Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g00990.t01
CDS Infomation

cds chromosome:12X:12:5850400:5876958:1 gene:VIT_12s0059g00990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCAAACCAATTCCTTCACCTCTCTATGAAAAAATCCCCCAGAAAAACACACTCCAT
AGAGCCTCGGACGTCACCATTTTCTTCCTTCTCCTCTCTCTCCTTGCTTACCGTCTCCTC
TCCCTAAAAAACAATGGCTTCACTTGGCTCCTCGCCTTCCTCTGCGAGTCATGGTTCACC
TTTATTTGGATTCTTAACTTGAGCTCCAAATGGAATCCTGTGTCCTACAAAACATACCCT
GAGCGCCTTCTACAATGTTATCGAGTTGATGAGCTTCCTCCAGTGGACATGTTTGTGACA
GCTGCAGATCCCATGCTGGAACCCCCTATCATCACTGTAAATACTGTCCTCTCCTTGCTA
GCAGTTGACTATCCAGCTAACAAGCTTTCTTGCTATGTGTCCGATGATGGGGCTTCCCCT
CTCACCTTCTTCGCTCTCCTTGAAGCATCCAAGTTTGCTAAGCTTTGGGTTCCTTTCTGT
AAGAAGTATTGTATTCAACCTAGAGCTCCCTTCAGATACTTTTCCAGAGAGTTGTTACCA
TCCCATGGTAATTCAATGGAGTTCCTGCAAGAATACAGAAAGATAAAGGAAGAATATGAA
GAGCTTAGACGAAGAATTGAAGATGAAACCCTGAAGTCAATATCAAATGAGCTTAGTACC
GCAGAGTTTGTCGCTTTCTCAAATATAAAAAGGGGAAGCCATCCAACTATAATCAAGGTT
ATATTGGAGAACAAGGAGAGCCGCTCTGATGGGTTGCCACATCTAGTCTATGTATCCAGA
GAGAAGCATCCCAAGCATCCACACCATTACAAAGCGGGTGCCATGAATGTTCTGACCAGA
GTCTCTGGAGCTATGACAAATGCTCCTTTCATGCTGAACGTAGACTGTGATATGTACGCA
AACAATCCACAGATTTTTCATCATTCAATGTGTTTGCTCCTCAGTTCCAAGAATGAACAG
GACTGCGGGTTTGTTCAGACTCCACAATCCTTCTATGATGGACTAAAGGACGACCCATTT
GGAAATCAGTTTGGAGTTTTGTATAAGTATGTAGCAAGTGGAATAGCAGGGCTTCAAGGA
CCTCATTATTCTGGAACGGGATGTTTTCATCGAAGAAAAGTTATCTATGGGTTATGGCCA
GATGGAAGGATGGAGTTCAAAGGAAGAATTGGAAAATTAACAGACGAGAGATTAGAAAAA
ACATTCGGAAATTCAAAGGAATTCACAAAAACAGCTGCAAGGATTTTATCAGGGTTGAGC
GGGGTTTCGGATTGTCCATATGATCTTTCGAATCGGGTTGAGGCAGCACACCAAATTGCA
AGTTGCAGCTATGAGTATGGAGCTAACTGGGGTACAAAGATTGGTTGGTTATATGGAACT
ACAACAGAAGACATCCTCACAGGTATGAGGATACATGCAAGAGGTTGGAAATCCACAGAT
TGCCGGCCTGACCCTCCTGCATTTCTTGGGTGCGCACCCTCAGGCGGGCCTGCTGCACTT
ATCCAACAGAAGAGATGGGCCACTGGCCTCCTTGAGGTGCTGTTCAGCAAGAACAGCCCA
TTCATTATCACCTTCACTGCAAAGCTCCAATTTCGCCAATGCCTTGCATACATGTGGATT
CTTTCATGGGGTTTAAGGCCAATTCCGGAGCTTTATTATCTTGCTTTGCCAGCATATTGC
ATCATGGCCGGCTCACATTTCTTGCCCAATGTCCAAGACCCAGCTGTGTTGATACCGATA
TCCCTCTTTGTCAGTTACAATTTTCACACTCTATTGGAATACTGGGGGGCTGGATATTCA
ATCCGAGCATGCTGGAACAACTTGAGGATGTGGAGAATAACCGCAGTGACCGCATGGTTA
TTTGGATTTTTAAGCGTCATTCTGAAGCTCCTGGGGTTATCGGAGACCGTCTTTGAAGTT
ACAAAAAAAGACCAATCCACTACTCCTGGGGAGGGCAGTGACAAGGATGCTGGTCGGTTC
ACCTTTGATGGGTCTCTGATTTTTGTTCCGGCCACTACTCTTCTGTTGGTGCACCTGATG
GCACTTGTAACAGCCTTGTTAGGACTATTTGATCATGTCGAGATTGAATCAAGAATAGGG
GAGATAATATGTAGTGTGTGGGTGGTGCTATGCTTCTCGCCGTTTCTTAAAGGCTTGTTT
GGGAAAGGAAAATATGGGATACCCAAATCCACTATATGCAAGTCAGCAGCTTTGGCGTTT
CTTTTTTTTGCTTGCACTATTACAGTAAGAAAATGA

