Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g01100.t01
CDS Infomation

cds chromosome:12X:12:6009323:6014046:-1 gene:VIT_12s0059g01100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTCGAGCTGAGAAGAGCCAGAGAGAAGCTCGAGAGAGAGCAGAAGGAGAGGAAG
GAGAAAGCAAGGTTGAAGTTGGAAAGGGATAGAAAATCCAAACAGGAAGCGGCCCGCCAG
CGCGATGCCATTGAAGCGGTTCAGAGATCTCGGCGCCTTGACGCCGCCGAAGCCCAACTC
AAGGCTGATCAGCAAATGGAAGAAAGTTTACTTGCTGGCAGAGGAGTAATGTTTTTTCGT
ATTTTAGAAGCTGTTGCTTATCAGGGTAATGGAGATAAGATCAAATTGCCACCTTCCTGC
TTTAAGGAATTATCTGATCAGGGTGCTTTTGATAAAGGGCCACTTTACTTTGGGCTTTCA
GTTGTTCATCAAGAGGGTTCTTTAGATACAAAGGCAGCTGAAACACAAAATCAGAGGACA
ACTCATGCAGGTGTTCTGGAATTCACTGCAGAGGAAGGTTCTGTCAGCCTTCCTCCTCAT
GTATGGAGTAACTTGTTTCCGGAGGAAACCTTAAAGTCTCCATTGGTTGAAGTTCGTTAT
CTTTGGCTCCCAAAAGGAACTTATGCAAAACTTCAAGCAGATGGGATTGGCTTTTCAGAC
ATACCCAATCACAAGGCTGTCCTTGAAACAAGACTACGCCAGCATGCCACTCTTTCTCAA
GATGATGTCCTGATCGTGAACCATGGGGAGTTGACATACAAGTTAAAGGTTCTTGAGTTA
AAACCATCCTCAAGTATATCTGTCCTGGAAACAGATATTGAGGTTGATATAGTGGGTCCT
GATTCGGTTTCAGGGAGGACAAATCAGCAGTTCCTGAAACCACTGGAATTTGGAAAATCA
GAGACTGGAATGGTTGAGGAAGGTAATTATGTGTATTACAAGTTCTCAATGGATGGTGAC
ATCTTGGGGATAATTGCTTCTGGGGATGCAAGAATTGAGGTAAAGATAGAAGCAGAGTCA
GATGGTGGAGATACTGATCTTTACATTTCGAGACATCCCCTCATATTCCCAAATAGGCAC
CAACATGAATGGTCTTCTCATGATGTGGGTTCAAAAACTTTGATACTGAGTCATAAGGAT
CAGAGCTTGGAAGCAGGTACTTTTAGCATTGGTGTCTATGGCTTTAAAGGAACAACAAAG
TACCAGATATCGGTAAGTGTTCAAGATAACTTAAACCACAAGGTGGGTCAACAAGCTACA
TCTTCTTCATCTATGGAGGTGGATACCGTAGAGTGTAGGAATTGCAAGCATTATATACCC
AGTAGATCTATAGCACTGCATGAGGCCTATTGTAGCAGACATAACATCATTTGTCCACAT
GCTGGTTGTGGGGTTGTTCTCAGGGTGGCAGAGGCCAAGAACCATGTGCATTGTGACAAA
TGTGGGCAAGCCCTTCAAAGGGGAGAGATGGAGAAGCACATGAAAGTGTTCCATGAACCA
CTTCACTGCCCATGCGGGGTAGTACTTGAGAAGGAACTAATGGTGCAACACCAGGCTTCA
GCGTGCCCTCTTCGCCTAATAACATGCCGGTTTTGTGGTGACATGGTTCAGGCTGGGAGT
TCTGCCATGGACGTCCGAGACCGATTAAGAGGACTGTCTGAGCATGAAAGCATCTGTGGC
TCAAGAACCGCCCCATGCGACTCATGTGGGCGTTCCGTCATGCTAAAAGAGATGGACATC
CACCAAATAGCCGTTCATCAGAGGAACTAA

Peptide Sequence

PEP ID

VIT_12s0059g01100.t01
PEP Infomation

pep chromosome:12X:12:6009323:6014046:-1 gene:VIT_12s0059g01100 transcript:VIT_12s0059g01100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDFELRRAREKLEREQKERKEKARLKLERDRKSKQEAARQRDAIEAVQRSRRLDAAEAQL
KADQQMEESLLAGRGVMFFRILEAVAYQGNGDKIKLPPSCFKELSDQGAFDKGPLYFGLS
VVHQEGSLDTKAAETQNQRTTHAGVLEFTAEEGSVSLPPHVWSNLFPEETLKSPLVEVRY
LWLPKGTYAKLQADGIGFSDIPNHKAVLETRLRQHATLSQDDVLIVNHGELTYKLKVLEL
KPSSSISVLETDIEVDIVGPDSVSGRTNQQFLKPLEFGKSETGMVEEGNYVYYKFSMDGD
ILGIIASGDARIEVKIEAESDGGDTDLYISRHPLIFPNRHQHEWSSHDVGSKTLILSHKD
QSLEAGTFSIGVYGFKGTTKYQISVSVQDNLNHKVGQQATSSSSMEVDTVECRNCKHYIP
SRSIALHEAYCSRHNIICPHAGCGVVLRVAEAKNHVHCDKCGQALQRGEMEKHMKVFHEP
LHCPCGVVLEKELMVQHQASACPLRLITCRFCGDMVQAGSSAMDVRDRLRGLSEHESICG
SRTAPCDSCGRSVMLKEMDIHQIAVHQRN

