Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g01030.t01
CDS Infomation

cds chromosome:12X:12:5957378:5961665:-1 gene:VIT_12s0059g01030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGCCATTGGAGGAGATCCCAGTCGATCTGGTACGCCAAGTTCAGATCTTGCTTCGC
AAGGACGCCAATCTCTCGTCCTACGATCCTCACGACCCATCTCTTCCAAATCTCCCTTCG
ACCGACCAAGTAATTGCCGAGTTCGATCCGTCTCCACCACACCTCCGGTGCGCCAACTGC
AGGGGAAGGCTACCCAGAGGGTTGCAGTCGATCATATGCGTATACTGTGGGCTAGAGCAG
AAAGGAGAGGTTGCTCCAGAGCCGATTTTGTTCAAGAACACAGCTGGGTTTCGTTGGTTG
CTCGAGACATTGGACTTGGATGGATCGGAGGCCTTGGGACCATCAACTGTAGTAAAAGAA
GCAAGCAGAGGACGGAGTGCTTTGAAAGATGAAGGTTCCTTGTCAGATCTCTTAGATCTG
GAAATAAAATGGACTTCTGAGTCAGAGAAACTGGGGGCTGGTGTTTCGAATGAGGCATCA
GTTCGGAGTAAAAGTCCTTTGAACTTGGCTGGAGTTGACCTAGACAACTTTTTGTCTGAA
GCTAGGAGAGATACTGTTATTAAGGCATCTGAAGAACAATTTGCAGCAACAAAAGAGATA
AGAAGTAAGGAAAGCAATGCATTGCAAGGTCATGAAAATCTTAGTTTGTTTGAGAATGTT
CATCCTTCTGAAACAGTTGTGAGGCCTGCAGAAGACAAGAATAGTGCTGCTTTCTCTGGT
TGGGAGGCAGAGTTCCAAAATGCTAATTCTGAAAGTGTTCATGAAGGCTCCAAAGAGTTT
GACCCTTTTGTGGGTTCCACAGTTGATCTTTCATCCCACATGGATGCAGTCTTTGGATCT
GGAAAAGATATAAATAGTGCTCATGTGAGTGATGACACAACTCCTGCTTCCAGGACTAAT
GATTGGATTCAAGATGACTTGTATAAAAATTTGAACTCCAAGGTACCAGCCCATGTGGGA
CAAGTTGATTCAACCATCCAAGCTGAGGATGCTCAAAATTTAGCTGGTCCCTCTTCCACA
AGAAATGATTGGTTTCAAGATGATCAATGGAAAAACAGCAGTGCAAAATCAACTGATAAT
AAGATCGCGCTTGGAAAAAATGATAATTTGTTTGATGCCTGGAATGATTTTCCAAGTTCC
TCTACTTCACAAGATCCTTTTAGAAGTTCTTGGAAACACAATAATGGTAGTTCTCTGACA
CCTTCTGTTGAACAGACTTCTGAACCAAATCTGTTGAGCTCAACTAGTAACTTGCAAGAG
ATGGAGTTTGGTAACTTCTCACAGCAGGAGGACCTTTCTTCTGGGGCAGATAACAATCAA
AATGATTCTTCCACAGTTAGCAATATGCTTCCAGAAGCTTCTGATTCAAACAGGAAAGCT
GATACAAGTGCAGAAGATGGGGGAAGGTTAGAACAATCTGTGAAAGATGAAGATATTCTC
GATGCAACCACTAGTTCGAAGGCTGAAGACGTAGAGATGTTGATGTCACAAATGCATGAT
CTCTCTTTTATGCTGGAAAGCAAGCTCTCGGTCCCACAAAGCTAG

Peptide Sequence

PEP ID

VIT_12s0059g01030.t01
PEP Infomation

pep chromosome:12X:12:5957378:5961665:-1 gene:VIT_12s0059g01030 transcript:VIT_12s0059g01030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPLEEIPVDLVRQVQILLRKDANLSSYDPHDPSLPNLPSTDQVIAEFDPSPPHLRCANC
RGRLPRGLQSIICVYCGLEQKGEVAPEPILFKNTAGFRWLLETLDLDGSEALGPSTVVKE
ASRGRSALKDEGSLSDLLDLEIKWTSESEKLGAGVSNEASVRSKSPLNLAGVDLDNFLSE
ARRDTVIKASEEQFAATKEIRSKESNALQGHENLSLFENVHPSETVVRPAEDKNSAAFSG
WEAEFQNANSESVHEGSKEFDPFVGSTVDLSSHMDAVFGSGKDINSAHVSDDTTPASRTN
DWIQDDLYKNLNSKVPAHVGQVDSTIQAEDAQNLAGPSSTRNDWFQDDQWKNSSAKSTDN
KIALGKNDNLFDAWNDFPSSSTSQDPFRSSWKHNNGSSLTPSVEQTSEPNLLSSTSNLQE
MEFGNFSQQEDLSSGADNNQNDSSTVSNMLPEASDSNRKADTSAEDGGRLEQSVKDEDIL
DATTSSKAEDVEMLMSQMHDLSFMLESKLSVPQS

