Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0142g00090.t01
CDS Infomation

cds chromosome:12X:12:73527:82662:1 gene:VIT_12s0142g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGAAGGGGTTCTGAGAGTGATGGAGAAGCCAAACGAGAAGCAAATACTCTTATTC
TATTGCATGGAGTCGGAGGACCTTGCTCGCAAAGTGGCTGAACAATCCCCCCTTATTCAG
CTTCAATCCATTAACTGGAGGAGTTTTGATGATGGATTCCCCAATCTATTCATAAACAAT
GCACAATATATCCGGGGCCAACATGTTGCCTTTTTGGCATCCTTCAGCTCTCCAGCAGTC
ATCTTTGAACAGCTTTCTGTCATATTTGCCCTTCCAAGACTGTTTGTTGCTTCGTTCACA
TTGGTTTTACCCTTCTTCCCAACTGGCTCCTTTGAGCGAATGGAAGAGGAAGGGGATGTA
GCTACTGCATTCACCATGGCAAGGATATTGTCAAATATTCCGATATCAAGGGGAGGTCCA
ACCAGTCTAGTCATCTATGATATACATGCTTTGCAGGAAAGATTTTATTTTAGTGACCAT
GTTTTGCCTCTATTTGAAACTGGGATTCCTCTGTTGAAGCAACGTCTTCACCAGCTTCCT
GATACTGACAATGTAGTTGTTGCATTTCCAGATGATGGAGCTTGGAAGCGATTCCACAAG
CAGTTGGATCATTTCCCGATGGTGGTGTGCGCTAAGGTCCGTGAAGGCGATAAGAGGATA
GTTCGACTTAAGGAGGGCAATCCTGCTGGCTGTCATGTAGTTATTGTTGATGATTTGGTG
CAATCAGGAGGCACCCTTATCGAGTGTCAGAAAGTTTTGGCAGCTCATGGTGCTTCCAAG
GTGAGTGCTTATGTCACTCATTCTGTGTTTCCTAAGCGATCCTGGGAGCGATTCATTCAC
AAAAACGATGGTTCGGAGAAGGCATTTACCTACTTTTGGACCACGGATTCTTGCCCTCTC
ACTGTGAAAGCAATAGGAAATAGAGCTCCTTTTGAGATTTTGAGTCTTGCAGGATCCATT
GCAGATGCTCTTCAAATCTGA

Peptide Sequence

PEP ID

VIT_12s0142g00090.t01
PEP Infomation

pep chromosome:12X:12:73527:82662:1 gene:VIT_12s0142g00090 transcript:VIT_12s0142g00090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEEGVLRVMEKPNEKQILLFYCMESEDLARKVAEQSPLIQLQSINWRSFDDGFPNLFINN
AQYIRGQHVAFLASFSSPAVIFEQLSVIFALPRLFVASFTLVLPFFPTGSFERMEEEGDV
ATAFTMARILSNIPISRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLP
DTDNVVVAFPDDGAWKRFHKQLDHFPMVVCAKVREGDKRIVRLKEGNPAGCHVVIVDDLV
QSGGTLIECQKVLAAHGASKVSAYVTHSVFPKRSWERFIHKNDGSEKAFTYFWTTDSCPL
TVKAIGNRAPFEILSLAGSIADALQI

Transcript Sequence

Transcript ID

VIT_12s0142g00090.t01
Transcript Infomation

cdna chromosome:12X:12:73527:82662:1 gene:VIT_12s0142g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCGAGGACGAAAGTATTCGGTCTCTGCTTTTACCCAGAAGCCTTCGATCATTCCTTCTCC
AAGCGCTGCGTTTACGTCGTTCCCCGAGTTCAAGGTTAGTTTGAGGAATGGAAGAAGGGG
TTCTGAGAGTGATGGAGAAGCCAAACGAGAAGCAAATACTCTTATTCTATTGCATGGAGT
CGGAGGACCTTGCTCGCAAAGTGGCTGAACAATCCCCCCTTATTCAGCTTCAATCCATTA
ACTGGAGGAGTTTTGATGATGGATTCCCCAATCTATTCATAAACAATGCACAATATATCC
GGGGCCAACATGTTGCCTTTTTGGCATCCTTCAGCTCTCCAGCAGTCATCTTTGAACAGC
TTTCTGTCATATTTGCCCTTCCAAGACTGTTTGTTGCTTCGTTCACATTGGTTTTACCCT
TCTTCCCAACTGGCTCCTTTGAGCGAATGGAAGAGGAAGGGGATGTAGCTACTGCATTCA
CCATGGCAAGGATATTGTCAAATATTCCGATATCAAGGGGAGGTCCAACCAGTCTAGTCA
TCTATGATATACATGCTTTGCAGGAAAGATTTTATTTTAGTGACCATGTTTTGCCTCTAT
TTGAAACTGGGATTCCTCTGTTGAAGCAACGTCTTCACCAGCTTCCTGATACTGACAATG
TAGTTGTTGCATTTCCAGATGATGGAGCTTGGAAGCGATTCCACAAGCAGTTGGATCATT
TCCCGATGGTGGTGTGCGCTAAGGTCCGTGAAGGCGATAAGAGGATAGTTCGACTTAAGG
AGGGCAATCCTGCTGGCTGTCATGTAGTTATTGTTGATGATTTGGTGCAATCAGGAGGCA
CCCTTATCGAGTGTCAGAAAGTTTTGGCAGCTCATGGTGCTTCCAAGGTGAGTGCTTATG
TCACTCATTCTGTGTTTCCTAAGCGATCCTGGGAGCGATTCATTCACAAAAACGATGGTT
CGGAGAAGGCATTTACCTACTTTTGGACCACGGATTCTTGCCCTCTCACTGTGAAAGCAA
TAGGAAATAGAGCTCCTTTTGAGATTTTGAGTCTTGCAGGATCCATTGCAGATGCTCTTC
AAATCTGAAATGCAATTTGATGGGGTTTCTATTCTGGAAGTCCCATAGTAAATTGCATGG
GGTTCAGATGCTAACAGGAAACCTGTAACTTAAAGAAGCCCTTTTCAGGGATCTTATCCT
TCAATAAA