Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g01600.t01
CDS Infomation

cds chromosome:12X:12:6519198:6524165:1 gene:VIT_12s0059g01600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCTAAAGATAGTGAACTAAGGGTCTTCATAGTTTCAGGAGAGGTTTCTGGAGAC
ACAATAGGTTCTCGTCTCATGGCTTCTTTAAAAGGGATTTCCCCCTTTCCTATTCGTTTT
GCTGGTGTTGGAGGGCCCATGATGTCCAAGCAAGGATTGAAACCTCTTTTCCCTATGGAA
GATATTGCAGTAATGGGGATCTGGGAGTTGTTGCCTCATCTGAATAAGTTCAGAATGAGA
TTGAAGGAAACAATAGAAGCTGCTTTCCTATTTCAGCCACATGTTGTACTGACAATTGAC
TCCAAGGGGTTCTCCTTCCGTTTCCTGAAGCAGCTAAGGGCTAGATATAGTCAGCAAGGA
TTGGTTAGTCCTGTACACCACCATTTTGTAGCACCATCATTCTGGGCATGGAAAGGCGGT
GAAGCAAGACTAAAAGGGCTGACTGAGTTTGTCGATCATGTCTTTTGTATACTTCCTTAT
GAAGAAGAAGTTTGCAGATCAAATGGGCTGGCTGCTACTTTTGTGGGCCACCCTATACTG
GAAGATGTCTTGGAGTTGAATTTGGAAAAGAATACCCCACAAAGTGAATGGAAGGTGAAA
GGAAATTCTGAAGACTTCCGAAGTAAAAATGGAATAGCTCCAGGAGCCACGGTCATCAGC
TTGCTTCCTGGAAGCAGATTACAAGAAGTAACCCGCATGCTTTCCATCTTCTCCAACACT
GTGGAACTATTAAAACATTCCTTTTCTGAGTTGACAACAATCATTCATGTGGCTCCCAAT
CAGCATGTGAAGGACTACATTAGTAGGACCACTTATAACTGGCCTGTTTCTGTCAAATTG
ATTCCAGGAGGATCTCCACACCTGAAATATGATGCACTCAGTGCAAGCAGGGTTGCATTA
TGCACTTCTGGAACAGTTGCTGTTGAGATGCAGCTGGCACGGCTGCCATGTGTTGTTGCT
TATCGAGCTCATTTCCTAACTGAATGGTTTATTTGTTGGAAAGCAAAGATACCATTCATC
TCAATCCCCAATATTCTATTGGATTCTGCCATTATTCCTGAAGCTCTTCTTCAAGCGTGC
ACACCAGCAAAGCTTGCTTCATTGCTCATGAAATTAACTCTGGATGAAGGCCTTCGAGAA
AAACAAATTGTTGCTGCTGAAAAGGTTTTGTCTCTTTTATCTCCTCCGCAAAAAATCATA
GAGAATCGAATGCCACAAGATTTGAGATGGAAGTCTCCTGACTATACCCCAAGTATGATT
GGAGCATCTACCATACTATACTATGCAAAACCAAGATGA

Peptide Sequence

PEP ID

VIT_12s0059g01600.t01
PEP Infomation

pep chromosome:12X:12:6519198:6524165:1 gene:VIT_12s0059g01600 transcript:VIT_12s0059g01600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAKDSELRVFIVSGEVSGDTIGSRLMASLKGISPFPIRFAGVGGPMMSKQGLKPLFPME
DIAVMGIWELLPHLNKFRMRLKETIEAAFLFQPHVVLTIDSKGFSFRFLKQLRARYSQQG
LVSPVHHHFVAPSFWAWKGGEARLKGLTEFVDHVFCILPYEEEVCRSNGLAATFVGHPIL
EDVLELNLEKNTPQSEWKVKGNSEDFRSKNGIAPGATVISLLPGSRLQEVTRMLSIFSNT
VELLKHSFSELTTIIHVAPNQHVKDYISRTTYNWPVSVKLIPGGSPHLKYDALSASRVAL
CTSGTVAVEMQLARLPCVVAYRAHFLTEWFICWKAKIPFISIPNILLDSAIIPEALLQAC
TPAKLASLLMKLTLDEGLREKQIVAAEKVLSLLSPPQKIIENRMPQDLRWKSPDYTPSMI
GASTILYYAKPR

