Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0142g00580.t01
CDS Infomation

cds chromosome:12X:12:495534:526392:-1 gene:VIT_12s0142g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGTGAAACAATTTATAAAGAGCCTCCATGCCTTTCCTCGTGCAGAAGAACACTTG
TTGCAGAAGACCCAATCTGGAGCAGTTGTCTCCATCATTGGTTTAGTCATAATGGCTACA
TTGTTCTTGCACGAGCTGAGATATTATCTTACTACTTATACAGTTCATCAGATGTCTGTA
GACTTGAAACGTGGAGAAACTCTTCCAATCCACATAAATATGACCTTTCCTTCTTTACCT
TGTGATGTCTTAAGCGTAGATGCCATTGATATGTCGGGCAAGCATGAAGTGGATCTTGAT
ACAAACATTTGGAAACTTCGCCTGAATAGAGATGGCTTTATCATTGGTACTGAGTACTTG
TCTGATCTTGTGGAAAAGGAACATGCTGATCACAAACATGATCACAATAAAGATCATCAT
GGGGATTCAGATCAGAAGCTGCATGCACATAGTTTTGATCAAGATGCTGAAAATATGGTC
AAGAAGGTGAAACAAGCATTAGCAAATGGGGAAGGATGCCGGGTTTATGGGGTTTTGGAT
GTCCAAAGGGTAGCTGGGAACTTCCATATTTCGGTTCACGGATTAAATATTTTTGTTGCT
CAAATGATTTTTGATGGAGCTATTCATGTGAATGTAAGTCACATCATTCATGATTTGTCA
TTTGGGCCAAAATATCCAGGACTCCATAATCCACTTGATGGGACGGTGCGGATTCTGCGT
GGGGCAAGTGGAACATTCAAATATTACATAAAGATTGTTCCAACTGAATACAGATATATT
TCCAAAGAAGTTTTACCAACTAATCAATTCTCTGTCATGGAATATTTTTCCCCCATGAAT
GAGTTTGATAGAACTTGGCCAGCTGTTTACTTCCTGTACGATCTATCACCGGTTACTGTG
ACAATCAAAGAAGAACGCCGCAGTTTTCTTCACTTCATTACTCGGCTTTGTGCGGTATTA
GGTGGTACTTTTGCTTTAACAGGAATGCTGGATCGTTGGATGTACAGGTTTCTTGAGATG
CTGACAAAACCAAACGCGAAAAGTGTTTATAGATAA

Peptide Sequence

PEP ID

VIT_12s0142g00580.t01
PEP Infomation

pep chromosome:12X:12:495534:526392:-1 gene:VIT_12s0142g00580 transcript:VIT_12s0142g00580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGVKQFIKSLHAFPRAEEHLLQKTQSGAVVSIIGLVIMATLFLHELRYYLTTYTVHQMSV
DLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNRDGFIIGTEYL
SDLVEKEHADHKHDHNKDHHGDSDQKLHAHSFDQDAENMVKKVKQALANGEGCRVYGVLD
VQRVAGNFHISVHGLNIFVAQMIFDGAIHVNVSHIIHDLSFGPKYPGLHNPLDGTVRILR
GASGTFKYYIKIVPTEYRYISKEVLPTNQFSVMEYFSPMNEFDRTWPAVYFLYDLSPVTV
TIKEERRSFLHFITRLCAVLGGTFALTGMLDRWMYRFLEMLTKPNAKSVYR

Transcript Sequence

Transcript ID

VIT_12s0142g00580.t01
Transcript Infomation

cdna chromosome:12X:12:495534:526392:-1 gene:VIT_12s0142g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGAAGAAGTTGACGATTAATCTCACAACCTCCAAACCCTAAAGCCTTAGGTTATTTTAC
TCTGCTTTCTTGAATTGAAGATAGAGAGATGGGTGTGAAACAATTTATAAAGAGCCTCCA
TGCCTTTCCTCGTGCAGAAGAACACTTGTTGCAGAAGACCCAATCTGGAGCAGTTGTCTC
CATCATTGGTTTAGTCATAATGGCTACATTGTTCTTGCACGAGCTGAGATATTATCTTAC
TACTTATACAGTTCATCAGATGTCTGTAGACTTGAAACGTGGAGAAACTCTTCCAATCCA
CATAAATATGACCTTTCCTTCTTTACCTTGTGATGTCTTAAGCGTAGATGCCATTGATAT
GTCGGGCAAGCATGAAGTGGATCTTGATACAAACATTTGGAAACTTCGCCTGAATAGAGA
TGGCTTTATCATTGGTACTGAGTACTTGTCTGATCTTGTGGAAAAGGAACATGCTGATCA
CAAACATGATCACAATAAAGATCATCATGGGGATTCAGATCAGAAGCTGCATGCACATAG
TTTTGATCAAGATGCTGAAAATATGGTCAAGAAGGTGAAACAAGCATTAGCAAATGGGGA
AGGATGCCGGGTTTATGGGGTTTTGGATGTCCAAAGGGTAGCTGGGAACTTCCATATTTC
GGTTCACGGATTAAATATTTTTGTTGCTCAAATGATTTTTGATGGAGCTATTCATGTGAA
TGTAAGTCACATCATTCATGATTTGTCATTTGGGCCAAAATATCCAGGACTCCATAATCC
ACTTGATGGGACGGTGCGGATTCTGCGTGGGGCAAGTGGAACATTCAAATATTACATAAA
GATTGTTCCAACTGAATACAGATATATTTCCAAAGAAGTTTTACCAACTAATCAATTCTC
TGTCATGGAATATTTTTCCCCCATGAATGAGTTTGATAGAACTTGGCCAGCTGTTTACTT
CCTGTACGATCTATCACCGGTTACTGTGACAATCAAAGAAGAACGCCGCAGTTTTCTTCA
CTTCATTACTCGGCTTTGTGCGGTATTAGGTGGTACTTTTGCTTTAACAGGAATGCTGGA
TCGTTGGATGTACAGGTTTCTTGAGATGCTGACAAAACCAAACGCGAAAAGTGTTTATAG
ATAAGGGTTGGGCATTATAACTGGCTTGTGCTTTCCAAGGAATTCTCTAGTCATGCTATA
GATTTTTGCAACCTTCCAGTTTCTATTGAGCAGATTGTATTTATTGAGTTAATATATTGG
ATTACTTGTGTAATTTCTGTGCTTGTTTCTCCTGTCCTCATTGCTAGGGAGTATAGCTTC
ATTGGTTGGTTGGTAGGTAAGCTGGTTTCAACAGCATCATGGCTCTTTCCTTGGGGAGTT
GACTGTTGTCTTAGGTACTTGTACATTGTGGGATTCACATGGGAAGCCCCTAGATACATG
GTCTACCAAAGACCATGGTTGTATATTTTCTTTTACACATTAAAATAGATTTCAGGGTTA
ACAATTTTGTTATTATTATTACTGGCGATGCTTCAGTATTGTGTTGATGAATAATGGTGT
TGTTTCTCTAATATGAATAAAATAAAACTTTATCC