Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g01680.t01
CDS Infomation

cds chromosome:12X:12:6578889:6585318:-1 gene:VIT_12s0059g01680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGCCCTCCGTTTTGGTGATCTTCATAGCCTTTCTTCTCTTTACTCCCTCACAAGCC
CACCTCAAATCCACAGAATCATCATTCATATCCATTCTCATATCCTCCCAAGGCCTTGAT
TTCATCAAAAACTTGCTCATCACCAAGGCGATTTCTTCACTCACACCCCTCCAACTCCCC
CAGATTAAAAAATCTGTGAAAATCCCATTTTTGGGTCGCGTTGATATTGCCTTTTCCAAC
ATCACAATATATCATATTGATGTTTCCTCATCGAATATTGCACCGGGCGATACTGGTGTT
GCTATTATTGCCTCAGGCACCACTTGTAATTTGAGCATGAATTGGCATTATTCTTATAAT
ACTTGGTTCGTGCCCGTCGAAATTTCGGATAGTGGGACCGCCCAAGTTCAGGTTGAAGGC
ATGGAAGTGGGGCTTACTCTAGGCTTGGAGAACAGAGAAGGAAGTATGAAGCTGTCCGCT
AAGGACTGTGGTTGTTATGTTGAAGATATTTCTATAAAATTGGATGGAGGAGCATCTTGG
CTTTACCAAGGGGTGGTGGATGCTTTTGAAGAGCAAATAGGTTCGGCAGTGGAAAGTACC
ATTACTAAGAAACTTAAAGAAGGAATCATAAAGCTTGATTCCTTTCTGCAGGCTCTTCCA
AAGGAAATCCCAGTGGACAATATTGCTTCTCTGAATGTGACTTTTGTGAATGATCCTTTA
TTGAGTAATTCTTCAATTGGGTTTGACATCAATGGGTTATTCACCAGAGCAAACGCTACT
ACCCTTCCCAAATACTATCAAAATTCAAGACATCCAGTTTCTTGCACAGACCCATCTAAA
ATGCTTGGAATTTCATTGGACGAGGCTGTTCTTAACTCTGCATCTGCCTTATATTTCAAT
GCAGAGTTTATGCAGTGGATTGTGGACAAAGTACCTGATCAGTCTCTTTTAAACACTGCT
GGCTGGAGATTTATTGTTCCTCAACTGTACAAGAAATACCCAAACGATGATATGAATATG
AATATTTCTTTATCTACTCCTCCAGTGATAAAGATTTCCCCGAATAATGTTGATGCTATC
GTCTATGCAGACTTGATAATCGATGTTTTGGAATCTCAGGAAGTAATACCAGTTGCATGC
ATTTCATTGGTAATTCATGCCTCAGGGTCAGTAAAAATCGCAGGGAATAACCTTGCTGGA
AGTGTGAAATTGAATGACTTCACAATGTCATTAAAGTGGAGCAAAATTGGTAACTTGCGC
ATGTTTCTAATTCAGCCAGTAATATGGACTCTCATCGAAACTGTCTTCTTGCCATACGTG
AACGTCCACTTGGGGAAAGGATTCCCTCTGCCTATCATTCATGGATTCACCCTTCAGAAT
GCTGAAATAATCTGCTCCTACTCAAAAATTACAGTCTGCAGCAATGTTGCATATGAAGAC
CCACAGAATCTTAATCAGCTGCCATTTCACTCATACAGAAATACTGTTATGCTGTGA

Peptide Sequence

PEP ID

VIT_12s0059g01680.t01
PEP Infomation

pep chromosome:12X:12:6578889:6585318:-1 gene:VIT_12s0059g01680 transcript:VIT_12s0059g01680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRPSVLVIFIAFLLFTPSQAHLKSTESSFISILISSQGLDFIKNLLITKAISSLTPLQLP
QIKKSVKIPFLGRVDIAFSNITIYHIDVSSSNIAPGDTGVAIIASGTTCNLSMNWHYSYN
TWFVPVEISDSGTAQVQVEGMEVGLTLGLENREGSMKLSAKDCGCYVEDISIKLDGGASW
LYQGVVDAFEEQIGSAVESTITKKLKEGIIKLDSFLQALPKEIPVDNIASLNVTFVNDPL
LSNSSIGFDINGLFTRANATTLPKYYQNSRHPVSCTDPSKMLGISLDEAVLNSASALYFN
AEFMQWIVDKVPDQSLLNTAGWRFIVPQLYKKYPNDDMNMNISLSTPPVIKISPNNVDAI
VYADLIIDVLESQEVIPVACISLVIHASGSVKIAGNNLAGSVKLNDFTMSLKWSKIGNLR
MFLIQPVIWTLIETVFLPYVNVHLGKGFPLPIIHGFTLQNAEIICSYSKITVCSNVAYED
PQNLNQLPFHSYRNTVML

