Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0059g00880.t01
CDS Infomation

cds chromosome:12X:12:5678804:5681082:-1 gene:VIT_12s0059g00880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCAAAGGCAGTGGACTCTCCTTTGGGTCAGATCCAATCTTCTTCCTTCACAAACCA
ATAGTTATAAATTCATTTCCGGAGGATCACAGCAAGAGGTTTGCGGCCATGGATGCCACT
AAAAACCAGTCCACTACCACTATTCAATTCCCAGTCAACCTCAACTGTGCTCACCCAGAT
TCTCCGGTTCCCGACGACGAAAAGCCCAGAATTGTCGATGAGATGGACTTTTTTGCTGAT
AAAAACCGCGACTCCAAGCCACCCACTACAGATAACAAGAACTCTCCCTATTATTTCAAT
GTAAACACTGGCTTGCACCTTCTTACTGCTAATACCAGCAGCGATCAGTCCATGGTGGAT
GATGGGATGTCGCCCCCGAACGTGGATGACAAGCGAGTTAAGAATGAGCTGGTGGTTCTT
CAAGCTGAGATCGAGCGGATGCACGCAGAGAATGAGCGATTGAGGAGCATGCTGAACCAG
GTTACTAACAACTACAACGCACTCCAGGTGCATATGGTGGCACTGATGCAAGATCAGAAG
GCGGAGAACAATGAAGAACATGATCAGAAGCATAGTGGTAATAATAACGGAGGAGTTGTG
GTGCCTAGACAGTTTATTGATCTTGGCCTTGCTGCTAAAGCTGAAGTCGAAGAGCCTTCG
CTGTCTTCATCAGAAGGAAGGAGCGGTGACCGATCCGGATCACCCATAAACAACGGAGAA
GTGGGTTCGAAGGAGTTGGAGCTGAGGAAGAATGAGAAGAAGGAATACAGCAGTGGAATT
GGAAGAGAAGAAAGCCCAGATCAAGGATCCCAATGGGGAGCTAACAAGGTTCCCAGGTTG
AATCCCTCCAAAAATGTTGATCAAACCGAAGCAACCATGAGGAAAGCCCGTGTCTCAGTT
CGAGCACGATCTGAAGCACCTATGATCACTGATGGATGCCAATGGAGGAAGTATGGGCAG
AAGATGGCAAAGGGAAATCCATGCCCTCGAGCTTATTATCGATGCACCATGGCTGCAGGT
TGTCCGGTCCGCAAACAAGTGCAAAGATGCGCGGAGGATCGGAGTATTCTCATCACCACA
TATGAAGGTAATCACAACCACCCACTGCCGCCTGCTGCCATGGCAATGGCGTCGACCACT
TCGTCTGCAGCGCGAATGCTACTGTCCGGGTCAATGCCCAGTGCTGATGGGCTAATGAAC
TCCAATTTCCTCGCCAGGACCGTCCTTCCTTGCTCCTCTAGCATGGCTACTATATCAGCT
TCAGCCCCATTCCCTACTGTTACATTAGACCTTACTCAAAACCCCAACCCCTTACAATTC
CAAAGGCCACCAAGCCAATTCTATGTCCCCTCCCCCAACCCAACTCAGAACCTCGCCGGG
CCGGCCGCTGCAACACCCTCTTCACTGCTGCCTCAAATCTTCAATCAAGCCCTTTACAAT
CAGTCAAAGTTCTCTGGCCTGCAAATGTCTCAAGACATGGAAGCAGCTCAATTACCGACC
CACCACCAACCATCATCACAGCAACAGTCACAGCAGAACTCTCTGGCTGAAACGGTGAGT
GCAGCAACTGCTGCCATTACAGCTGACCCCAACTTCACTGCAGCACTAGCGGCTGCCATC
ACCTCCATTATTGGTGGTGCTCAACCTCAACCAAACAGTAGTACTAACAATAACGCCAAC
ACCACAGTCCCCACCACCAGCAACAGTGGCAACATTACTACTAGCAACAGCAATAGTAAT
GGCAGCAACAAACTCTGCAATTCAAAATTTCCAGGGAACTGA

Peptide Sequence

PEP ID

VIT_12s0059g00880.t01
PEP Infomation

pep chromosome:12X:12:5678804:5681082:-1 gene:VIT_12s0059g00880 transcript:VIT_12s0059g00880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKGSGLSFGSDPIFFLHKPIVINSFPEDHSKRFAAMDATKNQSTTTIQFPVNLNCAHPD
SPVPDDEKPRIVDEMDFFADKNRDSKPPTTDNKNSPYYFNVNTGLHLLTANTSSDQSMVD
DGMSPPNVDDKRVKNELVVLQAEIERMHAENERLRSMLNQVTNNYNALQVHMVALMQDQK
AENNEEHDQKHSGNNNGGVVVPRQFIDLGLAAKAEVEEPSLSSSEGRSGDRSGSPINNGE
VGSKELELRKNEKKEYSSGIGREESPDQGSQWGANKVPRLNPSKNVDQTEATMRKARVSV
RARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRSILITT
YEGNHNHPLPPAAMAMASTTSSAARMLLSGSMPSADGLMNSNFLARTVLPCSSSMATISA
SAPFPTVTLDLTQNPNPLQFQRPPSQFYVPSPNPTQNLAGPAAATPSSLLPQIFNQALYN
QSKFSGLQMSQDMEAAQLPTHHQPSSQQQSQQNSLAETVSAATAAITADPNFTAALAAAI
TSIIGGAQPQPNSSTNNNANTTVPTTSNSGNITTSNSNSNGSNKLCNSKFPGN