Transcript Sequence

Transcript ID

VIT_12s0059g01100.t01
Transcript Infomation

cdna chromosome:12X:12:6009323:6014046:-1 gene:VIT_12s0059g01100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGAGATAAAAGGGGTTTCTGTGAACATCTAGAGATAGAGGGATGGATTTCGAGCTGAG
AAGAGCCAGAGAGAAGCTCGAGAGAGAGCAGAAGGAGAGGAAGGAGAAAGCAAGGTTGAA
GTTGGAAAGGGATAGAAAATCCAAACAGGAAGCGGCCCGCCAGCGCGATGCCATTGAAGC
GGTTCAGAGATCTCGGCGCCTTGACGCCGCCGAAGCCCAACTCAAGGCTGATCAGCAAAT
GGAAGAAAGTTTACTTGCTGGCAGAGGAGTAATGTTTTTTCGTATTTTAGAAGCTGTTGC
TTATCAGGGTAATGGAGATAAGATCAAATTGCCACCTTCCTGCTTTAAGGAATTATCTGA
TCAGGGTGCTTTTGATAAAGGGCCACTTTACTTTGGGCTTTCAGTTGTTCATCAAGAGGG
TTCTTTAGATACAAAGGCAGCTGAAACACAAAATCAGAGGACAACTCATGCAGGTGTTCT
GGAATTCACTGCAGAGGAAGGTTCTGTCAGCCTTCCTCCTCATGTATGGAGTAACTTGTT
TCCGGAGGAAACCTTAAAGTCTCCATTGGTTGAAGTTCGTTATCTTTGGCTCCCAAAAGG
AACTTATGCAAAACTTCAAGCAGATGGGATTGGCTTTTCAGACATACCCAATCACAAGGC
TGTCCTTGAAACAAGACTACGCCAGCATGCCACTCTTTCTCAAGATGATGTCCTGATCGT
GAACCATGGGGAGTTGACATACAAGTTAAAGGTTCTTGAGTTAAAACCATCCTCAAGTAT
ATCTGTCCTGGAAACAGATATTGAGGTTGATATAGTGGGTCCTGATTCGGTTTCAGGGAG
GACAAATCAGCAGTTCCTGAAACCACTGGAATTTGGAAAATCAGAGACTGGAATGGTTGA
GGAAGGTAATTATGTGTATTACAAGTTCTCAATGGATGGTGACATCTTGGGGATAATTGC
TTCTGGGGATGCAAGAATTGAGGTAAAGATAGAAGCAGAGTCAGATGGTGGAGATACTGA
TCTTTACATTTCGAGACATCCCCTCATATTCCCAAATAGGCACCAACATGAATGGTCTTC
TCATGATGTGGGTTCAAAAACTTTGATACTGAGTCATAAGGATCAGAGCTTGGAAGCAGG
TACTTTTAGCATTGGTGTCTATGGCTTTAAAGGAACAACAAAGTACCAGATATCGGTAAG
TGTTCAAGATAACTTAAACCACAAGGTGGGTCAACAAGCTACATCTTCTTCATCTATGGA
GGTGGATACCGTAGAGTGTAGGAATTGCAAGCATTATATACCCAGTAGATCTATAGCACT
GCATGAGGCCTATTGTAGCAGACATAACATCATTTGTCCACATGCTGGTTGTGGGGTTGT
TCTCAGGGTGGCAGAGGCCAAGAACCATGTGCATTGTGACAAATGTGGGCAAGCCCTTCA
AAGGGGAGAGATGGAGAAGCACATGAAAGTGTTCCATGAACCACTTCACTGCCCATGCGG
GGTAGTACTTGAGAAGGAACTAATGGTGCAACACCAGGCTTCAGCGTGCCCTCTTCGCCT
AATAACATGCCGGTTTTGTGGTGACATGGTTCAGGCTGGGAGTTCTGCCATGGACGTCCG
AGACCGATTAAGAGGACTGTCTGAGCATGAAAGCATCTGTGGCTCAAGAACCGCCCCATG
CGACTCATGTGGGCGTTCCGTCATGCTAAAAGAGATGGACATCCACCAAATAGCCGTTCA
TCAGAGGAACTAATGCCACGCATGAGCTCTCACTCCTATACTCATTCATGGCCCCTAATG
CTGCTTAGGGCACAAGACCTGGAAATTCTGCCATAAACATCAGCATGAACCAGATGCTTT
CAGCATATATCCCATCACTCTGCATCAGCATATATCCAACTTTGATATCGTGGTTCAGCC
TTGATATGCATGTAATTCTAATATTATTATTATTTTTTCCTGGAAATCCTGGTGTGATGT
ATGAAACGCCAATCTGGATCAATCAACTT