Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g01340.t01
CDS Infomation

cds chromosome:12X:12:6277210:6279677:-1 gene:VIT_12s0059g01340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATCCCAGCGCCGGGCCGGCGTCGCCGTCGTCCACGTCCAAACCCACCCTGGAAGTC
ATCACCCAACTCCTCTCTTTCCTCCTCCTTTCGTCTCTTTCCGTCAAGTCCTTCATCGGA
CGGTGGCAAGTCCTCCGCTCTAAGCTCTCAAGTCTGCAGTCCTCTATCGTTGAAATCTCC
GATTCGCCCCACTGGTCCGAAAATCCTCTTTTCCAAACCCTCATTCCGAGTCTTGTATCC
ACTCTCCAGCGCCTCAAGTCGCTCTCTGATCAATGCGCCGACTCGGCATACGCCGGCGGG
AAGCTTCTCATGCAGAGCGACCTCGACATGGCCTCCGCTTCACTCTCGAAACAGCTTCAT
GACCTCGACTTACTCCTCAGATCCGGTGTCCTCCGCCAATCGAATGCGATTGTTCTTTCG
CAGCCTGGTCCTGGTTCGGCCAAGGAGGATTTAGGGTTCTTTGTTAGAGATCTTTTCACG
AGATTACAAATCGGAGGCATCGAGTTCAAGAAGAAAGCTTTGGAGTCGCTGCTTCAGCTT
CTGGCAGATGATGAAAAAGCTCCAGTTACGGTGGCGAAGGAAGGTAACATTGCGTATTTG
GTGCATTTGCTTGATATGAATAATCATCCCTGTATTCGAGAACAAGCGGTTACGGCGATT
TCTGTACTGGCGTCTGCCAGCGATCAATCTATAAAATGCGTTTTCGAAGAAGGCGGCTTG
GGGCCTTTGTTGAGAATACTTGAAACAGGATCGGTGACACTGAAGGAGAAGGCGGCAATT
GCCGTGGAGGCTATCACTGCCGATCCGGAAAATGCGTGGGCGGTTTCTGCATACGGCGGT
GTCTCGATATTGATCGAAGCGTGCCGATCTGCTACTTCGTCGACGCAGACGCACGCTGTT
GGTGCCCTTAGAAACGTAGCTGTCGTGGAAGATATTAGAAACTCGTTGGGGGAGGAAGGA
GCTGTTCCGATACTAGTCCAATTACTGGCTTCCGGCAGCGGGCCAGCCCAAGAAAAGGCT
GCGAACTGTATAGCGATCCTCGCCTCTTCCGGTGAGTATTTTAGAGCTCTGATAATACAA
GAAAGAGGATTGCTGCGATTGATGCAATTGCTTCATGACTCATCAAGTTCGGAAGCGTTA
GAACACGTCCTCCGAACGCTCATCTCACTCTCAGCCTCCGATTCCATATCCAGATCCTTG
TCCTCATCAACCGCTTTCATCATCCAACTCTCAGAGTTGATCAAGCACGGAAACATTATT
CTACAGCACAGCGCTGCCTCTCTGCTCGCTCATCTGTCCATAAGCGACGGGAACAAACGC
GCCATTGCCAGTTGTTTGGCTTCTCTGGTGAAGCTAATGGAGTCGTCGAAGCCTGTGGGA
TTGCAGGAGGTGGCGGCGCAGGCACTCGTTTCATTGCTGGCCGTTCGATCAAATCGAAAA
GAGTTGGTTAGGGATGAGAAGAGTGTGATGAGGTTGATGCAGATGCTGGATCCTAAGAGT
GAACTAGAGGAGGAGGAGTCCGTTTGGATTTTCTAA

Peptide Sequence

PEP ID

VIT_12s0059g01340.t01
PEP Infomation

pep chromosome:12X:12:6277210:6279677:-1 gene:VIT_12s0059g01340 transcript:VIT_12s0059g01340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHPSAGPASPSSTSKPTLEVITQLLSFLLLSSLSVKSFIGRWQVLRSKLSSLQSSIVEIS
DSPHWSENPLFQTLIPSLVSTLQRLKSLSDQCADSAYAGGKLLMQSDLDMASASLSKQLH
DLDLLLRSGVLRQSNAIVLSQPGPGSAKEDLGFFVRDLFTRLQIGGIEFKKKALESLLQL
LADDEKAPVTVAKEGNIAYLVHLLDMNNHPCIREQAVTAISVLASASDQSIKCVFEEGGL
GPLLRILETGSVTLKEKAAIAVEAITADPENAWAVSAYGGVSILIEACRSATSSTQTHAV
GALRNVAVVEDIRNSLGEEGAVPILVQLLASGSGPAQEKAANCIAILASSGEYFRALIIQ
ERGLLRLMQLLHDSSSSEALEHVLRTLISLSASDSISRSLSSSTAFIIQLSELIKHGNII
LQHSAASLLAHLSISDGNKRAIASCLASLVKLMESSKPVGLQEVAAQALVSLLAVRSNRK
ELVRDEKSVMRLMQMLDPKSELEEEESVWIF