Transcript Sequence

Transcript ID

VIT_12s0059g01600.t01
Transcript Infomation

cdna chromosome:12X:12:6519198:6524165:1 gene:VIT_12s0059g01600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCAGACGTGCGCTAGACGCTCATCGCCCATAGGCCATAACCACCGGCCGATGACCTT
ACTTTGCCTCAGATAATAAACGGTGGAAATGTTGTTCAGAACGATGTGGAATTTAAAGGG
TAGGAGCAACAAGGGCTTCTCATGGCTGGTGAGATCTTTTTCAGTTTCACGCAGAGCACC
AATAGACATGGCTGCTAAAGATAGTGAACTAAGGGTCTTCATAGTTTCAGGAGAGGTTTC
TGGAGACACAATAGGTTCTCGTCTCATGGCTTCTTTAAAAGGGATTTCCCCCTTTCCTAT
TCGTTTTGCTGGTGTTGGAGGGCCCATGATGTCCAAGCAAGGATTGAAACCTCTTTTCCC
TATGGAAGATATTGCAGTAATGGGGATCTGGGAGTTGTTGCCTCATCTGAATAAGTTCAG
AATGAGATTGAAGGAAACAATAGAAGCTGCTTTCCTATTTCAGCCACATGTTGTACTGAC
AATTGACTCCAAGGGGTTCTCCTTCCGTTTCCTGAAGCAGCTAAGGGCTAGATATAGTCA
GCAAGGATTGGTTAGTCCTGTACACCACCATTTTGTAGCACCATCATTCTGGGCATGGAA
AGGCGGTGAAGCAAGACTAAAAGGGCTGACTGAGTTTGTCGATCATGTCTTTTGTATACT
TCCTTATGAAGAAGAAGTTTGCAGATCAAATGGGCTGGCTGCTACTTTTGTGGGCCACCC
TATACTGGAAGATGTCTTGGAGTTGAATTTGGAAAAGAATACCCCACAAAGTGAATGGAA
GGTGAAAGGAAATTCTGAAGACTTCCGAAGTAAAAATGGAATAGCTCCAGGAGCCACGGT
CATCAGCTTGCTTCCTGGAAGCAGATTACAAGAAGTAACCCGCATGCTTTCCATCTTCTC
CAACACTGTGGAACTATTAAAACATTCCTTTTCTGAGTTGACAACAATCATTCATGTGGC
TCCCAATCAGCATGTGAAGGACTACATTAGTAGGACCACTTATAACTGGCCTGTTTCTGT
CAAATTGATTCCAGGAGGATCTCCACACCTGAAATATGATGCACTCAGTGCAAGCAGGGT
TGCATTATGCACTTCTGGAACAGTTGCTGTTGAGATGCAGCTGGCACGGCTGCCATGTGT
TGTTGCTTATCGAGCTCATTTCCTAACTGAATGGTTTATTTGTTGGAAAGCAAAGATACC
ATTCATCTCAATCCCCAATATTCTATTGGATTCTGCCATTATTCCTGAAGCTCTTCTTCA
AGCGTGCACACCAGCAAAGCTTGCTTCATTGCTCATGAAATTAACTCTGGATGAAGGCCT
TCGAGAAAAACAAATTGTTGCTGCTGAAAAGGTTTTGTCTCTTTTATCTCCTCCGCAAAA
AATCATAGAGAATCGAATGCCACAAGATTTGAGATGGAAGTCTCCTGACTATACCCCAAG
TATGATTGGAGCATCTACCATACTATACTATGCAAAACCAAGATGAATTGTTAACCATCC
ATCATCATCCTTAGTTAAGCTCTGCACCCTATTTTCTGGGCCACATTGTAATGAAGAATC
TCAGATGTGTTGAACTTTTCAGCTCTGGAATTTAGTGACAAAAGATTACAGTAACTTTCT
TCACTTGGTTTTTTATGTAACTTCATCTTCTTGTTATCATGCAAGTACACAGGGAGCAAC
AGTAGTGGATCAGTCTT