Transcript Sequence

Transcript ID

VIT_12s0059g00880.t01
Transcript Infomation

cdna chromosome:12X:12:5678804:5681082:-1 gene:VIT_12s0059g00880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCAAAGGCAGTGGACTCTCCTTTGGGTCAGATCCAATCTTCTTCCTTCACAAACCA
ATAGTTATAAATTCATTTCCGGAGGATCACAGCAAGAGGTTTGCGGCCATGGATGCCACT
AAAAACCAGTCCACTACCACTATTCAATTCCCAGTCAACCTCAACTGTGCTCACCCAGAT
TCTCCGGTTCCCGACGACGAAAAGCCCAGAATTGTCGATGAGATGGACTTTTTTGCTGAT
AAAAACCGCGACTCCAAGCCACCCACTACAGATAACAAGAACTCTCCCTATTATTTCAAT
GTAAACACTGGCTTGCACCTTCTTACTGCTAATACCAGCAGCGATCAGTCCATGGTGGAT
GATGGGATGTCGCCCCCGAACGTGGATGACAAGCGAGTTAAGAATGAGCTGGTGGTTCTT
CAAGCTGAGATCGAGCGGATGCACGCAGAGAATGAGCGATTGAGGAGCATGCTGAACCAG
GTTACTAACAACTACAACGCACTCCAGGTGCATATGGTGGCACTGATGCAAGATCAGAAG
GCGGAGAACAATGAAGAACATGATCAGAAGCATAGTGGTAATAATAACGGAGGAGTTGTG
GTGCCTAGACAGTTTATTGATCTTGGCCTTGCTGCTAAAGCTGAAGTCGAAGAGCCTTCG
CTGTCTTCATCAGAAGGAAGGAGCGGTGACCGATCCGGATCACCCATAAACAACGGAGAA
GTGGGTTCGAAGGAGTTGGAGCTGAGGAAGAATGAGAAGAAGGAATACAGCAGTGGAATT
GGAAGAGAAGAAAGCCCAGATCAAGGATCCCAATGGGGAGCTAACAAGGTTCCCAGGTTG
AATCCCTCCAAAAATGTTGATCAAACCGAAGCAACCATGAGGAAAGCCCGTGTCTCAGTT
CGAGCACGATCTGAAGCACCTATGATCACTGATGGATGCCAATGGAGGAAGTATGGGCAG
AAGATGGCAAAGGGAAATCCATGCCCTCGAGCTTATTATCGATGCACCATGGCTGCAGGT
TGTCCGGTCCGCAAACAAGTGCAAAGATGCGCGGAGGATCGGAGTATTCTCATCACCACA
TATGAAGGTAATCACAACCACCCACTGCCGCCTGCTGCCATGGCAATGGCGTCGACCACT
TCGTCTGCAGCGCGAATGCTACTGTCCGGGTCAATGCCCAGTGCTGATGGGCTAATGAAC
TCCAATTTCCTCGCCAGGACCGTCCTTCCTTGCTCCTCTAGCATGGCTACTATATCAGCT
TCAGCCCCATTCCCTACTGTTACATTAGACCTTACTCAAAACCCCAACCCCTTACAATTC
CAAAGGCCACCAAGCCAATTCTATGTCCCCTCCCCCAACCCAACTCAGAACCTCGCCGGG
CCGGCCGCTGCAACACCCTCTTCACTGCTGCCTCAAATCTTCAATCAAGCCCTTTACAAT
CAGTCAAAGTTCTCTGGCCTGCAAATGTCTCAAGACATGGAAGCAGCTCAATTACCGACC
CACCACCAACCATCATCACAGCAACAGTCACAGCAGAACTCTCTGGCTGAAACGGTGAGT
GCAGCAACTGCTGCCATTACAGCTGACCCCAACTTCACTGCAGCACTAGCGGCTGCCATC
ACCTCCATTATTGGTGGTGCTCAACCTCAACCAAACAGTAGTACTAACAATAACGCCAAC
ACCACAGTCCCCACCACCAGCAACAGTGGCAACATTACTACTAGCAACAGCAATAGTAAT
GGCAGCAACAAACTCTGCAATTCAAAATTTCCAGGGAACTGATCATCATCATCATCATCA
AGTAATTCATTCTCCCTCAATTTTTGTTTTTTTTTGGGTTGGGAAATGGGATAGTACAAT
TTTTTTGTTATCAGAATAATGTGATCCTAGTTGTTTGTCAATACA