Transcript Sequence

Transcript ID

VIT_12s0059g01680.t01
Transcript Infomation

cdna chromosome:12X:12:6578889:6585318:-1 gene:VIT_12s0059g01680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGCCCTCCGTTTTGGTGATCTTCATAGCCTTTCTTCTCTTTACTCCCTCACAAGCC
CACCTCAAATCCACAGAATCATCATTCATATCCATTCTCATATCCTCCCAAGGCCTTGAT
TTCATCAAAAACTTGCTCATCACCAAGGCGATTTCTTCACTCACACCCCTCCAACTCCCC
CAGATTAAAAAATCTGTGAAAATCCCATTTTTGGGTCGCGTTGATATTGCCTTTTCCAAC
ATCACAATATATCATATTGATGTTTCCTCATCGAATATTGCACCGGGCGATACTGGTGTT
GCTATTATTGCCTCAGGCACCACTTGTAATTTGAGCATGAATTGGCATTATTCTTATAAT
ACTTGGTTCGTGCCCGTCGAAATTTCGGATAGTGGGACCGCCCAAGTTCAGGTTGAAGGC
ATGGAAGTGGGGCTTACTCTAGGCTTGGAGAACAGAGAAGGAAGTATGAAGCTGTCCGCT
AAGGACTGTGGTTGTTATGTTGAAGATATTTCTATAAAATTGGATGGAGGAGCATCTTGG
CTTTACCAAGGGGTGGTGGATGCTTTTGAAGAGCAAATAGGTTCGGCAGTGGAAAGTACC
ATTACTAAGAAACTTAAAGAAGGAATCATAAAGCTTGATTCCTTTCTGCAGGCTCTTCCA
AAGGAAATCCCAGTGGACAATATTGCTTCTCTGAATGTGACTTTTGTGAATGATCCTTTA
TTGAGTAATTCTTCAATTGGGTTTGACATCAATGGGTTATTCACCAGAGCAAACGCTACT
ACCCTTCCCAAATACTATCAAAATTCAAGACATCCAGTTTCTTGCACAGACCCATCTAAA
ATGCTTGGAATTTCATTGGACGAGGCTGTTCTTAACTCTGCATCTGCCTTATATTTCAAT
GCAGAGTTTATGCAGTGGATTGTGGACAAAGTACCTGATCAGTCTCTTTTAAACACTGCT
GGCTGGAGATTTATTGTTCCTCAACTGTACAAGAAATACCCAAACGATGATATGAATATG
AATATTTCTTTATCTACTCCTCCAGTGATAAAGATTTCCCCGAATAATGTTGATGCTATC
GTCTATGCAGACTTGATAATCGATGTTTTGGAATCTCAGGAAGTAATACCAGTTGCATGC
ATTTCATTGGTAATTCATGCCTCAGGGTCAGTAAAAATCGCAGGGAATAACCTTGCTGGA
AGTGTGAAATTGAATGACTTCACAATGTCATTAAAGTGGAGCAAAATTGGTAACTTGCGC
ATGTTTCTAATTCAGCCAGTAATATGGACTCTCATCGAAACTGTCTTCTTGCCATACGTG
AACGTCCACTTGGGGAAAGGATTCCCTCTGCCTATCATTCATGGATTCACCCTTCAGAAT
GCTGAAATAATCTGCTCCTACTCAAAAATTACAGTCTGCAGCAATGTTGCATATGAAGAC
CCACAGAATCTTAATCAGCTGCCATTTCACTCATACAGAAATACTGTTATGCTGTGAGAG
CTGTTCTAGGAAAAGTGGTAGGGATAGGAAAAGGAAACAAACATACAAACAGACATGGGT
TTCTCCTCTTTGTACAATGTGGTGCCACGTACAGGGTTTCTGGGGCAACCCTTCTACCAC
AACAAATGATGAATAGGCAATGTAACATACAACACAATGTTCCATGAGCAGCTTCTGCTC
CTGTTCCTGTTCCTCCCCCTCACTGTGTGCCTACTTCTTCCCTTCTCAATGTATTTTACA
TAAATTTAATTAAATGTAAATGAA