Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g01450.t01
CDS Infomation

cds chromosome:12X:12:6379551:6386007:1 gene:VIT_12s0059g01450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTGGATAATCGGCAAGTTCAGAGCAATGGCGTGTCGAATCCGTCGTCGGAAAACGTG
GAAGAAGCAATTTTGCGGTTGAAAATACATGATAATCAGGAGGAAGGTAGTGTGGGTCAC
TCAAGTCCTTATCCTGACCGTCCTGGGGAACCTGATTGCATATATTATTTAAGGACTGGG
TTATGTGGTTATGGAAGCAATTGTCGTTTCAATCATCCTGCTTATTCTGAACAGGGTGCC
CAGTATAGAGGTGAACTCCCAGAAAGAGTTGGACAACCTGACTGTGGGTACTTTTTGAAG
ACAGGAACCTGCAAATATGGATCTACATGTAAATATCATCACCCACGGGACAGGCATGGT
GCTGGACCAGTCTCATTGAACATTGTAGGTCTACCCATGCGTCAGGAAGAAAAACCATGT
TCTTACTACATGCGAACTGGGTTGTGTAAGTTTGGAGCTGCATGCAAGTTTCATCATCCC
CAGCCTGCATCAGCTGGAACTGTTTTGCCTGCAACTGGTCCTGCTGCCTTTGGATCTACA
GGCTCATCAATTTTACCTTCATCAGGGTTACCGTATGTGGGCGGTCTTCCAGCATGGTCA
TTACCAAGAGCACCATATATACCTGGCCCGCGTATGCAAGGTCCACAGACCTACATGCCT
ATTGTTCTTTCTCCTTCTCAAGGCATCGTACCTGCACAAGGCTGGAACACTTACATGGGA
AACATGAGTCCCATATCTTCAACTGGTATTCTGGGATCCAATCTTGTCTACAACTCCAGG
AATCAGAGTGAGTCAGGTTCCAGTGGGCAGGTGCACTTGTTATCATCATTGATTCCACAT
TTACCTGAGAGGCCAGATCAACCAGAATGCCGGTATTTCATGAGCACGGGGAGCTGTAAA
TATGGTTCTGATTGCAAGTATCATCACCCAAAAGAAAGGATTGCTCAGTTGGCAACAAAT
ACTTTAGGTCCGCTTGGTCTTCCCTTGAGACCAGGGCAAGCTGTATGTTCTCACTACAAT
TTGTATGGACTTTGCAAGTATGGTCCGACTTGCAAATTTGACCACCCCTTGACCGGATAT
TCTTCTTATAATTACTGTTTGAGCCTGCCCCCTCTATCTATACTTGACCCATCTCTCTTA
CCTTATCAAAGAAACTCTTCCACGGTTCATTCATCTGAAACCTCTCCCTCTAAATCGTCA
AAATTTCCTGATTGGGTCCAGAAAACTGAGTCTGGAAGCACCAAGTCTCAGAATCCAGAT
ACAAAAGCTCCTGAAGGTCCACCAGAACAGGCTGGTTCTCTGCTGCATTCCTCGCCAAAT
TCATCTGAACCTCCACAAGATCAATCTGATTGA

Peptide Sequence

PEP ID

VIT_12s0059g01450.t01
PEP Infomation

pep chromosome:12X:12:6379551:6386007:1 gene:VIT_12s0059g01450 transcript:VIT_12s0059g01450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLDNRQVQSNGVSNPSSENVEEAILRLKIHDNQEEGSVGHSSPYPDRPGEPDCIYYLRTG
LCGYGSNCRFNHPAYSEQGAQYRGELPERVGQPDCGYFLKTGTCKYGSTCKYHHPRDRHG
AGPVSLNIVGLPMRQEEKPCSYYMRTGLCKFGAACKFHHPQPASAGTVLPATGPAAFGST
GSSILPSSGLPYVGGLPAWSLPRAPYIPGPRMQGPQTYMPIVLSPSQGIVPAQGWNTYMG
NMSPISSTGILGSNLVYNSRNQSESGSSGQVHLLSSLIPHLPERPDQPECRYFMSTGSCK
YGSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLCKYGPTCKFDHPLTGY
SSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKSSKFPDWVQKTESGSTKSQNPD
TKAPEGPPEQAGSLLHSSPNSSEPPQDQSD

