Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g01870.t01
CDS Infomation

cds chromosome:12X:12:6726733:6729340:1 gene:VIT_12s0059g01870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAATCAGCTGCTGGTGCTGAGAGCAATGGAGAGCATGAAATCATCGGTTGGTTCGAG
GACGTATCAGAGAATACGGGCTATGTCCAGACTCAGACGCTTTGCCGGATTCTTGAACTG
AATTCTGGTGTGGAGTATCTCAAGAAATGGCTGGGGGACATCAATGTCCAAGAGATGGAG
GCAAGTGCATTGGAATCTCTTTACACCTCTTTAGTCCCCCTTGCCTCCCATGCAGATTTG
GAGACTTATATTCAGAGAATTGCAGATGGGGACACCTCTCCCATTCTCACTAACCAGCCT
ATAACCACTCTCTCCTTGAGTTCTGGAACCACAGAGGGAAGACAGAAGTATGTCCCCTTT
ACTCGCCATAGCTCACAGACTACTCTTCAGATTTTTCAGTTAGCGGCAGCTTACAGATCA
AGAGTTTATCCGATAACGCCGGGAAGAAGGATCCTCGAATTCATATACAGCAGCAAACAA
TTCAAAACAAAGGGAGGCTTAATAGCAGGAACAGCCACAACACACTATTTTGCCAGTGAA
GAATTTAAAATCAAACAGGAGAAGACAAAGTCATTCACTTGCAGCCCAGAAGAAGTAATC
TCAAGTGGAGACTACAAACAATCCACATATTGCCATCTCCTCCTTGGCCTCCATTTCCAT
GATGAAGTGGAGTTCATAACTTCCACTTTTGCTTATAGCATAGTTCAGGCATTCAGAACT
TTTGAAGAGCTATGGAGAAACATATGTAGTGACATCAGAGAAGGCATTGTCAGCTCAAGA
ATCAGCCTGCCCAAGGTGAGAAAAGCCGTCTCCGATATCATATCACCAAACCCGGGTTTG
GCATCATGGATTGAAGCAAGTTGCAAGGAGTTAGAAGATAAAGACTGGTTTGGCCTAATT
CCTAAGCTTTGGCCAAATGCTAAGTATGTGTATTCCATAATGACGGGATCAATGCAACCA
TATTTGAAAAAGCTAAGGCATTATGCTGGGGACTTGCCTTTAGTGAGTGCTGATTATGGA
TCAACCGAGAGTTGGATTGGAGCGAATATAGATCCTTCTTCTCCTCCAGAGAATGTGACT
TTTGCAGTGATACCCACTTTTTCTTACTTCGAGTTCATACCACTTTATAGACAGAACCAA
AATTGTAGTTCCTCCATTGATGACTTCATAGAAGATGAACCAGTACCACTCTCTCAAGTC
AAGATTGGACAGGAGTACGAGATCGTCCTCACAACTTTTACTGGTCTGTACAGGTACAGA
TTAGGAGATGTAGTTGAAGTGGCTGGCTTCCACAAAGGGACCCCCAAACTGAACTTTATA
TGCAGGAGAAAGCTTATCTTAACTGTTAATATAGACAAAAATACTGAAAAGGATCTTCAG
TCTGTGGTGGAGGTGGGCTCCCAACTACTGGGCAAGACCAAAGCCGAGCTAGTCGATTTC
ACAAGCCATGCAGATTTGGTGAAGCAACCTGGTCATTACATAATTTACTGGGAAATCAAA
GGAGAAGCCGACGACAAGGTACTTAGCGAATGCTGCAATGAAATGGACGCGTGTTTTGTC
GATCAAGGCTACATTGTATCGAGGAAAACCCACTCAATTGGACCTCTAGAGCTTTGCATT
GTAGAGAGAGGAACTTTCAAGAAAATTCTGGATCATTTCATAGGCAAGGGTGCGGCATTG
AGCCAGTTCAAGACCCCAAGATGCACTGCTGATGAGGTCCTCCTAAGAATTCTCAATGTC
TGCACCATTAAAAGGTTTCACAGCACAGCCTATGGATGA

