Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g01280.t01
CDS Infomation

cds chromosome:12X:12:6204071:6213686:1 gene:VIT_12s0059g01280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGACATAACTCACCTTCCCATGGAGCAGCTCCAGGACCTTGAGTACTGCATAGAC
TCTAACCCTCCTTGGCCCGAAACAATTCTATTAGCATTTCAAAACTATATTTTAGTGTTG
GGCACGAGCGTTATGATCCCTTCTTTGCTAGTTCCAGTAATGGGTGGAAACGATGGGGAC
AAGATACGAGTTATACAAACTCTGCTCTTTGTAGCTGGCATTAACACACTTCTCCAAGCA
CTTTTTGGGACCAGGTTGCCCGCTGTAGTTGGAGGATCCTTTGCGTATATCATTCCCATA
GTTTACATAATAAGCGATTCATCTCTACAACGAATTTCTGAACCTCATGAAAGATTTATA
CATACAATGCGAGCTATCCAAGGAGCTTTGATTGTTGCTGCAAGTATACAAATCATCTTG
GGTTACAGCCAAGTTTGGGGTCTGTTTTCAAGGTTCTTTAGTCCTCTTGGGATGGCACCT
GTGGTTGGATTGGTTGGTTTGGGATTGTTCCAACGAGGATTCCCTGCGTTGGGGAATTGT
GTTGAAATTGGGATCCCGATGCTACTTTTGGTCATTGGAGTGTCACAATATCTAAAGCAT
GTGAGGCCATTAAGGGGCACACCCATTTTTGAACGATTTCCAGTATTGATCTGTGTTACA
ATTGTATGGATCTATGCCCTCATCTTGACTGCTAGTGGTGCCTACCGAGGCAGGCCTATA
CAAACTCAAATCAGTTGTCGTACGGACAAAGCAAACCTCATATCCTCTGCTCCATGGTTT
AAGTTTCCATATCCCCTGCAATGGGGTCCACCTACTTTTGCAGCGGGTCATTCGTTTGCT
ATGATGTCTGCAGTTCTTGTATCGATGATTGAGTCAACTGGGGCATATAAGGCAGCATCG
CGGTTGGCAATTGCAACTCCACCTCCCGCTTATGTACTGAGCCGGGGTATTGGCTGGCAG
GGGATTGGGATTTTGCTGGATGGTCTTTTTGGAACCTGCACTGGTTCCACTGTATCTGTG
GAAAATGTGGGACTTCTAGGACTGACTCGAGTTGGAAGTCGTAGAGTTGTTCAGATTTCT
GCTGGCTTCATGATATTCTTCTCCATGTTAGGCAAATTTGGAGCAGTTTTTGCTTCTATA
CCGTTTCCTATTTTTGCTGCATTATATTGTGTTCTTTTCGGCCTTGTGGCATCAGTTGGG
CTGTCATTTCTTCAGTTCACAAACATGAACTCCATGAGAAATCTTATCATTACGGGGCTC
TCCCTCTTCCTTGGGATATCTGTTCCTCAATTTTTTAACGAATATTGGGGTCGTAATCGC
CATGGTCTTGTCAATACCAATGCTGGATGGTTCAATGCATTCTTGAATACCATATTCTCA
TCACCAGCAACGATAGGATTGATCGTTGCAGTGTTTCTGGATAACACATTAGATGTGGAA
AAGGCGAAGAAAGACAGAGGGATGCCATGGTGGGTAAAGTTCAGAACATTTAGAGGAGAT
AACCGAAACGAAGAGTTCTACACTCTGCCATTCAATCTCAACAGGTTCTTTCCACCAACA
TAG

Peptide Sequence

PEP ID

VIT_12s0059g01280.t01
PEP Infomation

pep chromosome:12X:12:6204071:6213686:1 gene:VIT_12s0059g01280 transcript:VIT_12s0059g01280.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADITHLPMEQLQDLEYCIDSNPPWPETILLAFQNYILVLGTSVMIPSLLVPVMGGNDGD
KIRVIQTLLFVAGINTLLQALFGTRLPAVVGGSFAYIIPIVYIISDSSLQRISEPHERFI
HTMRAIQGALIVAASIQIILGYSQVWGLFSRFFSPLGMAPVVGLVGLGLFQRGFPALGNC
VEIGIPMLLLVIGVSQYLKHVRPLRGTPIFERFPVLICVTIVWIYALILTASGAYRGRPI
QTQISCRTDKANLISSAPWFKFPYPLQWGPPTFAAGHSFAMMSAVLVSMIESTGAYKAAS
RLAIATPPPAYVLSRGIGWQGIGILLDGLFGTCTGSTVSVENVGLLGLTRVGSRRVVQIS
AGFMIFFSMLGKFGAVFASIPFPIFAALYCVLFGLVASVGLSFLQFTNMNSMRNLIITGL
SLFLGISVPQFFNEYWGRNRHGLVNTNAGWFNAFLNTIFSSPATIGLIVAVFLDNTLDVE
KAKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFPPT

