Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g02390.t01
CDS Infomation

cds chromosome:12X:12:7174986:7176727:-1 gene:VIT_12s0059g02390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAACTGGATCTATCTCCGAAGTTGGCAAAGAAATTGTTTGGAGAGAATGGAGGATCA
TACTTTGCATGGTGCCCTTCAGAGCTTCCCATGCTACGTGAAGGCAACATTGGTGCTTCC
AAGCTTGCTCTTGAGAAGCATGGCTTTGCTCTTCCTCGCTATTCTGATTCCTCCAAGGTT
GCTTATGTTCTTCAAGGAAGTGGGGTTGCAGGAATTGTCCTTCCTGAGTCAGAGGAGAAG
GTGATTGCAATCAAGAAAGGCGACGCCATCGCCCTTCCTTTCGGTGTTGTAACATGGTGG
TACAACAAAGAGGACACTGAACTTGTAGTTCTCTTCCTGGGTGAAACCTCAAAAGCACAC
AAAGCAGGCGAATTCACCGATTTCTTTCTCACAGGCACAACTGGCCTAATGACTGGTTTT
ACAACTGAGTTTGTGGCCAGGGCATGGGACTTGGAAGAAAAAGTAGCTAAACTCCTCGTT
GAGAAGCAATCAGGGGTTGGCATTGTCAAGCTTGCTGACACTTTCAAGATGCCTGAGCCC
AAAATCGAACACCGAAACGGTATGGCATTGAACTGTGAGGAAGCTCCATTGGATATTGAT
ATCAAGAATGGTGGAAGAGTTGTGGTTCTGAATACCAAGAACTTGCCTCTGGTTGGTGAG
GTTGGGCTTGGTGCTGATCTTGTTAGACTTGATGGGGGTGCCATGTGCTCTCCTGGCTTC
TCCTGTGACTCGGCCCTGCAGGTGACTTATGTCGTCCGAGGCAGTGGCCGAGTTCAGGTT
GTAGGGGTTGATGGGAAGAGGGTCCTGGAGACCACCCTAAAGGCTGGCAATCTGTTCATT
GTACCAAGGTTTTTCGTGGTTTCGAAGATAGCTGATCCTGATGGAATGGAGTGGTTCTCC
ATCATCTCCACCCCCAATCCAATATTCACCAATTTAGCTGGAAAAACTGGAGTTTGGAAG
GCCCTTTCTCCTCAAGTGCTGGAGGCTGCCTTCAATATTCCCCCTGATGCAGAGAAACAG
TTCCGGTCCAAGAGGAATTCTGATGCTGTCTTCTTCCCCCCACCAAATTAA

Peptide Sequence

PEP ID

VIT_12s0059g02390.t01
PEP Infomation

pep chromosome:12X:12:7174986:7176727:-1 gene:VIT_12s0059g02390 transcript:VIT_12s0059g02390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MELDLSPKLAKKLFGENGGSYFAWCPSELPMLREGNIGASKLALEKHGFALPRYSDSSKV
AYVLQGSGVAGIVLPESEEKVIAIKKGDAIALPFGVVTWWYNKEDTELVVLFLGETSKAH
KAGEFTDFFLTGTTGLMTGFTTEFVARAWDLEEKVAKLLVEKQSGVGIVKLADTFKMPEP
KIEHRNGMALNCEEAPLDIDIKNGGRVVVLNTKNLPLVGEVGLGADLVRLDGGAMCSPGF
SCDSALQVTYVVRGSGRVQVVGVDGKRVLETTLKAGNLFIVPRFFVVSKIADPDGMEWFS
IISTPNPIFTNLAGKTGVWKALSPQVLEAAFNIPPDAEKQFRSKRNSDAVFFPPPN

Transcript Sequence

Transcript ID

VIT_12s0059g02390.t01
Transcript Infomation

cdna chromosome:12X:12:7174986:7176727:-1 gene:VIT_12s0059g02390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAAAATGGAACTGGATCTATCTCCGAAGTTGGCAAAGAAATTGTTTGGAGAGAATGGAG
GATCATACTTTGCATGGTGCCCTTCAGAGCTTCCCATGCTACGTGAAGGCAACATTGGTG
CTTCCAAGCTTGCTCTTGAGAAGCATGGCTTTGCTCTTCCTCGCTATTCTGATTCCTCCA
AGGTTGCTTATGTTCTTCAAGGAAGTGGGGTTGCAGGAATTGTCCTTCCTGAGTCAGAGG
AGAAGGTGATTGCAATCAAGAAAGGCGACGCCATCGCCCTTCCTTTCGGTGTTGTAACAT
GGTGGTACAACAAAGAGGACACTGAACTTGTAGTTCTCTTCCTGGGTGAAACCTCAAAAG
CACACAAAGCAGGCGAATTCACCGATTTCTTTCTCACAGGCACAACTGGCCTAATGACTG
GTTTTACAACTGAGTTTGTGGCCAGGGCATGGGACTTGGAAGAAAAAGTAGCTAAACTCC
TCGTTGAGAAGCAATCAGGGGTTGGCATTGTCAAGCTTGCTGACACTTTCAAGATGCCTG
AGCCCAAAATCGAACACCGAAACGGTATGGCATTGAACTGTGAGGAAGCTCCATTGGATA
TTGATATCAAGAATGGTGGAAGAGTTGTGGTTCTGAATACCAAGAACTTGCCTCTGGTTG
GTGAGGTTGGGCTTGGTGCTGATCTTGTTAGACTTGATGGGGGTGCCATGTGCTCTCCTG
GCTTCTCCTGTGACTCGGCCCTGCAGGTGACTTATGTCGTCCGAGGCAGTGGCCGAGTTC
AGGTTGTAGGGGTTGATGGGAAGAGGGTCCTGGAGACCACCCTAAAGGCTGGCAATCTGT
TCATTGTACCAAGGTTTTTCGTGGTTTCGAAGATAGCTGATCCTGATGGAATGGAGTGGT
TCTCCATCATCTCCACCCCCAATCCAATATTCACCAATTTAGCTGGAAAAACTGGAGTTT
GGAAGGCCCTTTCTCCTCAAGTGCTGGAGGCTGCCTTCAATATTCCCCCTGATGCAGAGA
AACAGTTCCGGTCCAAGAGGAATTCTGATGCTGTCTTCTTCCCCCCACCAAATTAAGGAT
ATCAGCCTTCTGAAGTCACTTAAAATAAATTTAGGGTATTGGTTTAATATTGGTATCTAC
TTGGTTTCAAGTAGGGTTTATATATGTATGGAGATGAAGTTGATGGTATTTTATTTTTGA
TATTTGGTAATAGAAATAATGCGACTCTTCATTTTTGCTGTAAATCCGACATTGAAGTTT
AATATTGAAGATATTAAGAGACATTAAAGTCTTCCATTCTTAGATCATATAGATAATTAT
ACTCCTAGTGAAATAGCAGGATGATTTTGGAA