTCCTTTGATGTCCCATTTCC
CATTCTTTTTTTGGG