Transcript Sequence

Transcript ID

VIT_12s0059g01340.t01
Transcript Infomation

cdna chromosome:12X:12:6277210:6279677:-1 gene:VIT_12s0059g01340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCATCCCAGCGCCGGGCCGGCGTCGCCGTCGTCCACGTCCAAACCCACCCTGGAAGTC
ATCACCCAACTCCTCTCTTTCCTCCTCCTTTCGTCTCTTTCCGTCAAGTCCTTCATCGGA
CGGTGGCAAGTCCTCCGCTCTAAGCTCTCAAGTCTGCAGTCCTCTATCGTTGAAATCTCC
GATTCGCCCCACTGGTCCGAAAATCCTCTTTTCCAAACCCTCATTCCGAGTCTTGTATCC
ACTCTCCAGCGCCTCAAGTCGCTCTCTGATCAATGCGCCGACTCGGCATACGCCGGCGGG
AAGCTTCTCATGCAGAGCGACCTCGACATGGCCTCCGCTTCACTCTCGAAACAGCTTCAT
GACCTCGACTTACTCCTCAGATCCGGTGTCCTCCGCCAATCGAATGCGATTGTTCTTTCG
CAGCCTGGTCCTGGTTCGGCCAAGGAGGATTTAGGGTTCTTTGTTAGAGATCTTTTCACG
AGATTACAAATCGGAGGCATCGAGTTCAAGAAGAAAGCTTTGGAGTCGCTGCTTCAGCTT
CTGGCAGATGATGAAAAAGCTCCAGTTACGGTGGCGAAGGAAGGTAACATTGCGTATTTG
GTGCATTTGCTTGATATGAATAATCATCCCTGTATTCGAGAACAAGCGGTTACGGCGATT
TCTGTACTGGCGTCTGCCAGCGATCAATCTATAAAATGCGTTTTCGAAGAAGGCGGCTTG
GGGCCTTTGTTGAGAATACTTGAAACAGGATCGGTGACACTGAAGGAGAAGGCGGCAATT
GCCGTGGAGGCTATCACTGCCGATCCGGAAAATGCGTGGGCGGTTTCTGCATACGGCGGT
GTCTCGATATTGATCGAAGCGTGCCGATCTGCTACTTCGTCGACGCAGACGCACGCTGTT
GGTGCCCTTAGAAACGTAGCTGTCGTGGAAGATATTAGAAACTCGTTGGGGGAGGAAGGA
GCTGTTCCGATACTAGTCCAATTACTGGCTTCCGGCAGCGGGCCAGCCCAAGAAAAGGCT
GCGAACTGTATAGCGATCCTCGCCTCTTCCGGTGAGTATTTTAGAGCTCTGATAATACAA
GAAAGAGGATTGCTGCGATTGATGCAATTGCTTCATGACTCATCAAGTTCGGAAGCGTTA
GAACACGTCCTCCGAACGCTCATCTCACTCTCAGCCTCCGATTCCATATCCAGATCCTTG
TCCTCATCAACCGCTTTCATCATCCAACTCTCAGAGTTGATCAAGCACGGAAACATTATT
CTACAGCACAGCGCTGCCTCTCTGCTCGCTCATCTGTCCATAAGCGACGGGAACAAACGC
GCCATTGCCAGTTGTTTGGCTTCTCTGGTGAAGCTAATGGAGTCGTCGAAGCCTGTGGGA
TTGCAGGAGGTGGCGGCGCAGGCACTCGTTTCATTGCTGGCCGTTCGATCAAATCGAAAA
GAGTTGGTTAGGGATGAGAAGAGTGTGATGAGGTTGATGCAGATGCTGGATCCTAAGAGT
GAACTAGAGGAGGAGGAGTCCGTTTGGATTTTCTAACTGTCGAAGAGGGAACTAGTTTTC
CTGGACTGAGGACTGAGCAACCAACAAACACACACTTCGTATACGCTTTAATTAATTAAA
CTTAAAATATCATTTAATATTATATATCACAACGGCATGGATGCGGTTTTTAGGGAGTAT
CCTTGTTTCTTCTTTTCTTTTTCTTTTTTTCTTTTTTAATTTAATTTTAATTCATTCACT
CATGAAAGCTGCAAGAGTGTAAGAGGGAATTGATGATGTCTGTTATTACTAGTATTATTT
CGTTTTTTTTTTTAAATTCGAAATGTTCGGATTATCACCTCTGCTTGATAATGTACATCC
CGGGAGTCTTTGTT