Peptide Sequence

PEP ID

VIT_12s0059g01870.t01
PEP Infomation

pep chromosome:12X:12:6726733:6729340:1 gene:VIT_12s0059g01870 transcript:VIT_12s0059g01870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESAAGAESNGEHEIIGWFEDVSENTGYVQTQTLCRILELNSGVEYLKKWLGDINVQEME
ASALESLYTSLVPLASHADLETYIQRIADGDTSPILTNQPITTLSLSSGTTEGRQKYVPF
TRHSSQTTLQIFQLAAAYRSRVYPITPGRRILEFIYSSKQFKTKGGLIAGTATTHYFASE
EFKIKQEKTKSFTCSPEEVISSGDYKQSTYCHLLLGLHFHDEVEFITSTFAYSIVQAFRT
FEELWRNICSDIREGIVSSRISLPKVRKAVSDIISPNPGLASWIEASCKELEDKDWFGLI
PKLWPNAKYVYSIMTGSMQPYLKKLRHYAGDLPLVSADYGSTESWIGANIDPSSPPENVT
FAVIPTFSYFEFIPLYRQNQNCSSSIDDFIEDEPVPLSQVKIGQEYEIVLTTFTGLYRYR
LGDVVEVAGFHKGTPKLNFICRRKLILTVNIDKNTEKDLQSVVEVGSQLLGKTKAELVDF
TSHADLVKQPGHYIIYWEIKGEADDKVLSECCNEMDACFVDQGYIVSRKTHSIGPLELCI
VERGTFKKILDHFIGKGAALSQFKTPRCTADEVLLRILNVCTIKRFHSTAYG

Transcript Sequence

Transcript ID

VIT_12s0059g01870.t01
Transcript Infomation

cdna chromosome:12X:12:6726733:6729340:1 gene:VIT_12s0059g01870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAATCAGCTGCTGGTGCTGAGAGCAATGGAGAGCATGAAATCATCGGTTGGTTCGAG
GACGTATCAGAGAATACGGGCTATGTCCAGACTCAGACGCTTTGCCGGATTCTTGAACTG
AATTCTGGTGTGGAGTATCTCAAGAAATGGCTGGGGGACATCAATGTCCAAGAGATGGAG
GCAAGTGCATTGGAATCTCTTTACACCTCTTTAGTCCCCCTTGCCTCCCATGCAGATTTG
GAGACTTATATTCAGAGAATTGCAGATGGGGACACCTCTCCCATTCTCACTAACCAGCCT
ATAACCACTCTCTCCTTGAGTTCTGGAACCACAGAGGGAAGACAGAAGTATGTCCCCTTT
ACTCGCCATAGCTCACAGACTACTCTTCAGATTTTTCAGTTAGCGGCAGCTTACAGATCA
AGAGTTTATCCGATAACGCCGGGAAGAAGGATCCTCGAATTCATATACAGCAGCAAACAA
TTCAAAACAAAGGGAGGCTTAATAGCAGGAACAGCCACAACACACTATTTTGCCAGTGAA
GAATTTAAAATCAAACAGGAGAAGACAAAGTCATTCACTTGCAGCCCAGAAGAAGTAATC
TCAAGTGGAGACTACAAACAATCCACATATTGCCATCTCCTCCTTGGCCTCCATTTCCAT
GATGAAGTGGAGTTCATAACTTCCACTTTTGCTTATAGCATAGTTCAGGCATTCAGAACT
TTTGAAGAGCTATGGAGAAACATATGTAGTGACATCAGAGAAGGCATTGTCAGCTCAAGA
ATCAGCCTGCCCAAGGTGAGAAAAGCCGTCTCCGATATCATATCACCAAACCCGGGTTTG
GCATCATGGATTGAAGCAAGTTGCAAGGAGTTAGAAGATAAAGACTGGTTTGGCCTAATT
CCTAAGCTTTGGCCAAATGCTAAGTATGTGTATTCCATAATGACGGGATCAATGCAACCA
TATTTGAAAAAGCTAAGGCATTATGCTGGGGACTTGCCTTTAGTGAGTGCTGATTATGGA
TCAACCGAGAGTTGGATTGGAGCGAATATAGATCCTTCTTCTCCTCCAGAGAATGTGACT
TTTGCAGTGATACCCACTTTTTCTTACTTCGAGTTCATACCACTTTATAGACAGAACCAA
AATTGTAGTTCCTCCATTGATGACTTCATAGAAGATGAACCAGTACCACTCTCTCAAGTC
AAGATTGGACAGGAGTACGAGATCGTCCTCACAACTTTTACTGGTCTGTACAGGTACAGA
TTAGGAGATGTAGTTGAAGTGGCTGGCTTCCACAAAGGGACCCCCAAACTGAACTTTATA
TGCAGGAGAAAGCTTATCTTAACTGTTAATATAGACAAAAATACTGAAAAGGATCTTCAG
TCTGTGGTGGAGGTGGGCTCCCAACTACTGGGCAAGACCAAAGCCGAGCTAGTCGATTTC
ACAAGCCATGCAGATTTGGTGAAGCAACCTGGTCATTACATAATTTACTGGGAAATCAAA
GGAGAAGCCGACGACAAGGTACTTAGCGAATGCTGCAATGAAATGGACGCGTGTTTTGTC
GATCAAGGCTACATTGTATCGAGGAAAACCCACTCAATTGGACCTCTAGAGCTTTGCATT
GTAGAGAGAGGAACTTTCAAGAAAATTCTGGATCATTTCATAGGCAAGGGTGCGGCATTG
AGCCAGTTCAAGACCCCAAGATGCACTGCTGATGAGGTCCTCCTAAGAATTCTCAATGTC
TGCACCATTAAAAGGTTTCACAGCACAGCCTATGGATGAAACCAGAAAAA