Transcript Sequence

Transcript ID

VIT_12s0059g01280.t01
Transcript Infomation

cdna chromosome:12X:12:6204071:6213686:1 gene:VIT_12s0059g01280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGCTTGATCAATGGCTGACATAACTCACCTTCCCATGGAGCAGCTCCAGGACCTTGAGT
ACTGCATAGACTCTAACCCTCCTTGGCCCGAAACAATTCTATTAGCATTTCAAAACTATA
TTTTAGTGTTGGGCACGAGCGTTATGATCCCTTCTTTGCTAGTTCCAGTAATGGGTGGAA
ACGATGGGGACAAGATACGAGTTATACAAACTCTGCTCTTTGTAGCTGGCATTAACACAC
TTCTCCAAGCACTTTTTGGGACCAGGTTGCCCGCTGTAGTTGGAGGATCCTTTGCGTATA
TCATTCCCATAGTTTACATAATAAGCGATTCATCTCTACAACGAATTTCTGAACCTCATG
AAAGATTTATACATACAATGCGAGCTATCCAAGGAGCTTTGATTGTTGCTGCAAGTATAC
AAATCATCTTGGGTTACAGCCAAGTTTGGGGTCTGTTTTCAAGGTTCTTTAGTCCTCTTG
GGATGGCACCTGTGGTTGGATTGGTTGGTTTGGGATTGTTCCAACGAGGATTCCCTGCGT
TGGGGAATTGTGTTGAAATTGGGATCCCGATGCTACTTTTGGTCATTGGAGTGTCACAAT
ATCTAAAGCATGTGAGGCCATTAAGGGGCACACCCATTTTTGAACGATTTCCAGTATTGA
TCTGTGTTACAATTGTATGGATCTATGCCCTCATCTTGACTGCTAGTGGTGCCTACCGAG
GCAGGCCTATACAAACTCAAATCAGTTGTCGTACGGACAAAGCAAACCTCATATCCTCTG
CTCCATGGTTTAAGTTTCCATATCCCCTGCAATGGGGTCCACCTACTTTTGCAGCGGGTC
ATTCGTTTGCTATGATGTCTGCAGTTCTTGTATCGATGATTGAGTCAACTGGGGCATATA
AGGCAGCATCGCGGTTGGCAATTGCAACTCCACCTCCCGCTTATGTACTGAGCCGGGGTA
TTGGCTGGCAGGGGATTGGGATTTTGCTGGATGGTCTTTTTGGAACCTGCACTGGTTCCA
CTGTATCTGTGGAAAATGTGGGACTTCTAGGACTGACTCGAGTTGGAAGTCGTAGAGTTG
TTCAGATTTCTGCTGGCTTCATGATATTCTTCTCCATGTTAGGCAAATTTGGAGCAGTTT
TTGCTTCTATACCGTTTCCTATTTTTGCTGCATTATATTGTGTTCTTTTCGGCCTTGTGG
CATCAGTTGGGCTGTCATTTCTTCAGTTCACAAACATGAACTCCATGAGAAATCTTATCA
TTACGGGGCTCTCCCTCTTCCTTGGGATATCTGTTCCTCAATTTTTTAACGAATATTGGG
GTCGTAATCGCCATGGTCTTGTCAATACCAATGCTGGATGGTTCAATGCATTCTTGAATA
CCATATTCTCATCACCAGCAACGATAGGATTGATCGTTGCAGTGTTTCTGGATAACACAT
TAGATGTGGAAAAGGCGAAGAAAGACAGAGGGATGCCATGGTGGGTAAAGTTCAGAACAT
TTAGAGGAGATAACCGAAACGAAGAGTTCTACACTCTGCCATTCAATCTCAACAGGTTCT
TTCCACCAACATAGCTGGGTTGATCGAAATCAGAA