Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0142g00360.t01
CDS Infomation

cds chromosome:12X:12:279426:291956:-1 gene:VIT_12s0142g00360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAGAGGGAAGATCGAAATTAAGCGGATCGAGAACACCACTAATCGACAAGTCACC
TTCTGTAAGCGCCGCAACGGCTTGCTCAAAAAGGCCTATGAATTATCGGTCTTATGTGAT
GCAGAAGTTGCTCTCATCGTCTTCTCCAGCCGTGGCCGCCTCTATGAATATGCTAACAAC
AGTGTGAGAACGACAATCGAAAGGTACAAAAAAGTGTGTTCTGATTCCTCCAATACCGGA
TCTGTTTCTGAAGCTAATGCTCAGTTTTACCAGCAAGAAGCCTCCAAATTGCGCCGTCAA
ATCAGGGATATACAGAATTTGAACAGGCATATTCTGGGTGAGGCTCTTAGCTCTCTGAAC
TTTAAGGAACTCAAGAATCTGGAGACCAGGTTGGAGAAAGGTATCAGCAGAATCAGATCC
AAAAAGAATGAATTGCTGTTTGCTGAAATCGAGTATATGCAAAAGAGGGAGATTGAGCTC
CAAAACAGTAACTTATTTCTGCGAGCACAGATAGCTGAGAATGAGAGAGCCCAACAGCAA
ATGAACCTGATGCCAGGGTCTCAGTACGAGAGCGTGCCGCAGCAGCCATACGACTCTCAA
AACTTGCTCCCTGTTAACCTCCTGGACCCTAATCACCATTACTCTCGCCACGACCAAACA
GCTCTCCAACTAGTGACTATTTGTCTACTTTATTTATATCTAAAAACTTATTTTTCCTCA
ATCTTAAAAATTAATAAATTAATGAAATATCATTTTATTGTTGCTTTATCTTATAATGGA
TTAGTGAGAAGTGGTGCTGTATTTGTGGGTCTCTTCGTGGAGTAG

Peptide Sequence

PEP ID

VIT_12s0142g00360.t01
PEP Infomation

pep chromosome:12X:12:279426:291956:-1 gene:VIT_12s0142g00360 transcript:VIT_12s0142g00360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN
SVRTTIERYKKVCSDSSNTGSVSEANAQFYQQEASKLRRQIRDIQNLNRHILGEALSSLN
FKELKNLETRLEKGISRIRSKKNELLFAEIEYMQKREIELQNSNLFLRAQIAENERAQQQ
MNLMPGSQYESVPQQPYDSQNLLPVNLLDPNHHYSRHDQTALQLVTICLLYLYLKTYFSS
ILKINKLMKYHFIVALSYNGLVRSGAVFVGLFVE

Transcript Sequence

Transcript ID

VIT_12s0142g00360.t01
Transcript Infomation

cdna chromosome:12X:12:279426:291956:-1 gene:VIT_12s0142g00360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TACATGAGAAAAAATGGACGGTTGATGGAATCTGAAGGAGAACATCAAATTCCTTTTTTA
TCTCTATCTTTCTCGATCTCTCCCTCTCCCTCTCCATCTTCTTCTTCTTCTTCTTCTTCT
TCTTCAAAACAAATTGCATAGGAAGAGGGACACACTAGTGGTGGTAGATCTCTAGGGAGA
ATAATAGCGTGAGTTGGATGATTGTTGGATGGTCTATTTTGTGTCCATAAATACCCATCT
GATAGAACAAACCATTTCCATTTTCTGCAACTCTCCTGTGCAGAACTATACCAAAGAATC
GTGTGAATTCAACCAGAGGAGAAAAAAAAAAAGAAAAAATTGTTGTTTCCACCCTTGTTT
ATCTACTTCTCCTAAGTTTCCTTACCAGCTCATTTCAGCTTTCAACCACGGAGTTTCCGA
ATCAAGCCTCGGAGGGGTCTTCCCAAAGAAAAATGGGAAGAGGGAAGATCGAAATTAAGC
GGATCGAGAACACCACTAATCGACAAGTCACCTTCTGTAAGCGCCGCAACGGCTTGCTCA
AAAAGGCCTATGAATTATCGGTCTTATGTGATGCAGAAGTTGCTCTCATCGTCTTCTCCA
GCCGTGGCCGCCTCTATGAATATGCTAACAACAGTGTGAGAACGACAATCGAAAGGTACA
AAAAAGTGTGTTCTGATTCCTCCAATACCGGATCTGTTTCTGAAGCTAATGCTCAGTTTT
ACCAGCAAGAAGCCTCCAAATTGCGCCGTCAAATCAGGGATATACAGAATTTGAACAGGC
ATATTCTGGGTGAGGCTCTTAGCTCTCTGAACTTTAAGGAACTCAAGAATCTGGAGACCA
GGTTGGAGAAAGGTATCAGCAGAATCAGATCCAAAAAGAATGAATTGCTGTTTGCTGAAA
TCGAGTATATGCAAAAGAGGGAGATTGAGCTCCAAAACAGTAACTTATTTCTGCGAGCAC
AGATAGCTGAGAATGAGAGAGCCCAACAGCAAATGAACCTGATGCCAGGGTCTCAGTACG
AGAGCGTGCCGCAGCAGCCATACGACTCTCAAAACTTGCTCCCTGTTAACCTCCTGGACC
CTAATCACCATTACTCTCGCCACGACCAAACAGCTCTCCAACTAGTGACTATTTGTCTAC
TTTATTTATATCTAAAAACTTATTTTTCCTCAATCTTAAAAATTAATAAATTAATGAAAT
ATCATTTTATTGTTGCTTTATCTTATAATGGATTAGTGAGAAGTGGTGCTGTATTTGTGG
GTCTCTTCGTGGAGTAGAATGGGAATGAAGAGATATGTTTTCCTGCAGATTGTAAGTGTA
GTTAACTTTATGTGAAGTGATGGTGAGAAGCAGTGTGTCCAAGTAGAGAAACAAGTGAGA
GAGCCCTTTCCCATTTTCTCATAAAACTCTCTTTTTAAATAACTCTGTTGCCTGCCACAA
ATTAAGAAGATGTATTAATTCATCTTGTATGACTGAAACACTGAAACTGAAGATGAAACT
GGAAACTACCTACATTGCTTCAATCCACTTGCTCCAAAT