Transcript Sequence

Transcript ID

VIT_12s0059g01450.t01
Transcript Infomation

cdna chromosome:12X:12:6379551:6386007:1 gene:VIT_12s0059g01450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGAGAAAAAGAGAAAAAGAAAACAAAAACAAAGAATTTATTTATCGAATTCGAATATCGC
AGATATCACATTGATTTTTCACCTCTTTTTCTTCCACTCTCATACTCTTTTGTTTTCTCT
TCAGATCAAAAATCGCTTTCTTTGTAGTTTGAAAATGGTTTTGATCTGATTTTCTTGTTT
CCAGAAGAGATACTCTTCAGTGTTGATTGAAAGTAAGGGTTTATATATTTTCCGTTGTAC
CGATGCTGGATAATCGGCAAGTTCAGAGCAATGGCGTGTCGAATCCGTCGTCGGAAAACG
TGGAAGAAGCAATTTTGCGGTTGAAAATACATGATAATCAGGAGGAAGGTAGTGTGGGTC
ACTCAAGTCCTTATCCTGACCGTCCTGGGGAACCTGATTGCATATATTATTTAAGGACTG
GGTTATGTGGTTATGGAAGCAATTGTCGTTTCAATCATCCTGCTTATTCTGAACAGGGTG
CCCAGTATAGAGGTGAACTCCCAGAAAGAGTTGGACAACCTGACTGTGGGTACTTTTTGA
AGACAGGAACCTGCAAATATGGATCTACATGTAAATATCATCACCCACGGGACAGGCATG
GTGCTGGACCAGTCTCATTGAACATTGTAGGTCTACCCATGCGTCAGGAAGAAAAACCAT
GTTCTTACTACATGCGAACTGGGTTGTGTAAGTTTGGAGCTGCATGCAAGTTTCATCATC
CCCAGCCTGCATCAGCTGGAACTGTTTTGCCTGCAACTGGTCCTGCTGCCTTTGGATCTA
CAGGCTCATCAATTTTACCTTCATCAGGGTTACCGTATGTGGGCGGTCTTCCAGCATGGT
CATTACCAAGAGCACCATATATACCTGGCCCGCGTATGCAAGGTCCACAGACCTACATGC
CTATTGTTCTTTCTCCTTCTCAAGGCATCGTACCTGCACAAGGCTGGAACACTTACATGG
GAAACATGAGTCCCATATCTTCAACTGGTATTCTGGGATCCAATCTTGTCTACAACTCCA
GGAATCAGAGTGAGTCAGGTTCCAGTGGGCAGGTGCACTTGTTATCATCATTGATTCCAC
ATTTACCTGAGAGGCCAGATCAACCAGAATGCCGGTATTTCATGAGCACGGGGAGCTGTA
AATATGGTTCTGATTGCAAGTATCATCACCCAAAAGAAAGGATTGCTCAGTTGGCAACAA
ATACTTTAGGTCCGCTTGGTCTTCCCTTGAGACCAGGGCAAGCTGTATGTTCTCACTACA
ATTTGTATGGACTTTGCAAGTATGGTCCGACTTGCAAATTTGACCACCCCTTGACCGGAT
ATTCTTCTTATAATTACTGTTTGAGCCTGCCCCCTCTATCTATACTTGACCCATCTCTCT
TACCTTATCAAAGAAACTCTTCCACGGTTCATTCATCTGAAACCTCTCCCTCTAAATCGT
CAAAATTTCCTGATTGGGTCCAGAAAACTGAGTCTGGAAGCACCAAGTCTCAGAATCCAG
ATACAAAAGCTCCTGAAGGTCCACCAGAACAGGCTGGTTCTCTGCTGCATTCCTCGCCAA
ATTCATCTGAACCTCCACAAGATCAATCTGATTGAAGTCACTTCTTTTTTGTTCTTTTTC
ACTTTCTATTTTGTTGCCAAGTACCTTTTAAGGAAATTTTTATGATTAGTACCTCATGCC
CCCCTTTCACCTGTGGTTCTGCGGAGTGGATAGGTTGTTTGGCGATCAAAGCGATGAGCA
AAAGTGGGGGGCATGGAACGGCCTCTTTTTGTGGTGAATAAAATGCAGGTGAAAAAAATT
GTAAAATTCCTTTTCTTCTTTGACTCGTTCCTTTTCCACAGATGATTATCGCTAAAACGT
CTGAATCAACTGCTCTTAGGTGTGAAAATTTTTCATTTTTAAGCACTGCAACCTGTGGCT
TTTACATACATAAATCAATTTAAATGTTGGCGATGTGAA