Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g02380.t01
CDS Infomation

cds chromosome:12X:12:7166525:7169701:1 gene:VIT_12s0059g02380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCATTGAGGGGGAAATTGTGGCATTGTTTTTTGGATGAAGCTAGTGGCTTTGCCATG
TATGCCAGATTTTATAGCGTGAAAGTGGACTTGAAAAAGCTCAGGCCAATGATTCTCAAG
AGAATTGAGAATCGAGCTAAGGAGTATCCCATTAGCAGCATGATTCCGGTTGCGCAGGAT
GTGCTCAAGGCACGGTCTCTGCTCATCCAAGGCGTGTCTACCCTCATGAATGTTTTTCCT
GTCATGGCCTGCAAGTTCTGTCCAGAAGTATATATTGGTGAGCAAGGTCACTTGATTCAG
ACTTGCTATGGTTACAAGCGCCGTTCCAAGAACCAGGTTCATGAATGGATAAGTGGTAGC
TTGAATGATATACTAGTCCCAGTAGAAACATTTCACCTACAGAAAATGTTCCAAGATGTA
ATCAAGCACCACCAAAGATTTGATTTTGACCGTGTTCCTGCAGTATTTGAACTATGCCTA
CAAGCAGGGGCTGATCTAGATGAAGAAAATTTGAGTTCCAGCAGTTGGAAATCTGAAAGC
ACCTTTAGTGGTGTCCATGGAACCAAGTCTTTGTCACCAGATGAACTGAAGTTCGTAGCC
ACTGGAACTTTGAGGGCATGGGAGGTGCTTAGATCTGGCATTCGGAGGCTGCTGCTGGTT
TACCCTGCAAAGGTTTGTAAGTACTGTTCAGAAGTTCATGTGGGACCATCTGGGCACAAA
GCTAGGCTTTGTGGGGTATTTAAGTATGAAAGTTGGCGGGGTGCCCATTTCTGGAAGAAG
GCGGATGTAGATGATTTGGTGCCTCCTAAGATTGTGTGGCGACAGAGGCCTCAGGATCCT
CCTGTGCTTGTGAATGAAGGGCGGGATTTTTATGGACATGCACCTGCAGTGGTGGATCTG
TGTACAAAGGCTGGTGCTATTGCACCAGCCAGGTATCACTCTATGATGAAAGTGCAAGGT
CTGCCAGGACCTACTGGGGTCAAGTCCTGA

Peptide Sequence

PEP ID

VIT_12s0059g02380.t01
PEP Infomation

pep chromosome:12X:12:7166525:7169701:1 gene:VIT_12s0059g02380 transcript:VIT_12s0059g02380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALRGKLWHCFLDEASGFAMYARFYSVKVDLKKLRPMILKRIENRAKEYPISSMIPVAQD
VLKARSLLIQGVSTLMNVFPVMACKFCPEVYIGEQGHLIQTCYGYKRRSKNQVHEWISGS
LNDILVPVETFHLQKMFQDVIKHHQRFDFDRVPAVFELCLQAGADLDEENLSSSSWKSES
TFSGVHGTKSLSPDELKFVATGTLRAWEVLRSGIRRLLLVYPAKVCKYCSEVHVGPSGHK
ARLCGVFKYESWRGAHFWKKADVDDLVPPKIVWRQRPQDPPVLVNEGRDFYGHAPAVVDL
CTKAGAIAPARYHSMMKVQGLPGPTGVKS

Transcript Sequence

Transcript ID

VIT_12s0059g02380.t01
Transcript Infomation

cdna chromosome:12X:12:7166525:7169701:1 gene:VIT_12s0059g02380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGGAATTTTCTCTATTCTCCATTGCTCGTTAATTGTTTGATGTAATGTCTCAAAGAGAA
CCCTCTTTACATTTTCAGTTTTCGATTCTATAACAGCACCAGGAGAGAGCTCAGAGTTGT
GTTTGCTGCTGTTGTGATGGCATTGAGGGGGAAATTGTGGCATTGTTTTTTGGATGAAGC
TAGTGGCTTTGCCATGTATGCCAGATTTTATAGCGTGAAAGTGGACTTGAAAAAGCTCAG
GCCAATGATTCTCAAGAGAATTGAGAATCGAGCTAAGGAGTATCCCATTAGCAGCATGAT
TCCGGTTGCGCAGGATGTGCTCAAGGCACGGTCTCTGCTCATCCAAGGCGTGTCTACCCT
CATGAATGTTTTTCCTGTCATGGCCTGCAAGTTCTGTCCAGAAGTATATATTGGTGAGCA
AGGTCACTTGATTCAGACTTGCTATGGTTACAAGCGCCGTTCCAAGAACCAGGTTCATGA
ATGGATAAGTGGTAGCTTGAATGATATACTAGTCCCAGTAGAAACATTTCACCTACAGAA
AATGTTCCAAGATGTAATCAAGCACCACCAAAGATTTGATTTTGACCGTGTTCCTGCAGT
ATTTGAACTATGCCTACAAGCAGGGGCTGATCTAGATGAAGAAAATTTGAGTTCCAGCAG
TTGGAAATCTGAAAGCACCTTTAGTGGTGTCCATGGAACCAAGTCTTTGTCACCAGATGA
ACTGAAGTTCGTAGCCACTGGAACTTTGAGGGCATGGGAGGTGCTTAGATCTGGCATTCG
GAGGCTGCTGCTGGTTTACCCTGCAAAGGTTTGTAAGTACTGTTCAGAAGTTCATGTGGG
ACCATCTGGGCACAAAGCTAGGCTTTGTGGGGTATTTAAGTATGAAAGTTGGCGGGGTGC
CCATTTCTGGAAGAAGGCGGATGTAGATGATTTGGTGCCTCCTAAGATTGTGTGGCGACA
GAGGCCTCAGGATCCTCCTGTGCTTGTGAATGAAGGGCGGGATTTTTATGGACATGCACC
TGCAGTGGTGGATCTGTGTACAAAGGCTGGTGCTATTGCACCAGCCAGGTATCACTCTAT
GATGAAAGTGCAAGGTCTGCCAGGACCTACTGGGGTCAAGTCCTGAAGCTCTCAGTTGCT
TCATTTCCAGAAGTGTGGACTTCAGGGCCCTTCATCTGGTGCATCTTGGGGCTGGAATTT
TTACAG