Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0142g00260.t01
CDS Infomation

cds chromosome:12X:12:209962:212600:-1 gene:VIT_12s0142g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGAAGCACAGCAATAAATCATTGAAGCCATGGCACAGATCGCATAAATGTCCTGTG
CCGGTTCTGATTGTACTTCTGATTCTAATAATTGTAGTTTTAATGTTGTCATTTCACAAC
AATGGAAAACAGCCCAGTTCTTCAATTGGAGTTATGACACAAAGCAGTGATCCTCTGGTC
CAATTCCACCCCACCATAGAGTTCAGGAATGGAACAGATGTTATATGGCAAATACCCGAT
TCACCTAAGGCTGTTCTCTTTCTGGCCCATGGGTGTAATGGCCAAGCGGTTAACTTTTGG
GACAGATCCCCCAGCTGTCCGGATTGTGTTGGTCTTCCTGAAGAAAGGTTAATAGTTCTT
CACTCTCTCAATCGAAAATTTGCTGTTCTTACCATTTCAAGTGCTGGGAAATGCTGGTCA
TTTGGGAAGGAAAGTTTAATTGTTAAAGGAATCATCCAATGGTGGATTGAGAAAAACAAG
CTTGAAAAGCTTCCTCTTGTGGCTTTGGGGGCCTCCTCTGGTGGGTACTTTGTTTCTGTG
CTTGCCACTAATTTGAGATTTAGTAGTGTTACACTGATGATTGCTGAAGGGCTGTTTCAT
AAAATAGATATTATGAAGGATTATCCACCCACCCTTTTTGTTCACATGCCCAAAGATCAA
GCTAGGAAACAGAGAATAGCTGAAAATATGGAGATTTTGAGGAATAAAGGCATTGATGTT
GCAGAGGTTAAATGCATGGAATTCCCCCTGTCGCCATACTTTTTGGCTGACAGAATCCCA
GGTGTTGATAAGAACATTTCTGCCAAGTTGTTTGGGCTCTTGCGTGACAAGGGCTTTATC
AATGTGAATGGATATATGAGGAACGATGGGCGTGCAACAAATTGGAAAAAAGTTCTCAGT
GAGAGTAATATTATTTTTCCAGATTGGGATATATTTGTCCACCACATTCAGGAAGAACTG
AATCTGGCATTTGCATATCATGAAATGACAAGCTTGCAGTCAGAGCAGATTTTTAACTGG
TTTGAATCTCATATGACTTGA

Peptide Sequence

PEP ID

VIT_12s0142g00260.t01
PEP Infomation

pep chromosome:12X:12:209962:212600:-1 gene:VIT_12s0142g00260 transcript:VIT_12s0142g00260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLKHSNKSLKPWHRSHKCPVPVLIVLLILIIVVLMLSFHNNGKQPSSSIGVMTQSSDPLV
QFHPTIEFRNGTDVIWQIPDSPKAVLFLAHGCNGQAVNFWDRSPSCPDCVGLPEERLIVL
HSLNRKFAVLTISSAGKCWSFGKESLIVKGIIQWWIEKNKLEKLPLVALGASSGGYFVSV
LATNLRFSSVTLMIAEGLFHKIDIMKDYPPTLFVHMPKDQARKQRIAENMEILRNKGIDV
AEVKCMEFPLSPYFLADRIPGVDKNISAKLFGLLRDKGFINVNGYMRNDGRATNWKKVLS
ESNIIFPDWDIFVHHIQEELNLAFAYHEMTSLQSEQIFNWFESHMT

Transcript Sequence

Transcript ID

VIT_12s0142g00260.t01
Transcript Infomation

cdna chromosome:12X:12:209962:212600:-1 gene:VIT_12s0142g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GATCTAGGGCCTTGGATATCTTTATCGGATCGACAATCCAGCAATGTTGAAGCACAGCAA
TAAATCATTGAAGCCATGGCACAGATCGCATAAATGTCCTGTGCCGGTTCTGATTGTACT
TCTGATTCTAATAATTGTAGTTTTAATGTTGTCATTTCACAACAATGGAAAACAGCCCAG
TTCTTCAATTGGAGTTATGACACAAAGCAGTGATCCTCTGGTCCAATTCCACCCCACCAT
AGAGTTCAGGAATGGAACAGATGTTATATGGCAAATACCCGATTCACCTAAGGCTGTTCT
CTTTCTGGCCCATGGGTGTAATGGCCAAGCGGTTAACTTTTGGGACAGATCCCCCAGCTG
TCCGGATTGTGTTGGTCTTCCTGAAGAAAGGTTAATAGTTCTTCACTCTCTCAATCGAAA
ATTTGCTGTTCTTACCATTTCAAGTGCTGGGAAATGCTGGTCATTTGGGAAGGAAAGTTT
AATTGTTAAAGGAATCATCCAATGGTGGATTGAGAAAAACAAGCTTGAAAAGCTTCCTCT
TGTGGCTTTGGGGGCCTCCTCTGGTGGGTACTTTGTTTCTGTGCTTGCCACTAATTTGAG
ATTTAGTAGTGTTACACTGATGATTGCTGAAGGGCTGTTTCATAAAATAGATATTATGAA
GGATTATCCACCCACCCTTTTTGTTCACATGCCCAAAGATCAAGCTAGGAAACAGAGAAT
AGCTGAAAATATGGAGATTTTGAGGAATAAAGGCATTGATGTTGCAGAGGTTAAATGCAT
GGAATTCCCCCTGTCGCCATACTTTTTGGCTGACAGAATCCCAGGTGTTGATAAGAACAT
TTCTGCCAAGTTGTTTGGGCTCTTGCGTGACAAGGGCTTTATCAATGTGAATGGATATAT
GAGGAACGATGGGCGTGCAACAAATTGGAAAAAAGTTCTCAGTGAGAGTAATATTATTTT
TCCAGATTGGGATATATTTGTCCACCACATTCAGGAAGAACTGAATCTGGCATTTGCATA
TCATGAAATGACAAGCTTGCAGTCAGAGCAGATTTTTAACTGGTTTGAATCTCATATGAC
TTGACCAGGACTCTCTCATGTCACATTCTTCCTTT