Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g01150.t01
CDS Infomation

cds chromosome:12X:12:6086943:6092094:-1 gene:VIT_12s0059g01150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGGTACTTCAGCTTCAACAACCCAATTATGGCATCTCCCAGGGCCCATCACTGCAG
AGAAGAAGGCAGAGAGCTCTCAGGACCGTGTGCTTGCAGACACAAGCCCTTCCCTCCAGA
ACCCAGAGGATAATGGAGAGTATATCTGTAAGTGGGGAAGTGGGTGGTGCTGGTGGAGCA
TACTCTTATAGTGCCCTCAAGAGGCTGGACCAGCTGTGGTCTAGCATTTGCTCTGCTCAA
ACAGTTTACCAAGAACCCCGGAAAGTAGTCTCGAGTGTTCCTGGCTTGTTCAAACATTCT
GCTGTGGATGACAAAGCAGTGGAAACATTTGATGTTTTAGTTTGTGGAGGTACTTTGGGG
ATCTTCATTGCCACAGCCTTGAGTTCCAAAGGTCTTCGAGTAGGCGTTGTGGAGAGGAAC
ATACTAAAAGGGAGGGAACAGGAATGGAATATCTCGAGGAAAGAACTTTTGGAACTTGTA
GAAGCTGGCATTCTAGTAGAAGATGATATCAAACAAGTTACAGCAGCGAAATTTAATCCT
AACAGATGTGGATTTGAGGGGAAGGGCGAGATTTGGGTTGAAGACATTCTTAATCTTGGT
GTATCACCTGTAAAGCTTATAGAGGTAGTGAAGAGACGTTTTACATCCCTTGGAGGAGTC
ATCTTTGAGGGTTACAGCGTGTCTAATATATGCATATATGAGGATGCAGCGGTCTTGCAA
CTAGCAGAAGGAAATATTTTGTCAACACGTCTTCTCATCGATGCTATGGGGAATTTTTCC
CCTGTGGTAAAGCAGATGAGGGGTGGAAGGAAGCCAGATGGAGTTTGCCTTGTTGTTGGT
TCTTGTGCACGTGGTTTTACAAATAACTCAACAAGTGATGTCATATACAGTAGTTCATCA
GTCAAGAAGGTTGGAGAATCAGAAGTACAATATTTTTGGGAGGCATTTCCAGCTGGCTCA
GGTCCCGTGGATCGAACTACTTACATGTTTACTTATGTTGATCCTCAACCAAAATGCCCA
AAATTGGAAGACTTATTGGAAGACTACTGGGATATGATGCCAGAATATCAGGGAGTCTCT
TTGGAAGATCTACAGATACTGAGAGTTGTATTTGGAATTTTCCCTACATATCGTGACAGT
CCATTGCCAGCAGCTTTTGATCGCATTTTACAGTTTGGTGATGCTAGCGGCATACAGTCA
CCAGTTTCATTTGGTGGTTTTGGGAGCTTGACCAGGCACCTTGAGAGGTTGTCAACTGGA
ATATATGAAGCAATCACTGGCAACTTTCTTGACTCATACAACTTGTCTTTGCTGAATCCA
TATATGCCCAACCTTAGTGCAGCATGGTTGTTTCAAAGGGCAATGTCAGCAAAGCAACAG
TATGATGTTTCTCCTGATTTCATCAGTGAGCTTCTTTATGTCAATTTCCAGAGCATGCAG
AGGCTAGGTGATCCAGTACTAAGGCCATTTCTTCAGGATGTTATACAGTTTGGGCCTCTT
GTCAAGACATTAGGCCTTGTTATGCTGAGTAAACCTCAAATTCTTCCATCAATTTTCAAG
CAGGTTGGTGTTCCAGTGCTGCTTGACTGGTCTGGACATTTTGTCATGTTGGGTTACTAT
ACATTTCTCTCAACCTTCATTGATCCTGCAATTAGGCCACTGATAAATGCATTTCCGGCC
AAGATGAAGTACAAGTGGAAGCGGTATCTTGAGGCTTGGAAATATGGAGCTGGTTTAGAT
TACAAGCAATGA

Peptide Sequence

PEP ID

VIT_12s0059g01150.t01
PEP Infomation

pep chromosome:12X:12:6086943:6092094:-1 gene:VIT_12s0059g01150 transcript:VIT_12s0059g01150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVVLQLQQPNYGISQGPSLQRRRQRALRTVCLQTQALPSRTQRIMESISVSGEVGGAGGA
YSYSALKRLDQLWSSICSAQTVYQEPRKVVSSVPGLFKHSAVDDKAVETFDVLVCGGTLG
IFIATALSSKGLRVGVVERNILKGREQEWNISRKELLELVEAGILVEDDIKQVTAAKFNP
NRCGFEGKGEIWVEDILNLGVSPVKLIEVVKRRFTSLGGVIFEGYSVSNICIYEDAAVLQ
LAEGNILSTRLLIDAMGNFSPVVKQMRGGRKPDGVCLVVGSCARGFTNNSTSDVIYSSSS
VKKVGESEVQYFWEAFPAGSGPVDRTTYMFTYVDPQPKCPKLEDLLEDYWDMMPEYQGVS
LEDLQILRVVFGIFPTYRDSPLPAAFDRILQFGDASGIQSPVSFGGFGSLTRHLERLSTG
IYEAITGNFLDSYNLSLLNPYMPNLSAAWLFQRAMSAKQQYDVSPDFISELLYVNFQSMQ
RLGDPVLRPFLQDVIQFGPLVKTLGLVMLSKPQILPSIFKQVGVPVLLDWSGHFVMLGYY
TFLSTFIDPAIRPLINAFPAKMKYKWKRYLEAWKYGAGLDYKQ