Transcript Sequence

Transcript ID

VIT_12s0059g01030.t01
Transcript Infomation

cdna chromosome:12X:12:5957378:5961665:-1 gene:VIT_12s0059g01030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTCATCGACACGTGGCACCACCTTCCCCCTAAGAGAGCCGAATTGCAGAGAACTCGATC
AGAAACCCTAGGTCTATCACAGATCGAAAGAGAGGGAGAGGTCAGGAACCCTAGCTCATG
GTGATGCCTTGAAGACAATGGCGCCATTGGAGGAGATCCCAGTCGATCTGGTACGCCAAG
TTCAGATCTTGCTTCGCAAGGACGCCAATCTCTCGTCCTACGATCCTCACGACCCATCTC
TTCCAAATCTCCCTTCGACCGACCAAGTAATTGCCGAGTTCGATCCGTCTCCACCACACC
TCCGGTGCGCCAACTGCAGGGGAAGGCTACCCAGAGGGTTGCAGTCGATCATATGCGTAT
ACTGTGGGCTAGAGCAGAAAGGAGAGGTTGCTCCAGAGCCGATTTTGTTCAAGAACACAG
CTGGGTTTCGTTGGTTGCTCGAGACATTGGACTTGGATGGATCGGAGGCCTTGGGACCAT
CAACTGTAGTAAAAGAAGCAAGCAGAGGACGGAGTGCTTTGAAAGATGAAGGTTCCTTGT
CAGATCTCTTAGATCTGGAAATAAAATGGACTTCTGAGTCAGAGAAACTGGGGGCTGGTG
TTTCGAATGAGGCATCAGTTCGGAGTAAAAGTCCTTTGAACTTGGCTGGAGTTGACCTAG
ACAACTTTTTGTCTGAAGCTAGGAGAGATACTGTTATTAAGGCATCTGAAGAACAATTTG
CAGCAACAAAAGAGATAAGAAGTAAGGAAAGCAATGCATTGCAAGGTCATGAAAATCTTA
GTTTGTTTGAGAATGTTCATCCTTCTGAAACAGTTGTGAGGCCTGCAGAAGACAAGAATA
GTGCTGCTTTCTCTGGTTGGGAGGCAGAGTTCCAAAATGCTAATTCTGAAAGTGTTCATG
AAGGCTCCAAAGAGTTTGACCCTTTTGTGGGTTCCACAGTTGATCTTTCATCCCACATGG
ATGCAGTCTTTGGATCTGGAAAAGATATAAATAGTGCTCATGTGAGTGATGACACAACTC
CTGCTTCCAGGACTAATGATTGGATTCAAGATGACTTGTATAAAAATTTGAACTCCAAGG
TACCAGCCCATGTGGGACAAGTTGATTCAACCATCCAAGCTGAGGATGCTCAAAATTTAG
CTGGTCCCTCTTCCACAAGAAATGATTGGTTTCAAGATGATCAATGGAAAAACAGCAGTG
CAAAATCAACTGATAATAAGATCGCGCTTGGAAAAAATGATAATTTGTTTGATGCCTGGA
ATGATTTTCCAAGTTCCTCTACTTCACAAGATCCTTTTAGAAGTTCTTGGAAACACAATA
ATGGTAGTTCTCTGACACCTTCTGTTGAACAGACTTCTGAACCAAATCTGTTGAGCTCAA
CTAGTAACTTGCAAGAGATGGAGTTTGGTAACTTCTCACAGCAGGAGGACCTTTCTTCTG
GGGCAGATAACAATCAAAATGATTCTTCCACAGTTAGCAATATGCTTCCAGAAGCTTCTG
ATTCAAACAGGAAAGCTGATACAAGTGCAGAAGATGGGGGAAGGTTAGAACAATCTGTGA
AAGATGAAGATATTCTCGATGCAACCACTAGTTCGAAGGCTGAAGACGTAGAGATGTTGA
TGTCACAAATGCATGATCTCTCTTTTATGCTGGAAAGCAAGCTCTCGGTCCCACAAAGCT
AGATGGTTTTACATGATAAGATAGACGATTGAAACACCCAGGTGTTGTCCTTGAGCTTTT
ATTACATAATGTGCTTTGTCCAATATGTCTTACGGCCACATATTTGATCCTCCAGTTGTA
ATCACTGAGCTGTTTTCTAGGGTTTTTTCCCCCTATAATTTTGTATTCTTTAATGTATTT
ACTGGCTTTCTGAGTTTGATCCTTCTGCCGTAATGTTGAATAGCTAGATTATTAGGCATA