Peptide Sequence

PEP ID

VIT_12s0059g00990.t01
PEP Infomation

pep chromosome:12X:12:5850400:5876958:1 gene:VIT_12s0059g00990 transcript:VIT_12s0059g00990.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKPIPSPLYEKIPQKNTLHRASDVTIFFLLLSLLAYRLLSLKNNGFTWLLAFLCESWFT
FIWILNLSSKWNPVSYKTYPERLLQCYRVDELPPVDMFVTAADPMLEPPIITVNTVLSLL
AVDYPANKLSCYVSDDGASPLTFFALLEASKFAKLWVPFCKKYCIQPRAPFRYFSRELLP
SHGNSMEFLQEYRKIKEEYEELRRRIEDETLKSISNELSTAEFVAFSNIKRGSHPTIIKV
ILENKESRSDGLPHLVYVSREKHPKHPHHYKAGAMNVLTRVSGAMTNAPFMLNVDCDMYA
NNPQIFHHSMCLLLSSKNEQDCGFVQTPQSFYDGLKDDPFGNQFGVLYKYVASGIAGLQG
PHYSGTGCFHRRKVIYGLWPDGRMEFKGRIGKLTDERLEKTFGNSKEFTKTAARILSGLS
GVSDCPYDLSNRVEAAHQIASCSYEYGANWGTKIGWLYGTTTEDILTGMRIHARGWKSTD
CRPDPPAFLGCAPSGGPAALIQQKRWATGLLEVLFSKNSPFIITFTAKLQFRQCLAYMWI
LSWGLRPIPELYYLALPAYCIMAGSHFLPNVQDPAVLIPISLFVSYNFHTLLEYWGAGYS
IRACWNNLRMWRITAVTAWLFGFLSVILKLLGLSETVFEVTKKDQSTTPGEGSDKDAGRF
TFDGSLIFVPATTLLLVHLMALVTALLGLFDHVEIESRIGEIICSVWVVLCFSPFLKGLF
GKGKYGIPKSTICKSAALAFLFFACTITVRK

