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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0142g00620.t01
CDS Infomation

cds chromosome:12X:12:561908:563202:-1 gene:VIT_12s0142g00620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCCATCTGAGGCTGAAACTCTCTTCAACATCATGGATTCCATGTCCTCTGACCAT
ACCTGGAGAATCTCCTTTCCCAATCCTTGTAATTCTGCTTCATCTTGGCCAGGGATTGAG
TGCAAACCAGGTCAAAATGACAAGCTACTCCATGTCTCTAGGCTTGATTTTGGGTCACCT
CCAAACCCATCCTGCAAGACCACTGCCACATTCCCATCACAAGTCTTTACCCTCCCTTAT
CTTCAGTCTCTCTTCTTTTTTCATTGCTTCACTCAAACCAAAACCAACATTTCTCTCCCT
CTCCTCTCCCACCCCTCCAATGCCTCTTCACTGCAACAACTCAGTCTCAGATCAAACCCT
GCACTTGTTGGCCCAATCCCATCTCAGATCTCCTCACTCCACTCCCTACAGATACTCACC
TTGTCTCAGAACCGCCTTGCTGGGAGAATTCCAGTTCAAATTTTCAGCTTGAACTCTTTG
GTACACCTTGATTTGAGCTATAACTTGCTTACCGGCCCAATCCCACCCCAATTGGGCAGT
CTCAGAAATCTTGTTGGGCTTGATTTGAGCTATAATTCGCTCTCTGGATCAATCCCTGAC
ACGATTGGCCAGATGGGCCTGCTTCAGAAGTTCGATTTGAGCTCAAATTTTCTTGTTGGA
AACATACCAGATAGCATTGAGAAGCTGAATTCGTTGGTCTTCATGGCTTTGAGCAGCAAC
AGGTTAGGTGGGAAGTTCCCTCAGGGATTGGCAAAGTTACAAAGCTTGCAGTACTTCATC
ATGGATGATAATCCCATGTTCATCCCACTGCCAGAAGAGTTTGGAAAGCTGATGAAACTG
CAAGAGCTCAGGGTTGCTAATTCAGGGTATTCAGGCACCATACCAACAAGCTTTTCACAT
CTCACAAATTTAAGCACACTGTCTCTCCAAAACAACAGATTGACAGGTGAAATTCCAGAA
GGTTTTGGTAGTCTTTCTCACATATATCACTTGAATCTCAGTAGAAACATGCTGGCTGGT
ATAGTTCCTTTCAACTCTATCTTCTTGAAGAGGTTGGGAAGGAACTTGGACTTGAGTGCG
AACCCGGGGCTGTGTCTGAGTCCATCAGAAGCATATGGAGTGAAGATTGGAGTGAATGTA
TGTGGAACCAACAGGACGGTCTCTACGATTCAGCCATTCAACAAATCTGAAGCCCCATCT
GGGCTGTGCAAATCATTATTTCTTCTCTGTTTCATCTTGTGTACTAGTGTCTTGGCTCTG
CATCATATATCGTTTTCAGCATGA

Peptide Sequence

PEP ID

VIT_12s0142g00620.t01
PEP Infomation

pep chromosome:12X:12:561908:563202:-1 gene:VIT_12s0142g00620 transcript:VIT_12s0142g00620.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDPSEAETLFNIMDSMSSDHTWRISFPNPCNSASSWPGIECKPGQNDKLLHVSRLDFGSP
PNPSCKTTATFPSQVFTLPYLQSLFFFHCFTQTKTNISLPLLSHPSNASSLQQLSLRSNP
ALVGPIPSQISSLHSLQILTLSQNRLAGRIPVQIFSLNSLVHLDLSYNLLTGPIPPQLGS
LRNLVGLDLSYNSLSGSIPDTIGQMGLLQKFDLSSNFLVGNIPDSIEKLNSLVFMALSSN
RLGGKFPQGLAKLQSLQYFIMDDNPMFIPLPEEFGKLMKLQELRVANSGYSGTIPTSFSH
LTNLSTLSLQNNRLTGEIPEGFGSLSHIYHLNLSRNMLAGIVPFNSIFLKRLGRNLDLSA
NPGLCLSPSEAYGVKIGVNVCGTNRTVSTIQPFNKSEAPSGLCKSLFLLCFILCTSVLAL
HHISFSA

Transcript Sequence

Transcript ID

VIT_12s0142g00620.t01
Transcript Infomation

cdna chromosome:12X:12:561908:563202:-1 gene:VIT_12s0142g00620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACCCAACAACATGGATCCATCTGAGGCTGAAACTCTCTTCAACATCATGGATTCCATGT
CCTCTGACCATACCTGGAGAATCTCCTTTCCCAATCCTTGTAATTCTGCTTCATCTTGGC
CAGGGATTGAGTGCAAACCAGGTCAAAATGACAAGCTACTCCATGTCTCTAGGCTTGATT
TTGGGTCACCTCCAAACCCATCCTGCAAGACCACTGCCACATTCCCATCACAAGTCTTTA
CCCTCCCTTATCTTCAGTCTCTCTTCTTTTTTCATTGCTTCACTCAAACCAAAACCAACA
TTTCTCTCCCTCTCCTCTCCCACCCCTCCAATGCCTCTTCACTGCAACAACTCAGTCTCA
GATCAAACCCTGCACTTGTTGGCCCAATCCCATCTCAGATCTCCTCACTCCACTCCCTAC
AGATACTCACCTTGTCTCAGAACCGCCTTGCTGGGAGAATTCCAGTTCAAATTTTCAGCT
TGAACTCTTTGGTACACCTTGATTTGAGCTATAACTTGCTTACCGGCCCAATCCCACCCC
AATTGGGCAGTCTCAGAAATCTTGTTGGGCTTGATTTGAGCTATAATTCGCTCTCTGGAT
CAATCCCTGACACGATTGGCCAGATGGGCCTGCTTCAGAAGTTCGATTTGAGCTCAAATT
TTCTTGTTGGAAACATACCAGATAGCATTGAGAAGCTGAATTCGTTGGTCTTCATGGCTT
TGAGCAGCAACAGGTTAGGTGGGAAGTTCCCTCAGGGATTGGCAAAGTTACAAAGCTTGC
AGTACTTCATCATGGATGATAATCCCATGTTCATCCCACTGCCAGAAGAGTTTGGAAAGC
TGATGAAACTGCAAGAGCTCAGGGTTGCTAATTCAGGGTATTCAGGCACCATACCAACAA
GCTTTTCACATCTCACAAATTTAAGCACACTGTCTCTCCAAAACAACAGATTGACAGGTG
AAATTCCAGAAGGTTTTGGTAGTCTTTCTCACATATATCACTTGAATCTCAGTAGAAACA
TGCTGGCTGGTATAGTTCCTTTCAACTCTATCTTCTTGAAGAGGTTGGGAAGGAACTTGG
ACTTGAGTGCGAACCCGGGGCTGTGTCTGAGTCCATCAGAAGCATATGGAGTGAAGATTG
GAGTGAATGTATGTGGAACCAACAGGACGGTCTCTACGATTCAGCCATTCAACAAATCTG
AAGCCCCATCTGGGCTGTGCAAATCATTATTTCTTCTCTGTTTCATCTTGTGTACTAGTG
TCTTGGCTCTGCATCATATATCGTTTTCAGCATGA