Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g01790.t01
CDS Infomation

cds chromosome:12X:12:6643777:6645063:1 gene:VIT_12s0059g01790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGAGCAGAAGTGAAAACGACGACGTTTTGAAGATCTCACGTGAGGCTGATGAAGCA
GAGCTCATGCTACAAGGCCAAGCAAATATATGGCGTCACATGTTCGCCTTTGCAGATTCC
ATGGTGCTGAAATGTGCTTTGGAGCTCCGCATAGCCGATATCATACACTCTCACGCCCGC
CCAATCACCTTGTCCCAAATCGCCACCTGTATCGACTCACCGTCTCCGGATATCACCTGC
CTCGCCCGCATCATGAGATTCCTGGTCTGCGCCAAGATCTTCACCGCCGCTCCTCCTCCT
CAGTCAGATGGCGGAGAAACTCTCTACGGCCTCACCCCCTCCTCCAAATGGCTCCTCCAC
GACGCCGAGCTGAGCCTCGCGCCGATGGTGCTCATGGAGAACCACCCCTTTCTCATGGCT
CCCTGGCACTGCTTGGGGACGTGCGTCAAAGAAGGTGGCATAGCCTTCGAGAAGGCTCAC
GGCCGCCAGATTTGGGACTTCGCATCGGAAAATCCCGAATTCAACAAGCTCTTCAATGAC
GGTATGGCGTGTACGGCTAAGGTCGTCATGGGGGAGGTGGTAGCAGCGTATAAAGATGGG
TTCGGCAGCATTAGAACACTGGTGGACGTGGGAGGTGGCACCGGAGGGGCGGTGGCGGAG
GTGGTGAAGGCGTATCCGCACATCAAGGGCATTAACTTCGACCTCCCACATGTGGTGGCC
TCAGCGCCGGCGTACGAAGGAGTGTCCCACGTCGGGGGCGACATGTTCGAGTCCATCCCT
AACGCTGATGCAATCTTCATGAAGTGGATAATGCACGATTGGAGTGACGAAGACTGCATA
AAAATCTTAAAAAATTGTCGGAAAGCAGTACCGGAGAAAACAGGGAAAATTATTATCGTC
GATGGAGTGATACGAGAAGATAGCGATGACCCATTTGATAAAACAAGGTTGGTGTTCGAT
TTACTGATGATCGCGCATAGCTCCAACGGGAAAGAGAGAAGCGAGGTGGAATGGAAGAAA
GTATTAGAGGAAGGAGGATTTCCTCGCTACAGAATCCTGGAGATTTCGATCTCCACTTTA
CCAATGATAATTGAGGCATATCCAGAGTAA

Peptide Sequence

PEP ID

VIT_12s0059g01790.t01
PEP Infomation

pep chromosome:12X:12:6643777:6645063:1 gene:VIT_12s0059g01790 transcript:VIT_12s0059g01790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVSRSENDDVLKISREADEAELMLQGQANIWRHMFAFADSMVLKCALELRIADIIHSHAR
PITLSQIATCIDSPSPDITCLARIMRFLVCAKIFTAAPPPQSDGGETLYGLTPSSKWLLH
DAELSLAPMVLMENHPFLMAPWHCLGTCVKEGGIAFEKAHGRQIWDFASENPEFNKLFND
GMACTAKVVMGEVVAAYKDGFGSIRTLVDVGGGTGGAVAEVVKAYPHIKGINFDLPHVVA
SAPAYEGVSHVGGDMFESIPNADAIFMKWIMHDWSDEDCIKILKNCRKAVPEKTGKIIIV
DGVIREDSDDPFDKTRLVFDLLMIAHSSNGKERSEVEWKKVLEEGGFPRYRILEISISTL
PMIIEAYPE

Transcript Sequence

Transcript ID

VIT_12s0059g01790.t01
Transcript Infomation

cdna chromosome:12X:12:6643777:6645063:1 gene:VIT_12s0059g01790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGAAGCAGAAAATGGTGAGCAGAAGTGAAAACGACGACGTTTTGAAGATCTCACGTGAG
GCTGATGAAGCAGAGCTCATGCTACAAGGCCAAGCAAATATATGGCGTCACATGTTCGCC
TTTGCAGATTCCATGGTGCTGAAATGTGCTTTGGAGCTCCGCATAGCCGATATCATACAC
TCTCACGCCCGCCCAATCACCTTGTCCCAAATCGCCACCTGTATCGACTCACCGTCTCCG
GATATCACCTGCCTCGCCCGCATCATGAGATTCCTGGTCTGCGCCAAGATCTTCACCGCC
GCTCCTCCTCCTCAGTCAGATGGCGGAGAAACTCTCTACGGCCTCACCCCCTCCTCCAAA
TGGCTCCTCCACGACGCCGAGCTGAGCCTCGCGCCGATGGTGCTCATGGAGAACCACCCC
TTTCTCATGGCTCCCTGGCACTGCTTGGGGACGTGCGTCAAAGAAGGTGGCATAGCCTTC
GAGAAGGCTCACGGCCGCCAGATTTGGGACTTCGCATCGGAAAATCCCGAATTCAACAAG
CTCTTCAATGACGGTATGGCGTGTACGGCTAAGGTCGTCATGGGGGAGGTGGTAGCAGCG
TATAAAGATGGGTTCGGCAGCATTAGAACACTGGTGGACGTGGGAGGTGGCACCGGAGGG
GCGGTGGCGGAGGTGGTGAAGGCGTATCCGCACATCAAGGGCATTAACTTCGACCTCCCA
CATGTGGTGGCCTCAGCGCCGGCGTACGAAGGAGTGTCCCACGTCGGGGGCGACATGTTC
GAGTCCATCCCTAACGCTGATGCAATCTTCATGAAGTGGATAATGCACGATTGGAGTGAC
GAAGACTGCATAAAAATCTTAAAAAATTGTCGGAAAGCAGTACCGGAGAAAACAGGGAAA
ATTATTATCGTCGATGGAGTGATACGAGAAGATAGCGATGACCCATTTGATAAAACAAGG
TTGGTGTTCGATTTACTGATGATCGCGCATAGCTCCAACGGGAAAGAGAGAAGCGAGGTG
GAATGGAAGAAAGTATTAGAGGAAGGAGGATTTCCTCGCTACAGAATCCTGGAGATTTCG
ATCTCCACTTTACCAATGATAATTGAGGCATATCCAGAGTAATCATCTCATGCTAGTCAG
GTCATGTTTGTTTGTTTATTTTATATTTGGATTGTAGTGTATGTCATGGTACCCAAAATC
ATTTTCATAT