Transcript Sequence

Transcript ID

VIT_12s0059g01150.t01
Transcript Infomation

cdna chromosome:12X:12:6086943:6092094:-1 gene:VIT_12s0059g01150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGAGAAAATTTTCAGAGAATTTGGACCAAGTTAAGGCACCACCGCCATGGTGGTACTTC
AGCTTCAACAACCCAATTATGGCATCTCCCAGGGCCCATCACTGCAGAGAAGAAGGCAGA
GAGCTCTCAGGACCGTGTGCTTGCAGACACAAGCCCTTCCCTCCAGAACCCAGAGGATAA
TGGAGAGTATATCTGTAAGTGGGGAAGTGGGTGGTGCTGGTGGAGCATACTCTTATAGTG
CCCTCAAGAGGCTGGACCAGCTGTGGTCTAGCATTTGCTCTGCTCAAACAGTTTACCAAG
AACCCCGGAAAGTAGTCTCGAGTGTTCCTGGCTTGTTCAAACATTCTGCTGTGGATGACA
AAGCAGTGGAAACATTTGATGTTTTAGTTTGTGGAGGTACTTTGGGGATCTTCATTGCCA
CAGCCTTGAGTTCCAAAGGTCTTCGAGTAGGCGTTGTGGAGAGGAACATACTAAAAGGGA
GGGAACAGGAATGGAATATCTCGAGGAAAGAACTTTTGGAACTTGTAGAAGCTGGCATTC
TAGTAGAAGATGATATCAAACAAGTTACAGCAGCGAAATTTAATCCTAACAGATGTGGAT
TTGAGGGGAAGGGCGAGATTTGGGTTGAAGACATTCTTAATCTTGGTGTATCACCTGTAA
AGCTTATAGAGGTAGTGAAGAGACGTTTTACATCCCTTGGAGGAGTCATCTTTGAGGGTT
ACAGCGTGTCTAATATATGCATATATGAGGATGCAGCGGTCTTGCAACTAGCAGAAGGAA
ATATTTTGTCAACACGTCTTCTCATCGATGCTATGGGGAATTTTTCCCCTGTGGTAAAGC
AGATGAGGGGTGGAAGGAAGCCAGATGGAGTTTGCCTTGTTGTTGGTTCTTGTGCACGTG
GTTTTACAAATAACTCAACAAGTGATGTCATATACAGTAGTTCATCAGTCAAGAAGGTTG
GAGAATCAGAAGTACAATATTTTTGGGAGGCATTTCCAGCTGGCTCAGGTCCCGTGGATC
GAACTACTTACATGTTTACTTATGTTGATCCTCAACCAAAATGCCCAAAATTGGAAGACT
TATTGGAAGACTACTGGGATATGATGCCAGAATATCAGGGAGTCTCTTTGGAAGATCTAC
AGATACTGAGAGTTGTATTTGGAATTTTCCCTACATATCGTGACAGTCCATTGCCAGCAG
CTTTTGATCGCATTTTACAGTTTGGTGATGCTAGCGGCATACAGTCACCAGTTTCATTTG
GTGGTTTTGGGAGCTTGACCAGGCACCTTGAGAGGTTGTCAACTGGAATATATGAAGCAA
TCACTGGCAACTTTCTTGACTCATACAACTTGTCTTTGCTGAATCCATATATGCCCAACC
TTAGTGCAGCATGGTTGTTTCAAAGGGCAATGTCAGCAAAGCAACAGTATGATGTTTCTC
CTGATTTCATCAGTGAGCTTCTTTATGTCAATTTCCAGAGCATGCAGAGGCTAGGTGATC
CAGTACTAAGGCCATTTCTTCAGGATGTTATACAGTTTGGGCCTCTTGTCAAGACATTAG
GCCTTGTTATGCTGAGTAAACCTCAAATTCTTCCATCAATTTTCAAGCAGGTTGGTGTTC
CAGTGCTGCTTGACTGGTCTGGACATTTTGTCATGTTGGGTTACTATACATTTCTCTCAA
CCTTCATTGATCCTGCAATTAGGCCACTGATAAATGCATTTCCGGCCAAGATGAAGTACA
AGTGGAAGCGGTATCTTGAGGCTTGGAAATATGGAGCTGGTTTAGATTACAAGCAATGA