Transcript Sequence

Transcript ID

VIT_12s0059g00990.t01
Transcript Infomation

cdna chromosome:12X:12:5850400:5876958:1 gene:VIT_12s0059g00990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACACCATCTGCCCAACAAGGCAACTTTAAGCAATCCTCCTCCATTAGATGGCCAAACCAA
TTCCTTCACCTCTCTATGAAAAAATCCCCCAGAAAAACACACTCCATAGAGCCTCGGACG
TCACCATTTTCTTCCTTCTCCTCTCTCTCCTTGCTTACCGTCTCCTCTCCCTAAAAAACA
ATGGCTTCACTTGGCTCCTCGCCTTCCTCTGCGAGTCATGGTTCACCTTTATTTGGATTC
TTAACTTGAGCTCCAAATGGAATCCTGTGTCCTACAAAACATACCCTGAGCGCCTTCTAC
AATGTTATCGAGTTGATGAGCTTCCTCCAGTGGACATGTTTGTGACAGCTGCAGATCCCA
TGCTGGAACCCCCTATCATCACTGTAAATACTGTCCTCTCCTTGCTAGCAGTTGACTATC
CAGCTAACAAGCTTTCTTGCTATGTGTCCGATGATGGGGCTTCCCCTCTCACCTTCTTCG
CTCTCCTTGAAGCATCCAAGTTTGCTAAGCTTTGGGTTCCTTTCTGTAAGAAGTATTGTA
TTCAACCTAGAGCTCCCTTCAGATACTTTTCCAGAGAGTTGTTACCATCCCATGGTAATT
CAATGGAGTTCCTGCAAGAATACAGAAAGATAAAGGAAGAATATGAAGAGCTTAGACGAA
GAATTGAAGATGAAACCCTGAAGTCAATATCAAATGAGCTTAGTACCGCAGAGTTTGTCG
CTTTCTCAAATATAAAAAGGGGAAGCCATCCAACTATAATCAAGGTTATATTGGAGAACA
AGGAGAGCCGCTCTGATGGGTTGCCACATCTAGTCTATGTATCCAGAGAGAAGCATCCCA
AGCATCCACACCATTACAAAGCGGGTGCCATGAATGTTCTGACCAGAGTCTCTGGAGCTA
TGACAAATGCTCCTTTCATGCTGAACGTAGACTGTGATATGTACGCAAACAATCCACAGA
TTTTTCATCATTCAATGTGTTTGCTCCTCAGTTCCAAGAATGAACAGGACTGCGGGTTTG
TTCAGACTCCACAATCCTTCTATGATGGACTAAAGGACGACCCATTTGGAAATCAGTTTG
GAGTTTTGTATAAGTATGTAGCAAGTGGAATAGCAGGGCTTCAAGGACCTCATTATTCTG
GAACGGGATGTTTTCATCGAAGAAAAGTTATCTATGGGTTATGGCCAGATGGAAGGATGG
AGTTCAAAGGAAGAATTGGAAAATTAACAGACGAGAGATTAGAAAAAACATTCGGAAATT
CAAAGGAATTCACAAAAACAGCTGCAAGGATTTTATCAGGGTTGAGCGGGGTTTCGGATT
GTCCATATGATCTTTCGAATCGGGTTGAGGCAGCACACCAAATTGCAAGTTGCAGCTATG
AGTATGGAGCTAACTGGGGTACAAAGATTGGTTGGTTATATGGAACTACAACAGAAGACA
TCCTCACAGGTATGAGGATACATGCAAGAGGTTGGAAATCCACAGATTGCCGGCCTGACC
CTCCTGCATTTCTTGGGTGCGCACCCTCAGGCGGGCCTGCTGCACTTATCCAACAGAAGA
GATGGGCCACTGGCCTCCTTGAGGTGCTGTTCAGCAAGAACAGCCCATTCATTATCACCT
TCACTGCAAAGCTCCAATTTCGCCAATGCCTTGCATACATGTGGATTCTTTCATGGGGTT
TAAGGCCAATTCCGGAGCTTTATTATCTTGCTTTGCCAGCATATTGCATCATGGCCGGCT
CACATTTCTTGCCCAATGTCCAAGACCCAGCTGTGTTGATACCGATATCCCTCTTTGTCA
GTTACAATTTTCACACTCTATTGGAATACTGGGGGGCTGGATATTCAATCCGAGCATGCT
GGAACAACTTGAGGATGTGGAGAATAACCGCAGTGACCGCATGGTTATTTGGATTTTTAA
GCGTCATTCTGAAGCTCCTGGGGTTATCGGAGACCGTCTTTGAAGTTACAAAAAAAGACC
AATCCACTACTCCTGGGGAGGGCAGTGACAAGGATGCTGGTCGGTTCACCTTTGATGGGT
CTCTGATTTTTGTTCCGGCCACTACTCTTCTGTTGGTGCACCTGATGGCACTTGTAACAG
CCTTGTTAGGACTATTTGATCATGTCGAGATTGAATCAAGAATAGGGGAGATAATATGTA
GTGTGTGGGTGGTGCTATGCTTCTCGCCGTTTCTTAAAGGCTTGTTTGGGAAAGGAAAAT
ATGGGATACCCAAATCCACTATATGCAAGTCAGCAGCTTTGGCGTTTCTTTTTTTTGCTT
GCACTATTACAGTAAGAAAATGACATTAGTAAAAACTAAAAACCGTAACAATTTATTAAG
CATAATTGTTAGTCAAGTGTGTTATGACATGTATTATCCGGTT